Affinage

MED30

Mediator of RNA polymerase II transcription subunit 30 · UniProt Q96HR3

Length
178 aa
Mass
20.3 kDa
Annotated
2026-06-10
32 papers in source corpus 14 papers cited in narrative 14 extracted findings
Cross-family judge vs UniProt: Affinage preferred faithfulness: 5/5 claims corpus-supported (100%)

Mechanistic narrative

Synthesis pass · prose summary of the discoveries below

MED30 (TRAP25) is a metazoan-specific integral subunit of the Mediator complex that couples transcriptional activators to RNA polymerase II and is required for both basal and activator-dependent transcription (PMID:11909976). Structurally, MED30 associates with exposed surfaces of MED14 and MED17 to form the proximal part of the Mediator tail module that engages activators, thereby anchoring the tail to the Mediator core (PMID:33902108). This architectural role underlies its function in maintaining complex integrity: in vivo ablation of MED30 destabilizes head, middle, and tail module subunits while sparing the kinase module, establishing MED30 as essential for the structural stability of the overall Mediator complex (PMID:34506481). Through this Mediator-dependent activity, MED30 controls tissue-specific transcriptional programs — loss in cardiomyocytes disrupts the gene networks driving oxidative phosphorylation and mitochondrial integrity, causing mitochondrial cardiomyopathy (PMID:34506481, PMID:22106289). In cancer contexts, elevated MED30 acts upstream of MYC, redirecting MYC to novel genomic regulatory sites and inducing new enhancers to drive oncogenic transcription (PMID:38766212), and MED30 is required to sustain endogenous MYC expression (PMID:41965876).

Mechanistic history

Synthesis pass · year-by-year structured walk · 12 steps
  1. 2002 High

    Established that MED30 is a genuine integral Mediator subunit whose presence is required for the complex to support transcription, answering whether this uncharacterized protein had a functional role in PolII transcription.

    Evidence Antibody immunodepletion of HeLa nuclear extract with reconstitution and in vitro transcription assays

    PMID:11909976

    Open questions at the time
    • Did not localize MED30 within the complex architecture
    • Did not define which activators or target genes depend on MED30
  2. 2011 High

    Connected MED30-dependent Mediator function to a specific physiological transcriptional program, showing it drives the metabolic gene network for oxidative phosphorylation and mitochondrial integrity.

    Evidence ENU hypomorphic missense mouse model with expression profiling and ketogenic diet rescue

    PMID:22106289

    Open questions at the time
    • A hypomorph does not reveal the full null phenotype
    • Did not address how MED30 selectively controls metabolic gene programs
  3. 2021 High

    Resolved where MED30 sits in the Mediator complex, showing it anchors the activator-binding proximal tail module to the core via MED14 and MED17.

    Evidence Cryo-EM of reconstituted 50-subunit human Mediator-PIC

    PMID:33902108

    Open questions at the time
    • Static structure does not capture dynamics of activator engagement
    • Does not show which activators bind through the MED30-containing tail surface in vivo
  4. 2021 High

    Demonstrated in vivo that MED30 is required for the structural stability of the entire Mediator core, distinguishing its scaffolding role from the dispensable kinase module.

    Evidence Constitutive and inducible cardiomyocyte-specific knockout mice with western blot quantification of subunits and RNAseq

    PMID:34506481

    Open questions at the time
    • Mechanism of how MED30 loss propagates to destabilize distal modules not defined
    • Cardiomyocyte-specific; generality to other tissues untested
  5. 2014 Medium

    Tested whether MED30-dependent Mediator activity is co-opted by viral transcription, showing it is needed for HIV-1 transcript elongation/splicing and Tat-induced transcription.

    Evidence siRNA knockdown in HIV-1-infected cells with RT-PCR transcript readouts

    PMID:25100719

    Open questions at the time
    • No rescue experiment to confirm specificity
    • Direct interaction with Tat or the viral promoter not established
  6. 2015 Medium

    Implicated MED30 dosage in tumor cell behavior, linking its overexpression to proliferation, invasion, and EMT gene induction in gastric cancer.

