Affinage

LRRC45

Leucine-rich repeat-containing protein 45 · UniProt Q96CN5

Length
670 aa
Mass
76.0 kDa
Annotated
2026-06-10
12 papers in source corpus 8 papers cited in narrative 10 extracted findings
Cross-family judge vs UniProt: Affinage preferred faithfulness: 6/6 claims corpus-supported (100%)

Mechanistic narrative

Synthesis pass · prose summary of the discoveries below

LRRC45 is a centriolar protein that functions in centrosome architecture and ciliogenesis (PMID:30131441, PMID:39882846). At the distal appendages of the mother centriole it is recruited by the core appendage proteins Cep83 and SCLT1 and in turn recruits the keratin-binding protein FBF1, placing it within the hierarchical distal-appendage assembly network (PMID:30131441, PMID:39882846). Functionally, LRRC45 promotes early ciliogenesis in CP110-uncapped centrioles by organizing centriolar satellites, establishing the transition zone, and promoting docking of Rab8-positive vesicles, while being dispensable for CP110 removal and for docking of early ciliary vesicles (PMID:30131441). It also acts as a centrosome linker component, interacting with CCDC102B downstream of C-Nap1/CEP250 to support rootletin filament formation and centrosome cohesion (PMID:30404835), and localizes to the basal body of both primary and motile cilia across differentiated and stem cell types (PMID:30131441). Biallelic loss-of-function variants in LRRC45 impair ciliogenesis, with patient fibroblasts showing reduced LRRC45 mRNA/protein and reduced cilia frequency and length, establishing a ciliopathy-associated role (PMID:39638757). Independently of its centriolar function, LRRC45 competitively binds KEAP1 to inhibit ubiquitin-proteasome degradation of NRF2, enhancing NRF2 nuclear translocation and anti-ferroptotic activity in bladder cancer (PMID:39522565), and drives proliferation and metastasis through c-MYC/Slug and MMP2/MMP9 in lung adenocarcinoma (PMID:39326735).

Mechanistic history

Synthesis pass · year-by-year structured walk · 9 steps
  1. 2018 High

    Established where LRRC45 sits in the distal-appendage recruitment hierarchy, answering how it is targeted to the mother centriole and what it recruits in turn.

    Evidence Localization and epistasis/recruitment-hierarchy experiments in cultured cells

    PMID:30131441

    Open questions at the time
    • Molecular nature of the Cep83-SCLT1 binding interface not defined
    • Direct versus indirect recruitment of FBF1 not resolved
  2. 2018 High

    Defined which specific ciliogenesis steps require LRRC45, distinguishing its role in transition zone and satellite organization and Rab8 vesicle docking from steps it does not control.

    Evidence siRNA knockdown with functional readouts for transition zone assembly, centriolar satellite organization, Rab8 vesicle docking, and CP110 removal

    PMID:30131441

    Open questions at the time
    • Mechanism by which LRRC45 organizes satellites unknown
    • Direct effectors linking LRRC45 to Rab8 vesicle docking not identified
  3. 2018 Medium

    Showed LRRC45 broadly localizes to the basal body across primary and motile cilia and multiple cell types, indicating a general rather than cell-type-restricted ciliary function.

    Evidence Immunofluorescence across differentiated and stem cells

    PMID:30131441

    Open questions at the time
    • Functional contribution in motile cilia not tested
    • Quantitative localization dynamics across the cell cycle not addressed
  4. 2018 Medium

    Connected LRRC45 to the centrosome cohesion machinery, showing it interacts with CCDC102B within the C-Nap1/rootletin linker, expanding its role beyond ciliogenesis.

    Evidence Co-immunoprecipitation, localization, and siRNA knockdown with centrosome cohesion phenotype

    PMID:30404835

    Open questions at the time
    • Direct binding between LRRC45 and CCDC102B not biochemically reconstituted
    • Whether LRRC45 is required for rootletin filament formation independent of CCDC102B unclear
  5. 2020 Medium

    Defined pathway independence between LRRC45 and Cep44, ruling out mutual dependence in centrosomal recruitment and clarifying the modularity of the appendage network.

