Affinage

LTBR

Tumor necrosis factor receptor superfamily member 3 · UniProt P36941

Length
435 aa
Mass
46.7 kDa
Annotated
2026-06-10
10 papers in source corpus 7 papers cited in narrative 7 extracted findings
Cross-family judge vs UniProt: Affinage preferred faithfulness: 3/4 claims corpus-supported (75%)

Mechanistic narrative

Synthesis pass · prose summary of the discoveries below

LTBR is a TNF receptor superfamily member that transduces lymphotoxin/LIGHT signals into NF-κB activation to shape immune cell behavior and the tumor microenvironment (PMID:39164890, PMID:23370464). Upon engagement by its LTα1/β2 ligand, LTBR drives the non-canonical NF-κB axis through NIK and RelB, where NIK inhibition abrogates RelB expression and nuclear co-translocation of RelB and p52, promoting tumor cell proliferation (PMID:39164890). Receptor abundance and signaling output are stabilized by physical association with TRAF5, whose loss downregulates LTBR and suppresses LTBR-driven NF-κB signaling (PMID:37366426), while LTBR transcription is directly activated by CREB1 binding at its promoter (PMID:36118831). Through non-canonical NF-κB together with Wnt/β-catenin signaling, LTBR sustains the immunosuppressive M2 phenotype of tumor-associated macrophages (PMID:39429877), and agonistic activation of the receptor on tumor stroma drives high endothelial venule differentiation and tertiary lymphoid structure formation that enhance T cell adhesion and extravasation (PMID:42012453). In cancer cells, LTBR signaling acts alongside IFN sensing as a necessary determinant of CD8+ TIL-mediated, HLA class I-independent cytotoxicity [PMID:bio_10.1101_2025.11.19.689204].

Mechanistic history

Synthesis pass · year-by-year structured walk · 7 steps
  1. 2013 Low

    Established that LTBR directly binds its ligand TNFSF14 (LIGHT) at the protein level, anchoring it as a functional receptor for this ligand.

    Evidence Recombinant soluble TNFSF14 and extracellular LTBR proteins in a confocal binding assay with rabbit splenic T cells

    PMID:23370464

    Open questions at the time
    • Binding shown only in rabbit ortholog without mutagenesis
    • No downstream signaling or affinity quantification
    • Does not address LTα1/β2 ligand binding
  2. 2022 Medium

    Identified the upstream transcriptional control of LTBR, showing CREB1 directly activates its promoter and that LTBR in turn modulates NF-κB-dependent epithelial viability.

    Evidence Luciferase reporter and ChIP assays with siRNA knockdown in lung epithelial cells

    PMID:36118831

    Open questions at the time
    • NF-κB branch (canonical vs non-canonical) not resolved
    • Single lab
    • Physiological context of CREB1→LTBR axis unclear
  3. 2023 Medium

    Defined TRAF5 as a physical partner that stabilizes LTBR and its NF-κB output, linking receptor levels to a pro-survival, anti-necroptotic program.

    Evidence Reciprocal Co-IP, immunofluorescence, knockdown/overexpression rescue, and xenograft in hepatocellular carcinoma cells

    PMID:37366426

    Open questions at the time
    • Mechanism by which TRAF5 sustains LTBR expression not defined
    • Direct binding interface not mapped
    • Single lab
  4. 2024 Medium

    Resolved the core signaling axis, demonstrating that LTα1/β2-LTBR engages NIK→RelB non-canonical NF-κB to drive proliferation.

    Evidence Cholangiocarcinoma cell lines and patient-derived organoids with NIK inhibition, immunoblot, RNA-seq, and in vivo murine models

    PMID:39164890

    Open questions at the time
    • Relative contribution of canonical NF-κB not quantified
    • Single tumor type focus
    • Single lab
  5. 2024 Medium

    Established LTBR as a cell-intrinsic driver of tumor-associated macrophage immunosuppression and M2 polarization through non-canonical NF-κB and Wnt/β-catenin.

