Affinage

LAMB1

Laminin subunit beta-1 · UniProt P07942

Length
1786 aa
Mass
198.0 kDa
Annotated
2026-06-10
32 papers in source corpus 15 papers cited in narrative 15 extracted findings
Cross-family judge vs UniProt: Affinage preferred faithfulness: 5/5 claims corpus-supported (100%)

Mechanistic narrative

Synthesis pass · prose summary of the discoveries below

LAMB1 encodes the laminin beta-1 chain, a large multidomain extracellular matrix glycoprotein built from cysteine-rich type A repeats, type B repeats, and globular and helical regions that contribute to basement membrane assembly (PMID:3611077). Its transcription is induced by retinoic acid through a cAMP/PKA-dependent enhancer that activates a C2-binding protein (PMID:9419418) and is driven in cancer by an ERK/c-Jun axis in which c-Jun binds the LAMB1 promoter directly (PMID:33435161), while its mRNA is stabilized post-transcriptionally by DDX24 binding a defined site in cooperation with nucleolin (PMID:35763670). As a secreted matrix protein, LAMB1 functions as an extracellular guidance and mechanotransduction cue: vascular LAMB1 forms a haptotactic gradient sensed by integrin alpha-6 to activate Rac1 and direct microglial precursor migration into the retina (PMID:41206867), and it binds focal adhesion kinase to convert substrate stiffness into MEK1/2 signaling (PMID:36519511). In disease and tumor contexts LAMB1 acts upstream of multiple intracellular cascades, promoting Wnt/β-catenin/VEGFA-driven angiogenesis (PMID:40221061) and NF-κB/HK2-driven glycolysis in glioma (PMID:39920513). A dominant missense mutation in mouse Lamb1 causes a dystonia-like movement disorder with abnormal cerebellar output (PMID:26705335), and human LAMB1 truncating variants cause leukoencephalopathy, acting either through cytosolic trapping of truncated protein (PMID:34606115) or, for late truncations, through secretion of a monomeric truncated form consistent with a gain-of-function mechanism (PMID:40237576).

Mechanistic history

Synthesis pass · year-by-year structured walk · 14 steps
  1. 1987 High

    Established the molecular identity of LAMB1 by defining its multidomain architecture and chromosomal location, providing the foundation for all subsequent functional work.

    Evidence cDNA cloning, sequence analysis, and chromosomal mapping by somatic cell hybrid and in situ hybridization

    PMID:3611077

    Open questions at the time
    • No functional assignment to individual domains
    • No structural model of assembled laminin
  2. 1997 Medium

    Resolved how LAMB1 transcription is induced developmentally, showing retinoic acid acts through a cAMP/PKA-dependent enhancer requiring a specific C2-binding factor.

    Evidence Dominant-negative PKA transfection, CAT reporter, DNase I hypersensitivity, and EMSA in F9 teratocarcinoma cells

    PMID:9419418

    Open questions at the time
    • Identity of the C2-binding protein not determined
    • Generalizability beyond F9 cells unclear
  3. 1997 Medium

    Mapped the cis-regulatory elements controlling tissue-specific LAMB1 expression, separating a minimal proximal promoter from distal elements needed in reproductive epithelia.

    Evidence Transgenic mouse promoter-lacZ reporter lines with two promoter fragments

    PMID:9447707

    Open questions at the time
    • Trans-acting factors at distal elements not identified
    • No link to protein function
  4. 2015 High

    Demonstrated a CNS role for LAMB1 beyond basement membranes, with a dominant missense mutation causing dystonia-like movement through abnormal cerebellar circuit output.

    Evidence Exome sequencing plus in vivo awake cerebellar electrophysiology and EMG in mutant mice

    PMID:26705335

    Open questions at the time
    • Molecular consequence of the missense change on laminin assembly unknown
    • Synaptic mechanism not directly defined
  5. 2021 Medium

    Defined the cellular pathology of recessive LAMB1 leukoencephalopathy, showing truncated protein escaping NMD is trapped in the cytosol rather than secreted.

    Evidence Western blotting with N- and C-terminal antibodies in patient fibroblasts plus collapsing variant analysis

    PMID:34606115

    Open questions at the time
    • Mechanism linking cytosolic trapping to neuropathology unresolved
    • Single-lab patient cell analysis
  6. 2021 Medium

    Placed LAMB1 downstream of oncogenic ERK signaling by showing c-Jun directly transactivates its promoter to drive gastric cancer growth.