    Evidence Gain- and loss-of-function in gastric cancer lines with SCID mouse tumorigenicity assays

    PMID:26110885

    Open questions at the time
    • Did not identify the direct transcriptional targets driving the phenotype
    • Single tumor type and lab
  7. 2019 Medium

    Revealed a chromatin-organizing function, showing the Mediator MED30 subunit directs cohesin (Nipped-B/Rad21) specifically to gene promoters.

    Evidence Genome-wide ChIP-seq with perturbation in Drosophila cells

    PMID:30796039

    Open questions at the time
    • Demonstrated in Drosophila; human conservation untested
    • Molecular basis of promoter-specific cohesin recruitment unclear
  8. 2020 Medium

    Placed MED30 within stress-responsive transcriptional circuits, showing HIF1α/p53-dependent induction and reciprocal modulation of p53 in glioblastoma.

    Evidence Promoter element mapping, gain/loss-of-function in GBM lines, proliferation/migration and temozolomide sensitivity assays

    PMID:32705436

    Open questions at the time
    • Mechanism by which MED30 modulates p53 protein levels not defined
    • Opposing proliferation vs migration effects not mechanistically reconciled
  9. 2022 Medium

    Established a required role for MED30 in pancreatic beta cell survival, linking enhancer-driven MED30 expression to viability.

    Evidence CRISPR enhancer deletion at the SLC30A8 locus in human EndoC-βH3 cells with viability assays

    PMID:38661000

    Open questions at the time
    • Transcriptional targets mediating survival not identified
    • Single cell model
  10. 2024 Medium

    Defined an oncogenic mechanism placing MED30 upstream of MYC, showing its overexpression redirects MYC genomic binding and creates new enhancers to drive tumor growth.

    Evidence ChIP-seq for Mediator and MYC, transcriptomics, epigenetic profiling, and xenografts with MYC knockdown rescue (preprint)

    PMID:38766212

    Open questions at the time
    • Preprint not yet peer-reviewed
    • Mechanism by which excess MED30 reshapes MYC site selection unresolved
  11. 2024 Medium

    Used genetic epistasis to show MED27's role in Mediator integrity is independent of MED30, refining the wiring of tail-module subunit dependencies.

    Evidence MED30 overexpression in MED27-knockout mouse hearts with western blot for subunit levels

    PMID:39209248

    Open questions at the time
    • Does not establish MED30's own independent integrity requirements relative to MED27
    • Negative result; no positive rescue partner identified
  12. 2026 Low

    Confirmed unbiasedly that MED30 sustains endogenous MYC expression, generalizing its MYC-activating role beyond solid tumors to multiple myeloma.

    Evidence Genome-wide CRISPR screen with endogenous MYC reporter and sgRNA validation

    PMID:41965876

    Open questions at the time
    • Limited mechanistic follow-up specific to MED30
    • Does not distinguish direct from Mediator-wide effect on MYC

Open questions

Synthesis pass · forward-looking unresolved questions
  • How MED30's structural anchoring of the tail module is translated into selective activator engagement and gene-specific program control across tissues remains unresolved.
  • No defined set of activators that bind through the MED30 tail surface
  • Mechanism of context-specific target selection (metabolic vs oncogenic programs) unknown

Mechanism profile

Synthesis pass · controlled-vocabulary classification · explore literature graph →
Molecular activity
GO:0005198 structural molecule activity 2 GO:0140110 transcription regulator activity 2 GO:0060090 molecular adaptor activity 1
Localization
GO:0005634 nucleus 2
Pathway
R-HSA-74160 Gene expression (Transcription) 2 R-HSA-4839726 Chromatin organization 1
Partners
Complex memberships
Mediator complex