    Evidence Macrophage-specific LTBR knockout mice with tumor growth, immune phenotyping, and TAM knockdown

    PMID:39429877

    Open questions at the time
    • How Wnt/β-catenin is engaged downstream of LTBR unresolved
    • Ligand source in TME not identified
    • Single lab
  6. 2026 Medium

    Showed that agonistic LTBR activation on tumor stroma reprograms the vasculature toward HEV differentiation and TLS formation, enhancing T cell infiltration.

    Evidence FAP-LTBR bispecific agonist in primary endothelial cells, 3D microfluidic models, and multiple murine tumor models with spatial transcriptomics

    PMID:42012453

    Open questions at the time
    • Signaling branch mediating HEV differentiation not dissected
    • Durability of TLS-like aggregates unknown
    • Single lab
  7. 2025 Medium

    Implicated LTBR signaling in cancer cells, with IFN sensing, as a necessary co-determinant of HLA-independent CD8+ TIL cytotoxicity, defining a non-classical killing pathway.

    Evidence Whole-genome CRISPR loss-of-function screen and patient-derived TIL-melanoma co-cultures with paired scRNA-seq/scTCR-seq (preprint)

    PMID:bio_10.1101_2025.11.19.689204

    Open questions at the time
    • Preprint, not peer-reviewed
    • Molecular link between LTBR signaling and lysis sensitivity unresolved
    • Ligand source from TIL (LTA/LTB) interaction with cancer-cell LTBR not formally demonstrated

Open questions

Synthesis pass · forward-looking unresolved questions
  • How LTBR's distinct downstream branches (non-canonical NF-κB, Wnt/β-catenin) are selectively engaged in different cell types and ligand contexts remains unresolved.
  • No structural model of ligand-receptor-TRAF assembly in the corpus
  • Branch selection determinants unknown
  • Integration of IFN and LTBR signals mechanistically undefined

Mechanism profile

Synthesis pass · controlled-vocabulary classification · explore literature graph →
Molecular activity
GO:0060089 molecular transducer activity 2 GO:0048018 receptor ligand activity 1
Localization
GO:0005886 plasma membrane 1
Pathway
R-HSA-168256 Immune System 3 R-HSA-162582 Signal Transduction 2

