Affinage

CCDC102B

Coiled-coil domain-containing protein 102B · UniProt Q68D86

Length
513 aa
Mass
60.4 kDa
Annotated
2026-06-09
22 papers in source corpus 2 papers cited in narrative 2 extracted findings
Cross-family judge vs UniProt: Affinage preferred faithfulness: 3/3 claims corpus-supported (100%)

Mechanistic narrative

Synthesis pass · prose summary of the discoveries below

CCDC102B is a centrosome linker protein required for centrosome cohesion during interphase (PMID:30404835). It is recruited to the centrosome by C-Nap1 (CEP250) and interacts with the centrosome linker components rootletin and LRRC45, decorating and facilitating the formation of rootletin filaments; Nek2A-mediated phosphorylation drives its dissociation from the centrosome at the onset of mitosis (PMID:30404835). Independently, CCDC102B promotes breast cancer metastasis by activating the NF-κB pathway: it physically interacts with RACK1 and reduces the RACK1–IKKα association to potentiate NF-κB activation, while RACK1 in turn targets CCDC102B for lysosomal degradation through chaperone-mediated autophagy (PMID:35957886).

Mechanistic history

Synthesis pass · year-by-year structured walk · 2 steps
  1. 2018 High

    Established CCDC102B as a bona fide centrosome linker protein and placed it within the C-Nap1/rootletin cohesion machinery and the Nek2A mitotic disengagement switch, defining its interphase cellular role.

    Evidence Co-IP, immunofluorescence localization, in vitro interaction and phosphorylation assays, and loss-of-function with a centrosome cohesion phenotype readout in cultured cells

    PMID:30404835

    Open questions at the time
    • Structural basis of CCDC102B binding to rootletin/LRRC45 not resolved
    • Specific Nek2A phosphosite(s) and their direct role in displacement not mapped
    • Whether CCDC102B is required for rootletin filament nucleation versus stabilization not distinguished
  2. 2022 Medium

    Connected CCDC102B to cancer cell behavior by showing it activates NF-κB through RACK1/IKKα modulation and is reciprocally controlled by RACK1-driven chaperone-mediated autophagy, linking its protein stability to a metastatic signaling output.

    Evidence Reciprocal Co-IP with mass spectrometry, CRISPR/Cas9 in vivo screening, RNA-seq, migration/invasion assays, and tail-vein and xenograft mouse models

    PMID:35957886

    Open questions at the time
    • Single-lab study; reciprocal validation of the NF-κB axis in independent models pending
    • Mechanistic link, if any, between the centrosome cohesion role and NF-κB/metastasis function unknown
    • CMA targeting motif on CCDC102B not defined

Open questions

Synthesis pass · forward-looking unresolved questions
  • Whether CCDC102B's centrosome-linker function and its RACK1/NF-κB metastatic function are mechanistically coupled remains unresolved.
  • No experiment tests whether centrosome localization influences NF-κB signaling
  • No structural or domain-level dissection separating the two activities

Mechanism profile

Synthesis pass · controlled-vocabulary classification · explore literature graph →
Molecular activity
GO:0060090 molecular adaptor activity 1
Localization
GO:0005815 microtubule organizing center 1
Pathway
R-HSA-1640170 Cell Cycle 1
Complex memberships
centrosome linker

Evidence

Reading pass · 2 per-paper findings extracted from the source corpus
Year Finding Method Journal Conf PMIDs
2018 CCDC102B is a centrosome linker protein required for centrosome cohesion. It is recruited to the centrosome by C-Nap1 (CEP250), interacts with centrosome linker components rootletin and LRRC45, decorates and facilitates the formation of rootletin filaments, and is phosphorylated by Nek2A leading to its disassociation from the centrosome at the onset of mitosis. Co-immunoprecipitation, immunofluorescence localization, in vitro interaction assays, phosphorylation assays, loss-of-function with centrosome cohesion phenotype readout Journal of cell science High 30404835
2022 CCDC102B promotes breast cancer metastasis via activation of the NF-κB pathway. RACK1 promotes CCDC102B lysosomal degradation through chaperone-mediated autophagy (CMA). Loss of RACK1 stabilizes CCDC102B, and overexpressed CCDC102B reduces interaction between RACK1 and IKKα, thereby positively regulating NF-κB pathway activation. CCDC102B and RACK1 interact physically as shown by co-immunoprecipitation and mass spectrometry. Co-immunoprecipitation, mass spectrometry, CRISPR/Cas9 in vivo screening, RNA sequencing, nuclear protein extraction, immunofluorescence, tail vein metastasis model, subcutaneous xenograft model, wound healing/migration/invasion assays Frontiers in oncology Medium 35957886