Evidence

Reading pass · 14 per-paper findings extracted from the source corpus
Year Finding Method Journal Conf PMIDs
2002 TRAP25 (MED30) was identified as a previously uncharacterized integral subunit of the human TRAP/Mediator complex that is metazoan-specific. Antibody-mediated immunodepletion of TRAP25 quantitatively removed essentially all TRAP/Mediator components from HeLa nuclear extract without affecting RNA polymerase II or general transcription factors, demonstrating MED30 is required for both basal and activator-dependent transcription. Adding back purified TRAP/Mediator restored both activities, and simultaneous depletion of TRAP/Mediator and TFIID required addition of both TBP/TAFIIs and TRAP/Mediator for rescue, establishing that TAFIIs and Mediator are jointly required for transcription. Antibody immunodepletion of HeLa nuclear extract, reconstitution with purified TRAP/Mediator, in vitro transcription assay Molecular and cellular biology High 11909976
2021 Cryo-EM structure of the human Mediator-RNA polymerase II pre-initiation complex revealed that metazoan subunits MED27-MED30 associate with exposed regions in MED14 and MED17 to form the proximal part of the Mediator tail module, which binds transcriptional activators. MED30 thus structurally anchors the tail module to the Mediator core. Cryo-electron microscopy of reconstituted 50-subunit human Mediator-PIC complex Nature High 33902108
2021 Cardiomyocyte-specific deletion of MED30 (constitutive or inducible) in mice caused rapid cardiac defects and lethality. Critically, ablation of MED30 destabilized the majority of Mediator core subunits (head, middle, tail modules) while the kinase module was preserved, demonstrating MED30 is essential for the structural stability of the overall Mediator complex in vivo. RNAseq identified cardiac transcriptional networks controlled by MED30-dependent Mediator. Conditional knockout mouse models (constitutive and inducible cardiomyocyte-specific Cre), western blot quantification of Mediator subunit levels, RNAseq PLoS genetics High 34506481
2011 A hypomorphic missense mutation in Med30 in mice caused progressive mitochondrial cardiomyopathy with lethality after weaning. Expression profiling revealed pleiotropic downregulation of cardiac genes required for oxidative phosphorylation and mitochondrial integrity, establishing a mechanistic connection between MED30-dependent Mediator function and induction of the metabolic program for oxidative phosphorylation and fatty acid oxidation. ENU-generated hypomorphic mouse missense mutation, expression profiling, dietary intervention (ketogenic diet rescue) Proceedings of the National Academy of Sciences of the United States of America High 22106289
2024 MED30 overexpression/amplification (co-amplified with MYC in cancers) recruits additional Mediator components and redirects MYC binding to a novel subset of genomic regulatory sites, alters epigenetic marks, and induces formation of new enhancers driving oncogenic target gene expression. In vivo, MED30 overexpression promotes PDAC tumor growth, and this is attenuated by MYC knockdown, placing MED30 upstream of MYC in this oncogenic transcriptional program. Transcriptional profiling of MYC/MED30 single and double overexpression, ChIP-seq for Mediator components and MYC binding sites, epigenetic mark profiling, in vivo xenograft models with MYC knockdown rescue Research squarepreprint Medium 38766212