    Evidence siRNA knockdown with immunofluorescence readout of centrosomal protein levels

    PMID:31974111

    Open questions at the time
    • Functional interplay during ciliogenesis not tested
    • Single-method negative finding
  6. 2023 Medium

    Systematic CRISPR knockout mapping (preprint) positioned LRRC45 within the multi-step distal-appendage assembly network and its dependence on upstream components.

    Evidence CRISPR-Cas9 knockouts, localization, and functional cilia-formation assays (preprint)

    PMID:36711481

    Open questions at the time
    • Superseded by peer-reviewed version
    • Precise step-by-step requirements still being resolved at this stage
  7. 2024 Medium

    Provided human genetic evidence that LRRC45 loss-of-function impairs ciliogenesis, linking the gene to disease through reduced cilia frequency and length in patient cells.

    Evidence Exome sequencing, RT-PCR splicing analysis, Western blot, and immunofluorescence in patient-derived fibroblasts

    PMID:39638757

    Open questions at the time
    • Full clinical phenotype spectrum not delineated in this corpus
    • Rescue of the cilia defect not demonstrated
  8. 2024 Medium

    Identified a non-centriolar function: LRRC45 competitively binds KEAP1 to stabilize NRF2, defining a mechanism for its anti-ferroptotic, pro-tumorigenic activity.

    Evidence Co-IP, siRNA knockdown, NRF2 stability/degradation assay, nuclear fractionation, and ferroptosis assay in bladder cancer cells

    PMID:39522565

    Open questions at the time
    • KEAP1 binding interface and competitive site not mapped
    • Relationship between centriolar and KEAP1-NRF2 functions unknown
  9. 2024 Medium

    Placed c-MYC/Slug and MMP2/MMP9 downstream of LRRC45 in driving proliferation and metastasis in lung adenocarcinoma via rescue epistasis.

    Evidence siRNA knockdown, western blot, colony formation, migration assay, rescue overexpression, and xenograft mouse model

    PMID:39326735

    Open questions at the time
    • Direct molecular link between LRRC45 and c-MYC/Slug induction not defined
    • Whether this acts through the KEAP1-NRF2 axis untested

Open questions

Synthesis pass · forward-looking unresolved questions
  • How LRRC45's centriolar/ciliary scaffolding role mechanistically relates to its KEAP1-NRF2 and oncogenic signaling functions remains unresolved.
  • No unifying mechanism connecting centrosomal and cancer-signaling roles
  • No structural model of LRRC45 interactions
  • Substrate or enzymatic activity, if any, undefined

Mechanism profile

Synthesis pass · controlled-vocabulary classification · explore literature graph →
Molecular activity
GO:0005198 structural molecule activity 3 GO:0060090 molecular adaptor activity 2
Localization
GO:0005815 microtubule organizing center 4 GO:0005634 nucleus 1 GO:0005929 cilium 1
Pathway
R-HSA-1643685 Disease 3 R-HSA-1852241 Organelle biogenesis and maintenance 3
Complex memberships
centrosome linkermother centriole distal appendages