    Evidence Overexpression/knockdown, ERK inhibitor, ChIP for c-Jun, and proliferation/invasion assays in gastric cancer cells

    PMID:33435161

    Open questions at the time
    • Downstream effectors of LAMB1 in gastric cancer not defined
    • Single-lab study
  7. 2022 High

    Identified a post-transcriptional control mechanism, showing DDX24 binds a defined LAMB1 mRNA site and stabilizes it via nucleolin to promote HCC progression.

    Evidence RIP mapping, mRNA stability assay, DDX24-nucleolin Co-IP, and in vitro/in vivo tumor models

    PMID:35763670

    Open questions at the time
    • Whether stabilization operates in non-tumor tissues unknown
    • Receptor/effector downstream of elevated LAMB1 protein not addressed
  8. 2023 Medium

    Established LAMB1 as a mechanotransducer, showing it binds FAK to convert substrate stiffness into MEK1/2 signaling during dentinogenesis.

    Evidence Co-immunoprecipitation, stiffness-variable PDMS substrates, and pathway Western blotting in odontoblast-like cells

    PMID:36519511

    Open questions at the time
    • Direct vs indirect LAMB1-FAK interaction not distinguished
    • Single-lab, single cell type
  9. 2025 High

    Defined a conserved haptotactic guidance function, showing vascular LAMB1 engages integrin alpha-6 to activate Rac1 and direct microglial precursor migration into the retina.

    Evidence Zebrafish live imaging, endothelial-specific conditional KO in mice, F-actin polarization and Rac1 activity assays

    PMID:41206867

    Open questions at the time
    • Structural basis of the LAMB1-Itga6 gradient not resolved
    • Other receptors contributing to migration not excluded
  10. 2025 Medium

    Distinguished the disease mechanism of late LAMB1 truncations, showing they uniquely secrete as monomers consistent with dominant gain-of-function, and confirmed a conserved BBB role.

    Evidence Drosophila LanB1 RNAi and rescue, immunofluorescence, and HEK293T variant secretion assays

    PMID:40237576

    Open questions at the time
    • How secreted monomeric truncated protein produces toxicity unknown
    • Human in vivo validation lacking
  11. 2025 Medium

    Placed LAMB1 upstream of pro-angiogenic Wnt signaling, showing knockdown reduces Wnt/β-catenin/VEGFA and impairs endothelial tube formation, rescuable by a Wnt agonist.

    Evidence siRNA knockdown in HUVECs, Wnt agonist rescue, tube formation and migration assays, scRNA-seq pseudotime

    PMID:40221061

    Open questions at the time
    • Receptor coupling LAMB1 to Wnt activation unidentified
    • Single-lab study
  12. 2025 Medium

    Linked LAMB1 to tumor metabolism, showing it drives NF-κB-dependent HK2 upregulation and glycolysis to support glioma growth and reduce TMZ sensitivity.

    Evidence Overexpression/knockdown, Seahorse ECAR, NF-κB inhibitor, and subcutaneous tumor model

    PMID:39920513

    Open questions at the time
    • Mechanism by which LAMB1 activates NF-κB unknown
    • Single-lab study
  13. 2026 Medium

    Extended LAMB1 signaling to bone-muscle crosstalk, showing recombinant LAMB1 promotes osteoclastogenesis via p38/JNK MAPK activation.

    Evidence In vitro osteoclastogenesis with recombinant LAMB1, TRAP staining, MAPK Western blotting, dual-tissue transcriptomics in an OVX model

    PMID:41690031

    Open questions at the time
    • Osteoclast receptor for LAMB1 not identified
    • Limited mechanistic detail beyond MAPK readout
  14. 2026 Medium

    Implicated LAMB1 in trophoblast function, showing silencing modulates the COL3A1/RAC1 axis to enhance invasion and improve outcomes in a subchorionic hematoma model.