2014 siRNA-mediated knockdown of MED30 in HIV-1-infected cells significantly impaired viral replication at a post-integration step, specifically affecting the formation of unspliced viral transcripts, and compromised HIV transcription induced by Tat. MED30 knockdown thus reduces HIV-1 transcription at the level of transcript elongation/splicing. siRNA knockdown in HIV-1-infected cells, RT-PCR for early and unspliced viral transcripts, Tat-induced transcription assay The Journal of biological chemistry Medium 25100719
2015 MED30 overexpression in gastric cancer cells increased proliferation, migration, and invasion, whereas MED30 knockdown inhibited these effects and significantly reduced tumorigenicity in SCID mice. MED30 also promoted expression of epithelial-mesenchymal transition (EMT)-related genes. Overexpression and siRNA knockdown in gastric cancer cell lines, proliferation/migration/invasion assays, SCID mouse tumorigenicity assay, EMT gene expression analysis PloS one Medium 26110885
2019 In Drosophila cells, the MED30 subunit of the Mediator complex directs Nipped-B and Rad21 (cohesin subunit) to gene promoters, as shown by genome-wide ChIP-seq. This is distinct from the role of SA and Fs(1)h (BRD4) in directing cohesin to enhancers, indicating that MED30 mediates promoter-specific cohesin recruitment. Genome-wide ChIP-seq in Drosophila cells for cohesin subunits (Nipped-B, SA, SMC1, Rad21) combined with MED30 perturbation data Genome research Medium 30796039
2022 CRISPR-Cas9-mediated deletion of enhancer regions at the SLC30A8 locus reduced MED30 expression, and subsequent loss of MED30 markedly reduced pancreatic beta cell viability, establishing a required role for MED30 in beta cell survival. CRISPR-Cas9 enhancer deletion in human EndoC-βH3 cells, cell viability assays after MED30 loss FASEB journal Medium 38661000
2020 MED30 is induced in glioblastoma cells under hypoxia and nutrient deprivation in a HIF1α- and p53-dependent manner, with functional HREs and a p53 binding site identified in the MED30 promoter. MED30 overexpression promoted cell proliferation while reducing migration in GBM cell lines; knockdown had the opposite effects and conferred resistance to temozolomide. MED30 also modulated p53 protein levels in vitro. Promoter analysis (HRE and p53 binding site identification), overexpression and siRNA knockdown in GBM cell lines, proliferation and migration assays, temozolomide sensitivity assays, p53 western blot Cellular and molecular neurobiology Medium 32705436
2024 Overexpression of MED30 failed to restore protein levels of Mediator subunits in MED27-deficient cardiomyocytes, demonstrating that MED27's role in maintaining Mediator complex integrity is independent of MED30 (negative epistasis result). MED30 overexpression in MED27 cardiomyocyte-specific knockout mouse hearts, western blot for Mediator subunit levels Life sciences Medium 39209248
2017 siRNA-mediated knockdown of MED30 in clear cell renal cell carcinoma cell lines (ACHN and A-498) significantly decreased proliferation, migration, and invasion. siRNA knockdown in ccRCC cell lines, proliferation, migration, and invasion assays Annals of diagnostic pathology Low 29661722
2017 siRNA-mediated knockdown of MED30 in bladder cancer cell lines (T24 and TCCSUP) reduced proliferation, migration, and invasion despite higher MED30 expression being associated with better patient survival at the clinical level. siRNA knockdown in bladder cancer cell lines, proliferation, migration, and invasion assays Anticancer research Low 29187445
2026 Genome-wide CRISPR loss-of-function screen in multiple myeloma cells identified MED30 (Mediator complex subunit) as an activator of endogenous MYC expression; functional validation confirmed that MED30 loss significantly reduced MYC protein levels. Genome-wide CRISPR-Cas9 screen with GFP-tagged endogenous MYC reporter, sgRNA validation in MM cell lines Scientific reports Low 41965876

