Affinage

MED17

Mediator of RNA polymerase II transcription subunit 17 · UniProt Q9NVC6

Length
651 aa
Mass
72.9 kDa
Annotated
2026-06-10
13 papers in source corpus 9 papers cited in narrative 9 extracted findings
Cross-family judge vs UniProt: Affinage preferred faithfulness: 7/7 claims corpus-supported (100%)

Mechanistic narrative

Synthesis pass · prose summary of the discoveries below

MED17 (Srb4/TRAP80) is a head-module subunit of the Mediator complex that is essential for RNA Polymerase II transcription, structurally bridging the head and middle domains and serving as a hub for preinitiation complex assembly (PMID:9710620, PMID:16962561). The temperature-sensitive srb4-138 allele dissociates Mediator at the head/middle boundary and causes loss of the head domain from active promoters, producing a global shutdown of Pol II transcription that establishes MED17 as architecturally indispensable to the complex (PMID:16962561). Human MED17 directly contacts Pol II and the general transcription factors TFIIB, TBP, TFIIE, and TFIIH and supports transcriptional activation, and it also engages histone H4 tails within Mediator (PMID:22693636, PMID:25482373). Beyond core transcription, MED17 connects to nucleotide excision repair: it binds the TFIIH helicase subunit XPB and the endonuclease XPG, and after UV-C irradiation colocalizes with these NER factors and associates with p53 (PMID:25482373). MED17 is a selective coactivator whose target specificity is tuned by signal-dependent phosphorylation: CK2 phosphorylates Ser53 in response to insulin to drive lipogenic gene transcription through a direct interaction with USF1 at the FASN promoter, p38 MAPK phosphorylation at Thr570 gates this CK2 event, and MARK2 phosphorylates Ser152 to selectively enhance NF-κB (RelA) target transcription (PMID:28223413, PMID:33596087). In the liver, MED17 selectively promotes LXR-dependent transcription of SREBP-1c but not ABCA1, controlling Pol II recruitment to specific LXREs and modulating steatosis and triglyceride metabolism in vivo (PMID:25437875). Missense mutation of MED17 (p.L371P) inactivates the protein in a yeast complementation test (PMID:20950787).

Mechanistic history

Synthesis pass · year-by-year structured walk · 9 steps
  1. 1998 High

    Established that Med17/Srb4 functions cooperatively with another Mediator subunit (Med6) as part of a defined subcomplex required for Pol II activation, placing it within the Mediator architecture rather than as an isolated factor.

    Evidence Allele-specific genetic suppressor screen plus biochemical Mediator subcomplex co-purification in yeast

    PMID:9710620

    Open questions at the time
    • Did not resolve the structural basis of the Med6-Srb4 interaction
    • Did not define which activators depend on this interaction
  2. 2006 High

    Resolved why MED17 is essential by showing it holds the head and middle modules together, with loss of the head domain from promoters explaining the global cessation of Pol II transcription.

    Evidence Biochemical purification of Mediator from srb4-138 mutant yeast plus ChIP at permissive and non-permissive temperatures

    PMID:16962561

    Open questions at the time
    • Did not provide atomic-resolution structure of the head/middle interface
    • Mechanism of head retention at active promoters not detailed
  3. 2010 Medium

    Linked human MED17 dysfunction to disease by demonstrating that a patient missense mutation abolishes the conserved protein function.

    Evidence Yeast complementation assay with the homologous SRB4 mutation

    PMID:20950787

    Open questions at the time
    • Functional consequence tested only by surrogate yeast complementation, not in human cells
    • No mechanistic dissection of how the mutation alters Mediator function
  4. 2012 Medium

    Identified a direct contact between MED17 and histone H4 tails, suggesting how Mediator may read chromatin in the vicinity of promoters.

    Evidence UV photo-crosslinking with crosslinker-substituted histone tail peptides and yeast-purified Mediator

    PMID:22693636

    Open questions at the time
    • In vitro crosslinking only; functional consequence of the H4 contact untested
    • No reciprocal or in-cell validation
  5. 2014 Medium

    Mapped human MED17's direct partners (Pol II, TFIIB, TBP, TFIIE, TFIIH) and revealed an unexpected role linking Mediator to nucleotide excision repair via XPB/XPG and p53 after UV damage.

    Evidence Pulldown and in vitro binding assays, luciferase reporters in knockdown cells, and immunofluorescence colocalization after UV-C irradiation

    PMID:25482373

    Open questions at the time
    • NER role inferred from colocalization, not from direct repair assays
    • Single lab without reciprocal validation of all interactions
  6. 2014 High

    Demonstrated promoter-selective coactivation, showing MED17 distinguishes between LXR targets (SREBP-1c vs ABCA1) and thereby separates lipogenesis from reverse cholesterol transport in vivo.