Source papers

Stage 0 corpus · 22 papers · ranked by NIH iCite citations
Year Title Journal Citations PMID
2016 Development of a methylation marker set for forensic age estimation using analysis of public methylation data and the Agena Bioscience EpiTYPER system. Forensic science international. Genetics 112 27337627
2016 Identification and evaluation of age-correlated DNA methylation markers for forensic use. Forensic science international. Genetics 103 27017110
2022 A common epigenetic clock from childhood to old age. Forensic science international. Genetics 42 35777225
2020 The evaluation of seven age-related CpGs for forensic purpose in blood from Chinese Han population. Forensic science international. Genetics 37 32006895
2018 Estimation of chimpanzee age based on DNA methylation. Scientific reports 31 29968770
2010 A maternally inherited chromosome 18q22.1 deletion in a male with late-presenting diaphragmatic hernia and microphthalmia-evaluation of DSEL as a candidate gene for the diaphragmatic defect. American journal of medical genetics. Part A 30 20358601
2019 Novel multiplex strategy for DNA methylation-based age prediction from small amounts of DNA via Pyrosequencing. Forensic science international. Genetics 22 31648151
2018 CCDC102B functions in centrosome linker assembly and centrosome cohesion. Journal of cell science 21 30404835
2002 Delineation and candidate gene mutation screening of the 18q22 minimal region of deletion in head and neck squamous cell carcinoma. Oncogene 19 12118382
2022 Accurate age estimation from blood samples of Han Chinese individuals using eight high-performance age-related CpG sites. International journal of legal medicine 17 35819508
2021 Genome-wide identification of age-related CpG sites for age estimation from blood DNA of Han Chinese individuals. Electrophoresis 17 33978960
2022 Stabilization of CCDC102B by Loss of RACK1 Through the CMA Pathway Promotes Breast Cancer Metastasis via Activation of the NF-κB Pathway. Frontiers in oncology 11 35957886
2023 DNA methylation-based age estimation and quantification of the degradation levels of bisulfite-converted DNA. Legal medicine (Tokyo, Japan) 8 37923589
2020 Genetic and environmental factors related to the development of myopic maculopathy in Spanish patients. PloS one 7 32730261
2024 Exploring legal age estimation using DNA methylation. Forensic science international. Genetics 4 39243524
2024 Development and validation of a biomarker-based prediction model for metastasis in patients with colorectal cancer: Application of machine learning algorithms. Heliyon 4 39839508
2025 Enhanced fibrotic potential of COL1A1hiNR4A1low fibroblasts in ischemic heart revealed by transcriptional dynamics heterogeneity analysis at both bulk and single-cell levels. Frontiers in cardiovascular medicine 3 39834736
2024 Epigenetic-based age prediction in blood samples: Model development. Journal of forensic sciences 3 38308398
2026 The 12 o'clock assay: an optimized dodecaplex droplet digital PCR assay for robust DNA methylation quantification and epigenetic clock-based age-predictions. Clinical epigenetics 0 41877244
2026 A targeted epigenetic clock for simultaneous assessment of biological aging and cancer-associated methylation drift. Clinical epigenetics 0 41963974
2026 Chronological age estimation using CpG methylation signatures in Pakistani population. International journal of legal medicine 0 42252362
2025 A new robust AI/ML based model for accurate forensic age estimation using DNA methylation markers. Forensic science, medicine, and pathology 0 40085291

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