Evidence

Reading pass · 10 per-paper findings extracted from the source corpus
Year Finding Method Journal Conf PMIDs
2018 LRRC45 is recruited to the mother centriole distal appendages by the core appendage proteins Cep83 and SCLT1, and in turn recruits the keratin-binding protein FBF1. Localization studies and epistasis analysis in cultured cells (loss-of-function/recruitment hierarchy experiments) Journal of cell science High 30131441
2018 LRRC45 promotes early ciliogenesis in CP110-uncapped centrioles by organising centriolar satellites, establishing the transition zone, and promoting docking of Rab8 GTPase-positive vesicles; it is not required for docking of early ciliary vesicles or for removal of CP110 (negative finding for those two steps). siRNA knockdown with functional readouts: transition zone assembly, centriolar satellite organisation, Rab8 vesicle docking, CP110 removal assays Journal of cell science High 30131441
2018 LRRC45 localizes to the basal body of primary and motile cilia in both differentiated and stem cells, indicating a broad role in ciliogenesis. Immunofluorescence localization in multiple cell types including stem cells Journal of cell science Medium 30131441
2018 CCDC102B interacts with the centrosome linker component LRRC45 and is required for centrosome cohesion; CCDC102B is recruited by C-Nap1 (CEP250) and facilitates rootletin filament formation. Co-immunoprecipitation, localization studies, siRNA knockdown with centrosome cohesion phenotype Journal of cell science Medium 30404835
2020 Cep44 does not impinge on the stability or centrosomal recruitment of LRRC45, and LRRC45 does not impinge on Cep44 — these proteins are independently recruited to the centrosome (negative finding establishing pathway independence). siRNA knockdown with immunofluorescence readout of centrosomal protein levels Journal of cell science Medium 31974111
2025 Comprehensive CRISPR-Cas9 knockout analysis places LRRC45 within the distal appendage hierarchy; its precise position and requirement for each cilia-formation step (vesicle recruitment, IFT initiation, CP110 removal) was mapped relative to other distal appendage proteins including CEP83, SCLT1, CEP164, TTBK2, FBF1, CEP89. CRISPR-Cas9 knockout panel, localization, and functional assays for four ciliary steps eLife High 39882846
2023 CRISPR-Cas9 knockout analysis (preprint version) confirms LRRC45 as a distal appendage protein in a complex hierarchical assembly network; its localization depends on upstream components and it participates in multiple steps of cilia formation. CRISPR-Cas9 knockouts, localization, functional cilia-formation assays bioRxivpreprint Medium 36711481
2024 Biallelic loss-of-function variants in LRRC45 impair ciliogenesis: patient fibroblasts with a splicing variant causing exon 14 skipping show drastically reduced LRRC45 mRNA and protein and a significant reduction in primary cilia frequency and length. Exome sequencing, RT-PCR splicing analysis, Western blot, immunofluorescence cilia frequency/length measurement in patient-derived fibroblasts Clinical genetics Medium 39638757
2024 LRRC45 competitively interacts with KEAP1, inhibiting ubiquitin-proteasome-mediated degradation of NRF2, thereby enhancing nuclear translocation of NRF2 and its anti-ferroptotic activity in bladder cancer cells. Co-immunoprecipitation, siRNA knockdown, NRF2 protein stability/degradation assay, nuclear fractionation, ferroptosis assay Free radical biology & medicine Medium 39522565
2024 LRRC45 knockdown in lung adenocarcinoma cells reduces c-MYC, Slug, MMP2, and MMP9 expression; overexpression of c-MYC/Slug or MMP2/MMP9 in LRRC45-deficient cells partially or fully rescues proliferation and metastasis defects, placing these downstream of LRRC45. siRNA knockdown, western blot, colony formation, migration assay, rescue overexpression, xenograft mouse model Advances in medical sciences Medium 39326735

Source papers

Stage 0 corpus · 12 papers · ranked by NIH iCite citations
Year Title Journal Citations PMID
2018 LRRC45 contributes to early steps of axoneme extension. Journal of cell science 42 30131441
2025 A hierarchical pathway for assembly of the distal appendages that organize primary cilia. eLife 25 39882846
2018 CCDC102B functions in centrosome linker assembly and centrosome cohesion. Journal of cell science 21 30404835
2019 Association between long-term air pollution exposure and DNA methylation: The REGICOR study. Environmental research 20 31260916
2021 Molecular diagnoses in the congenital malformations caused by ciliopathies cohort of the 100,000 Genomes Project. Journal of medical genetics 18 34716235
2020 Cep44 functions in centrosome cohesion by stabilizing rootletin. Journal of cell science 14 31974111
2023 A hierarchical pathway for assembly of the distal appendages that organize primary cilia. bioRxiv : the preprint server for biology 12 36711481
2020 Genome-Wide Association Study for the Identification of Novel Genetic Variants Associated with the Risk of Neuroblastoma in Korean Children. Cancer research and treatment 11 32599975
2024 LRRC45 accelerates bladder cancer development and ferroptosis inhibition via stabilizing NRF2 by competitively KEAP1 interaction. Free radical biology & medicine 6 39522565
2024 LRRC45 promotes lung cancer proliferation and progression by enhancing c-MYC, slug, MMP2, and MMP9 expression. Advances in medical sciences 5 39326735
2025 Astrocyte Transcriptomics in a Three-Dimensional Tissue-Engineered Rostral Migratory Stream. Cells 2 41227295
2024 Biallelic Variants in LRRC45 Impair Ciliogenesis and Cause a Severe Neurological Disorder. Clinical genetics 1 39638757

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