    Evidence shRNA and adenoviral liver-specific knockdown, ChIP for Pol II at LXREs, and in vivo metabolic phenotyping in mice

    PMID:25437875

    Open questions at the time
    • Molecular basis for promoter discrimination between SREBP-1c and ABCA1 not defined
    • Did not identify the MED17 region mediating LXRE selectivity
  7. 2017 High

    Established signal-dependent control of MED17 by showing CK2 phosphorylation at Ser53 (gated by p38 phosphorylation at Thr570) couples insulin signaling to lipogenic transcription through a direct USF1 interaction.

    Evidence In vitro CK2 kinase assay with S53A mutagenesis, Co-IP of MED17-USF1, and knockdown/overexpression in hepatocytes and mouse liver

    PMID:28223413

    Open questions at the time
    • Structural effect of Ser53 phosphorylation on Mediator not resolved
    • Cross-talk logic between p38 and CK2 events only partially defined
  8. 2021 High

    Extended the phospho-regulation model by showing MARK2 phosphorylation of MED17 at Ser152 selectively tunes NF-κB target transcription, establishing MED17 as a node integrating polarity-kinase signaling with inflammatory gene programs.

    Evidence In vitro phosphorylation with recombinant MARK2, phosphomimetic/null mutagenesis, Co-IP with RelA, and transcriptome analysis

    PMID:33596087

    Open questions at the time
    • Mechanism by which Ser152 phosphorylation selects specific NF-κB transcripts not defined
    • Physiological context of MARK2-MED17 signaling untested in vivo
  9. 2021 Low

    Connected MED17 deficiency to a cellular stress phenotype by showing patient-mutant fibroblasts exhibit elevated unfolded protein responses.

    Evidence RT-qPCR for CHOP/ATF4 and immunoblot for p-eIF2α in patient-derived fibroblasts

    PMID:34392449

    Open questions at the time
    • No mechanistic link established between MED17 mutation and UPR activation
    • Single lab, descriptive biochemistry without rescue

Open questions

Synthesis pass · forward-looking unresolved questions
  • How MED17's multiple phosphorylation events and partner contacts are integrated to achieve gene-selective coactivation, and the structural basis for its promoter discrimination, remain unresolved.
  • No structural model linking phospho-sites to Mediator conformation
  • Mechanism of promoter/target selectivity uncharacterized
  • Causal chain from human mutations to cellular phenotypes incomplete

Mechanism profile

Synthesis pass · controlled-vocabulary classification · explore literature graph →
Molecular activity
GO:0140110 transcription regulator activity 4 GO:0060090 molecular adaptor activity 2 GO:0042393 histone binding 1
Localization
GO:0005634 nucleus 1
Pathway
R-HSA-74160 Gene expression (Transcription) 3 R-HSA-1430728 Metabolism 2 R-HSA-162582 Signal Transduction 2 R-HSA-73894 DNA Repair 1
Complex memberships
Mediator complex