    Evidence siRNA and in vivo knockdown, proteomic/transcriptomic analysis, SCH rat model, trophoblast functional assays

    PMID:41840580

    Open questions at the time
    • Direct molecular link between LAMB1 and COL3A1/RAC1 not established
    • Single-lab study

Open questions

Synthesis pass · forward-looking unresolved questions
  • How LAMB1's matrix structural role integrates with its diverse intracellular signaling outputs (FAK/MEK, Rac1, Wnt, NF-κB, MAPK) through specific receptors across tissues remains unresolved.
  • A unifying receptor logic for distinct downstream pathways is undefined
  • Structural model of LAMB1 within assembled laminin and basement membrane is lacking

Mechanism profile

Synthesis pass · controlled-vocabulary classification · explore literature graph →
Molecular activity
GO:0098631 cell adhesion mediator activity 2 GO:0005198 structural molecule activity 1
Localization
GO:0005576 extracellular region 2 GO:0031012 extracellular matrix 2 GO:0005829 cytosol 1
Pathway
R-HSA-162582 Signal Transduction 3 R-HSA-1266738 Developmental Biology 2 R-HSA-1474244 Extracellular matrix organization 2
Complex memberships
basement membranelaminin

Evidence

Reading pass · 15 per-paper findings extracted from the source corpus
Year Finding Method Journal Conf PMIDs
1987 Human LAMB1 encodes a 1786-amino acid multidomain protein with two types of internal homology repeats: type A repeats (~50 aa, 8 cysteines each) clustered near the NH2-terminus in two clusters of 5 and 8 consecutive repeats, and type B repeats (~40 aa) near the COOH-terminus, plus globular regions and helical structures. The LAMB1 gene was mapped to chromosome 7q22 by somatic cell hybrid methodology and in situ hybridization. cDNA cloning, sequence analysis, somatic cell hybrid methodology, in situ hybridization The Journal of biological chemistry High 3611077
1997 The LAMB1 gene is regulated by retinoic acid (RA) and cAMP/PKA signaling. In F9 teratocarcinoma cells partially deficient in PKA activity, cAMP-associated activation of the LAMB1 DNase I hypersensitivity site 2 enhancer was significantly decreased. EMSA showed reduced protein binding at the C2 motif within this enhancer in PKA-deficient cells after RA+cAMP treatment, and in vitro phosphorylation failed to rescue C2 binding, indicating PKA is required for induction of the C2-binding protein. Stable transfection of dominant-negative PKA regulatory subunit, chloramphenicol acetyltransferase (CAT) assay, DNase I hypersensitivity, electrophoretic mobility shift assay (EMSA), in vitro phosphorylation Cell growth & differentiation Medium 9419418
1997 The first 0.7 kb of LAMB1 5' flanking sequence is sufficient to direct expression in prospermatogonia cells of the testis, while additional elements within 4 kb 5' of the transcription start site are required for expression in oocytes and epithelial cells of mesonephric ducts, ductus deferens, ductus epididymis, and seminal vesicles. Transgenic mouse lines with LAMB1 promoter fragments fused to lacZ reporter gene; beta-galactosidase staining Differentiation; research in biological diversity Medium 9447707
2015 A dominant missense mutation in mouse Lamb1 (lamb1t) causes a dystonia-like movement disorder. Cerebellar recordings in awake mice detected abnormal output from Purkinje cells and their deep cerebellar nucleus targets during abnormal postures, implicating Lamb1 in synapse structure/plasticity in CNS circuits that regulate movement. The phenotype depends on interaction of brain and spinal cord circuits. SNP mapping, exome sequencing, in vivo electrophysiology (awake cerebellar recordings), electromyography showing co-contraction of opposing muscle groups eLife High 26705335
2021 LAMB1 truncating variants that escape nonsense-mediated mRNA decay produce truncated LAMB1 proteins that are trapped in the cytosol rather than being secreted to the extracellular matrix, as demonstrated using two antibodies recognizing N- and C-terminal parts of LAMB1 in endogenous patient fibroblasts. These variants cause a leukoencephalopathy with hippocampal memory defects. Western blotting with N- and C-terminal antibodies, gene-based collapsing test of rare protein-truncating variants in exome data, patient fibroblast analysis Annals of neurology Medium 34606115
2021 LAMB1 promotes gastric cancer cell growth and motility. The ERK inhibitor U0126 reduces LAMB1 expression, and c-Jun was shown to directly bind the LAMB1 promoter and regulate its transcription via the ERK pathway. LAMB1 overexpression and knockdown in gastric cancer cells, ERK inhibitor treatment, chromatin immunoprecipitation (c-Jun binding to LAMB1 promoter), cell proliferation/invasion/migration assays International journal of molecular sciences Medium 33435161