Source papers

Stage 0 corpus · 32 papers · ranked by NIH iCite citations
Year Title Journal Citations PMID
2007 High-resolution aCGH and expression profiling identifies a novel genomic subtype of ER negative breast cancer. Genome biology 253 17925008
2002 Requirement of TRAP/mediator for both activator-independent and activator-dependent transcription in conjunction with TFIID-associated TAF(II)s. Molecular and cellular biology 111 11909976
2021 Structure of the human Mediator-RNA polymerase II pre-initiation complex. Nature 107 33902108
2014 The roles of mediator complex in cardiovascular diseases. Biochimica et biophysica acta 53 24751643
2011 Lethal mitochondrial cardiomyopathy in a hypomorphic Med30 mouse mutant is ameliorated by ketogenic diet. Proceedings of the National Academy of Sciences of the United States of America 53 22106289
1992 Secretion of the Streptomyces tyrosinase is mediated through its trans-activator protein, MelC1. The Journal of biological chemistry 44 1400329
2018 Genome-Wide Association Study in Vestibular Neuritis: Involvement of the Host Factor for HSV-1 Replication. Frontiers in neurology 41 30079052
2019 Increasing evidence of pathogenic role of the Mediator (MED) complex in the development of cardiovascular diseases. Biochimie 39 31255603
2012 Mediator subunits MED1 and MED24 cooperatively contribute to pubertal mammary gland development and growth of breast carcinoma cells. Molecular and cellular biology 38 22331469
2019 Cohesin occupancy and composition at enhancers and promoters are linked to DNA replication origin proximity in Drosophila. Genome research 32 30796039
2019 Viral integration drives multifocal HCC during the occult HBV infection. Journal of experimental & clinical cancer research : CR 32 31200735
2014 Characterization of the influence of mediator complex in HIV-1 transcription. The Journal of biological chemistry 28 25100719
2017 Detection of susceptibility loci on APOA5 and COLEC12 associated with metabolic syndrome using a genome-wide association study in a Taiwanese population. Oncotarget 24 29212154
2022 Gene signature predicting recurrence in oral squamous cell carcinoma is characterized by increased oxidative phosphorylation. Molecular oncology 14 36271693
2021 Mediator complex proximal Tail subunit MED30 is critical for Mediator core stability and cardiomyocyte transcriptional network. PLoS genetics 13 34506481
2017 Genome-wide admixture and association study of subclinical atherosclerosis in the Women's Interagency HIV Study (WIHS). PloS one 13 29206233
2012 Distinct alternative splicing patterns of mediator subunit genes during endothelial progenitor cell differentiation. Biochimie 12 22531626
2024 The essential role of MED27 in stabilizing the mediator complex for cardiac development and function. Life sciences 8 39209248
2022 Immune complexome analysis of a rich variety of serum immune complexes identifies disease-characteristic immune complex antigens in systemic sclerosis. Journal of autoimmunity 8 36436353
2015 MED30 Regulates the Proliferation and Motility of Gastric Cancer Cells. PloS one 8 26110885
2015 Prenatal diagnosis and array comparative genomic hybridization characterization of interstitial deletions of 8q23.3-q24.11 and 8q24.13 associated with Langer-Giedion syndrome, Cornelia de Lange syndrome and haploinsufficiency of TRPS1, RAD21 and EXT1. Taiwanese journal of obstetrics & gynecology 7 26522117
2022 HBV genome-enriched single cell sequencing revealed heterogeneity in HBV-driven hepatocellular carcinoma (HCC). BMC medical genomics 6 35710421
2024 Multiple genetic variants at the SLC30A8 locus affect local super-enhancer activity and influence pancreatic β-cell survival and function. FASEB journal : official publication of the Federation of American Societies for Experimental Biology 5 38661000
2020 HIF1α and p53 Regulated MED30, a Mediator Complex Subunit, is Involved in Regulation of Glioblastoma Pathogenesis and Temozolomide Resistance. Cellular and molecular neurobiology 5 32705436
2017 The Contrasting Role of the Mediator Subunit MED30 in the Progression of Bladder Cancer. Anticancer research 4 29187445
2017 The knockdown of the mediator complex subunit MED30 suppresses the proliferation and migration of renal cell carcinoma cells. Annals of diagnostic pathology 4 29661722
2025 DNA hypermethylation of MED1 and MED23 as early diagnostic biomarkers for unsolved issues in atrial fibrillation. International journal of cardiology 3 40113094
2014 Dissection of open chromatin domain formation by site-specific recombination in Drosophila. Journal of cell science 2 24639466
2023 Multiple genetic variants at the SLC30A8 locus affect local super-enhancer activity and influence pancreatic β-cell survival and function. bioRxiv : the preprint server for biology 1 37502937
2026 Endogenous protein tagging coupled with a CRISPR screening approach identifies UBE3C as a potential MYC oncogene regulator. Scientific reports 0 41965876
2024 Gene Amplification of Mediator Subunit 30 Redirects the MYC Transcriptional Program and Oncogenesis. Research square 0 38766212
2019 Proteomic Interactome of C. elegans Mediator Complex Subunit 28 (MDT-28) Reveals Predominant Association with a Restricted Set of Core Mediator Subunits and an Affinity to Additional Structural and Enzymatic Proteins. Folia biologica 0 32362303

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