Evidence

Reading pass · 9 per-paper findings extracted from the source corpus
Year Finding Method Journal Conf PMIDs
1998 A functional interaction between Med6 and Srb4 (Med17) is required for transcriptional activation by RNA Pol II. A dominant, allele-specific suppressor screen identified an SRB4 allele that suppresses med6-ts transcriptional defects, and biochemical fractionation showed Med6 and Srb4 co-purify in the same Mediator subcomplex. Genetic suppressor screen (allele-specific suppression), biochemical Mediator subcomplex fractionation Molecular and cellular biology High 9710620
2006 The srb4-138 (Med17) temperature-sensitive allele causes dissociation of the Mediator complex at the head/middle domain boundary. Both head and middle sub-complexes can independently associate with RNA polymerase II, but at non-permissive temperature the head domain (containing Med17) is lost from active promoters, explaining the global cessation of RNA Pol II transcription. Biochemical purification of Mediator from mutant yeast strains, chromatin immunoprecipitation (ChIP) at permissive and non-permissive temperatures Biochemical and biophysical research communications High 16962561
2010 The p.L371P missense mutation in human MED17 (corresponding to SRB4 in S. cerevisiae) inactivates the protein function, as demonstrated by complementation failure in yeast carrying the homologous mutation. Yeast complementation assay with the corresponding S. cerevisiae SRB4 mutation American journal of human genetics Medium 20950787
2012 Med17 (Srb4) is a direct target of histone H4 tail interactions within the Mediator complex, as identified by UV photo-crosslinking with histone tail peptides containing a UV-activatable amino acid analog crosslinker. UV photo-crosslinking with synthetic histone tail peptides substituted with a crosslinkable amino acid analog; Mediator purified from mutant yeast strains PloS one Medium 22693636
2014 Human MED17 (hMED17) physically interacts with RNA Pol II and the general transcription factors TFIIB, TBP, TFIIE, and TFIIH via pulldown assays, and supports transcriptional activation in cells. Additionally, hMED17 binds the DNA helicase/TFIIH subunit XPB (required for NER), and also binds XPG in vitro. Upon UV-C irradiation, hMED17 colocalizes with NER factors XPB and XPG in the nucleus and associates with p53, suggesting a role in switching between transcription and nucleotide excision repair. Pulldown assays, luciferase reporter assays in hMED17-knockdown cells, immunofluorescence co-localization after UV-C irradiation, in vitro binding assays Genes to cells : devoted to molecular & cellular mechanisms Medium 25482373
2014 Hepatic TRAP80 (MED17) selectively promotes LXR-dependent transcription of SREBP-1c but not ABCA1. Adenovirus-mediated shTRAP80 knockdown inhibited RNA Pol II recruitment to the LXRE of SREBP-1c but not to the LXRE of ABCA1, and liver-specific TRAP80 knockdown in mice ameliorated LXR-induced liver steatosis and hypertriglyceridemia while preserving reverse cholesterol transport. shRNA knockdown in human hepatic cell lines, adenovirus-mediated liver-specific knockdown in mice, ChIP for RNA Pol II at LXREs, in vivo metabolic phenotyping The Journal of clinical investigation High 25437875
2017 MED17 is phosphorylated at Ser53 by casein kinase 2 (CK2) in response to insulin/feeding conditions in hepatocytes and mouse liver, and this phosphorylation is required for insulin-stimulated transcriptional activation of lipogenic genes (e.g., FASN). MED17 directly interacts with the transcription factor USF1 at the FASN promoter to recruit Mediator and Pol II. Additionally, p38 MAPK phosphorylates MED17 at Thr570, and CK2-mediated phosphorylation at Ser53 only occurs in the absence of this p38-mediated event. Co-immunoprecipitation (MED17-USF1 interaction), phosphorylation mapping by site-directed mutagenesis (S53A non-phosphorylatable mutant), in vitro CK2 kinase assay, knockdown/overexpression in hepatocytes and adenovirus-mediated mouse liver studies, triglyceride/fatty acid synthesis assays Science signaling High 28223413
2021 The cell polarity kinase MARK2 (Par1b) directly phosphorylates MED17 at Ser152 in vitro, and phosphomimetic S152D-MED17 selectively enhances NF-κB transcriptional activity for a subset of transcripts, mimicking the effect of MARK2 activation, while S152A-MED17 antagonizes this effect. MED17 was identified as the ~80 kDa band co-immunoprecipitating with RelA (NF-κB) upon MARK2 overexpression. In vitro phosphorylation with recombinant MARK2, co-immunoprecipitation (MED17-RelA), site-directed mutagenesis (S152D/S152A), transcriptome analysis and transcript enrichment in cells expressing phosphomimetic/phosphodeficient MED17 Molecular biology of the cell High 33596087
2021 MED17 mutations cause increased unfolded protein responses (UPR) in patient-derived fibroblasts, characterized by upregulation of CHOP and ATF4 expression and increased basal phosphorylation of eIF2α. Patient fibroblast analysis: RT-qPCR for UPR genes (CHOP, ATF4), immunoblot for p-eIF2α Neurogenetics Low 34392449

Source papers

Stage 0 corpus · 13 papers · ranked by NIH iCite citations
Year Title Journal Citations PMID
1998 Requirement for a functional interaction between mediator components Med6 and Srb4 in RNA polymerase II transcription. Molecular and cellular biology 71 9710620
2010 Infantile cerebral and cerebellar atrophy is associated with a mutation in the MED17 subunit of the transcription preinitiation mediator complex. American journal of human genetics 65 20950787
2014 Hepatic TRAP80 selectively regulates lipogenic activity of liver X receptor. The Journal of clinical investigation 28 25437875
2006 The classical srb4-138 mutant allele causes dissociation of yeast Mediator. Biochemical and biophysical research communications 27 16962561
2012 Med5(Nut1) and Med17(Srb4) are direct targets of mediator histone H4 tail interactions. PloS one 25 22693636
2017 Transcriptional activation of lipogenesis by insulin requires phosphorylation of MED17 by CK2. Science signaling 22 28223413
2014 Human mediator MED17 subunit plays essential roles in gene regulation by associating with the transcription and DNA repair machineries. Genes to cells : devoted to molecular & cellular mechanisms 16 25482373
2015 Distinct but milder phenotypes with choreiform movements in siblings with compound heterozygous mutations in the transcription preinitiation mediator complex subunit 17 (MED17). Brain & development 11 26004231
2021 Increased unfolded protein responses caused by MED17 mutations. Neurogenetics 8 34392449
2021 Delineation of the phenotype of MED17-related disease in Caucasus-Jewish families. European journal of paediatric neurology : EJPN : official journal of the European Paediatric Neurology Society 6 33756211
2022 An expansion of phenotype: novel homozygous variant in the MED17 identified in patients with progressive microcephaly and global developmental delay. Journal of neurogenetics 5 36508181
2025 Cu-tolerant Klebsiella variicola SRB-4 increased the nanoparticle (NP) stress resilience in garden peas (Pisum sativum L.) raised in soil polluted with varying doses of copper oxide (CuO)-NP. World journal of microbiology & biotechnology 4 39794604
2021 The cell polarity kinase Par1b/MARK2 activation selects specific NF-kB transcripts via phosphorylation of core mediator Med17/TRAP80. Molecular biology of the cell 4 33596087

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