2022 DDX24 binds the mRNA of LAMB1 at nucleotides 618-624 and increases LAMB1 mRNA stability in a manner dependent on the interaction between nucleolin and the C-terminal region of DDX24, thereby promoting HCC cell migration and proliferation. RNA immunoprecipitation, mRNA stability assay, DDX24 overexpression/knockdown, Co-IP (DDX24-nucleolin interaction), in vitro and in vivo tumor models Cancer research High 35763670
2023 LAMB1 binds FAK (focal adhesion kinase) and this interaction converts mechanical substrate stiffness signals into biochemical signaling that controls MEK1/2 activity during dentinogenesis in odontoblast-like cells. Immunoprecipitation (LAMB1-FAK interaction), immunofluorescent staining, Western blotting, polydimethylsiloxane substrates of varying stiffness, qPCR Oral diseases Medium 36519511
2025 Vascular LAMB1 provides a haptotactic gradient sensed by Itga6 (integrin alpha-6) on retinal microglial precursors. Lamb1-Itga6 engagement activates Rac1 signaling, promoting F-actin polarization and directional migration of microglial precursors into the developing retina via blood vessels. Endothelial-specific LAMB1 deficiency in mice impairs microglial precursor settlement. Zebrafish live imaging, genetic interference with Lamb1/Itga6 axis, endothelial-specific conditional knockout in mice, F-actin polarization assay, Rac1 activity assay Cell reports High 41206867
2025 In Drosophila, the LAMB1 ortholog LanB1 localizes to the blood-brain barrier (BBB) in adult fly brains and is expressed in a subset of glial cells. Knockdown of LanB1 in the BBB results in short lifespan and locomotor defects. In vitro assay in HEK293T cells showed that late-truncated LAMB1 is uniquely detected as a monomer in culture medium (unlike full-length or early frameshift variants), suggesting dominant leukoencephalopathy variants act through a gain-of-function mechanism via secretion of truncated monomeric protein. Drosophila LanB1 knockdown (RNAi), immunofluorescence localization, in vivo overexpression/rescue experiments with variant alleles, HEK293T cell expression assay with Western blotting Human molecular genetics Medium 40237576
2025 LAMB1 promotes glioma cell glycolysis and proliferation via activation of the NF-κB pathway, which upregulates hexokinase 2 (HK2). Inhibition of NF-κB by Bay 11-7082 phenocopied LAMB1 knockdown in suppressing glycolysis (measured by ECAR) and tumor growth, and reducing TMZ sensitivity. LAMB1 overexpression/knockdown in glioma cells, Seahorse ECAR measurement, NF-κB pathway inhibitor (Bay 11-7082), Western blotting for HK2/NF-κB components, subcutaneous tumor model Discover oncology Medium 39920513
2025 LAMB1 knockdown suppresses Wnt/β-catenin signaling in endothelial cells, reducing expression of wnt3a, GSK-3β, β-catenin, and VEGFA, and impairing HUVEC proliferation, migration, and tube formation. The Wnt agonist HY-141873 partially rescued these defects, placing LAMB1 upstream of Wnt/β-catenin/VEGFA in angiogenesis during fracture healing. siRNA-mediated LAMB1 knockdown in HUVECs, Western blotting, Wnt agonist rescue experiment, tube formation assay, transwell migration assay, scRNA-seq pseudotime analysis Gene Medium 40221061
2026 Recombinant LAMB1 protein (rLAMB1) promotes osteoclast formation by activating the MAPK signaling pathway (phosphorylation of p38 and JNK). Muscle-secreted LAMB1 and CTGF were upregulated in bone in an OVX osteoporosis model and mediated bone-muscle crosstalk through MAPK activation. In vitro osteoclastogenesis assay with recombinant LAMB1, TRAP staining, Western blotting for MAPK phosphorylation, dual-tissue transcriptomics, protein-peptide docking Phytomedicine Medium 41690031
2026 LAMB1 silencing in trophoblast (HTR-8/SVneo) cells modulates the COL3A1/RAC1 axis: LAMB1 knockdown reduced pro-inflammatory cytokine levels, enhanced trophoblast proliferation/migration/invasion, and improved pregnancy outcomes in an LPS-induced SCH rat model. LAMB1 expression was positively correlated with COL3A1 and inversely with RAC1 in SCH tissues. LAMB1 knockdown (siRNA/in vivo), proteomic and transcriptomic analysis, in vivo SCH rat model, trophoblast functional assays (proliferation, migration, invasion), cytokine measurement BMC biology Medium 41840580
2025 In a cortical migration disorder model (co-activation of LIN28A and CTNNB1), spatially resolved proteome analysis revealed imbalances of extracellular matrix protein LAMB1 and its receptors RPSA and ITGB1, accompanied by a porous pial border and overmigration of neural cells, suggesting LAMB1 and its receptors are required for pial border integrity and cortical neuronal migration. Spatially resolved proteomics, mouse in utero co-activation of LIN28A/CTNNB1, histological analysis of cortical lamination bioRxivpreprint Low bio_10.1101_2024.08.01.606182