Evidence

Reading pass · 7 per-paper findings extracted from the source corpus
Year Finding Method Journal Conf PMIDs
2022 CREB1 directly binds the LTBR promoter and transcriptionally activates LTBR expression, as confirmed by luciferase reporter assay and ChIP assay. LTBR in turn regulates the NF-κB pathway to modulate lung epithelial cell viability and apoptosis. Luciferase reporter assay, ChIP assay, siRNA knockdown, cell viability (CCK-8), flow cytometry apoptosis analysis Computational and mathematical methods in medicine Medium 36118831
2024 LTBR maintains the immunosuppressive activity and M2 phenotype of tumor-associated macrophages via noncanonical NF-κB and Wnt/β-catenin signaling pathways; macrophage-specific knockout of LTBR blocks TAM immunosuppressive activity and M2 polarization. Macrophage-specific LTBR knockout mouse model, tumor growth assays, immune phenotyping (CD8+ T cells, myeloid-derived suppressor cells), siRNA-mediated knockdown in TAMs iMeta Medium 39429877
2024 LTα1/β2 ligand activates the LTBR/NIK/RelB (non-canonical NF-κB) signaling axis, promoting proliferation in cholangiocarcinoma cell lines and patient-derived organoids; NIK inhibition suppresses RelB expression and nuclear co-translocation of RelB and p52. CCA cell lines and patient-derived organoids, real-time impedance measurement, flow cytometry, immunoblot, qRT-PCR, RNA sequencing, in vivo murine CCA models Liver international Medium 39164890
2023 TRAF5 physically interacts with LTBR (confirmed by co-immunoprecipitation and immunofluorescence); TRAF5 silencing downregulates LTBR expression and suppresses LTBR-mediated NF-κB signaling, enhancing necroptosis in hepatocellular carcinoma cells. LTBR overexpression rescues proliferation, migration, and invasion and abolishes the pro-necroptotic effect of TRAF5 knockdown. Co-immunoprecipitation, immunofluorescence, siRNA knockdown and overexpression, CCK-8, colony formation, Transwell, flow cytometry, Hoechst/PI staining, xenograft tumor model, western blotting PeerJ Medium 37366426
2026 Targeted agonistic activation of LTβR signaling on FAP-expressing tumor stroma drives high endothelial venule (HEV) differentiation, induces chemokine secretion from endothelial cells, enhances T cell adhesion and extravasation, and promotes formation of TLS-like immune aggregates in the tumor microenvironment. FAP-LTBR bispecific agonist in vitro (primary human endothelial cells, 3D microfluidic vascular models) and in vivo (multiple murine tumor models), spatial transcriptomics, 3D immunophenotyping Clinical cancer research Medium 42012453
2025 LTβR signaling in cancer cells, together with IFN sensing, is necessary and sufficient for CD8+ TIL-mediated, class I HLA-independent cancer cell lysis, as identified by whole-genome loss-of-function CRISPR screen and confirmed by validation studies; expanded CD8+ TIL express high LTB and upregulate LTA upon co-culture with cancer cells. Whole-genome CRISPR loss-of-function screen, patient-derived TIL-melanoma co-cultures, paired scRNA-seq and scTCR-seq, functional validation assays bioRxivpreprint Medium bio_10.1101_2025.11.19.689204
2013 Recombinant rabbit (Oryctolagus cuniculus) soluble TNFSF14 and extracellular LTBR proteins were produced and shown to bind splenic T cells in vitro, confirming direct protein-protein binding between TNFSF14 (LIGHT) and LTBR. Recombinant protein expression, Ni-NTA affinity purification, confocal laser microscopy binding assay with splenic T cells Molecular immunology Low 23370464

Source papers

Stage 0 corpus · 10 papers · ranked by NIH iCite citations
Year Title Journal Citations PMID
2005 Muscle atrophy and bone loss after 90 days' bed rest and the effects of flywheel resistive exercise and pamidronate: results from the LTBR study. Bone 220 15811637
2007 The IclR-type transcriptional repressor LtbR regulates the expression of leucine and tryptophan biosynthesis genes in the amino acid producer Corynebacterium glutamicum. Journal of bacteriology 42 17259312
2024 LTBR acts as a novel immune checkpoint of tumor-associated macrophages for cancer immunotherapy. iMeta 16 39429877
2022 CREB1 Transcriptionally Activates LTBR to Promote the NF-κB Pathway and Apoptosis in Lung Epithelial Cells. Computational and mathematical methods in medicine 10 36118831
2024 Lymphotoxin beta-activated LTBR/NIK/RELB axis drives proliferation in cholangiocarcinoma. Liver international : official journal of the International Association for the Study of the Liver 8 39164890
2017 Association of LTBR polymorphisms with chronic hepatitis B virus infection and hepatitis B virus-related hepatocellular carcinoma. International immunopharmacology 8 28575727
2023 Silencing of TRAF5 enhances necroptosis in hepatocellular carcinoma by inhibiting LTBR-mediated NF-κB signaling. PeerJ 6 37366426
2024 Comprehensive analysis reveals that LTBR is a immune-related biomarker for glioma. Computers in biology and medicine 4 38599071
2013 Molecular characterization, expression and binding activity of the cytokines TNFSF14 and its receptor LTBR in Oryctolagus cuniculus (rabbit). Molecular immunology 3 23370464
2026 FAP-Targeted LTBR Agonist Drives HEV Differentiation and Immune Niche Formation for Improved Immunotherapy Response in Solid Tumours. Clinical cancer research : an official journal of the American Association for Cancer Research 0 42012453

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