Source papers

Stage 0 corpus · 32 papers · ranked by NIH iCite citations
Year Title Journal Citations PMID
1987 Human laminin B1 chain. A multidomain protein with gene (LAMB1) locus in the q22 region of chromosome 7. The Journal of biological chemistry 174 3611077
2008 Translational bypass of nonsense mutations in zebrafish rep1, pax2.1 and lamb1 highlights a viable therapeutic option for untreatable genetic eye disease. Human molecular genetics 56 18809619
2021 Upregulation of LAMB1 via ERK/c-Jun Axis Promotes Gastric Cancer Growth and Motility. International journal of molecular sciences 45 33435161
2014 MiR-124-5p inhibits the growth of high-grade gliomas through posttranscriptional regulation of LAMB1. Neuro-oncology 45 24497408
2004 Examination of NRCAM, LRRN3, KIAA0716, and LAMB1 as autism candidate genes. BMC medical genetics 44 15128462
2015 Analysis of colorectal cancer glyco-secretome identifies laminin β-1 (LAMB1) as a potential serological biomarker for colorectal cancer. Proteomics 42 26359947
2022 RNA Helicase DDX24 Stabilizes LAMB1 to Promote Hepatocellular Carcinoma Progression. Cancer research 30 35763670
2015 A dystonia-like movement disorder with brain and spinal neuronal defects is caused by mutation of the mouse laminin β1 subunit, Lamb1. eLife 28 26705335
2024 Proteomic Identification of Small Extracellular Vesicle Proteins LAMB1 and Histone H4 for Prostate Cancer Diagnosis and Risk Stratification. Advanced science (Weinheim, Baden-Wurttemberg, Germany) 22 38590132
2000 The LAMB1 gene from the clubmoss, Lycopodium annotinum, is a divergent MADS-box gene, expressed specifically in sporogenic structures. Gene 22 10925200
2021 End-Truncated LAMB1 Causes a Hippocampal Memory Defect and a Leukoencephalopathy. Annals of neurology 15 34606115
2022 Excessive hydrogen sulfide causes lung and brain tissue damage by promoting PARP1/Bax and C9 and inhibiting LAMB1. Apoptosis : an international journal on programmed cell death 10 35119561
2017 The association of LAMB1 polymorphism and expression changes with the risk of coal workers' pneumoconiosis. Environmental toxicology 8 28444932
1997 Regulation of the laminin beta 1 (LAMB1), retinoic acid receptor beta, and bone morphogenetic protein 2 genes in mutant F9 teratocarcinoma cell lines partially deficient in cyclic AMP-dependent protein kinase activity. Cell growth & differentiation : the molecular biology journal of the American Association for Cancer Research 8 9419418
2021 Biallelic Variants in LAMB1 Causing Hydranencephaly: A Severe Phenotype of a Rare Malformative Encephalopathy. AJP reports 7 33542858
2018 Bilateral cerebellar cysts and cerebral white matter lesions with cortical dysgenesis: Expanding the phenotype of LAMB1 gene mutations. Clinical genetics 7 29888467
1997 Sequences 5' of the basement membrane laminin beta 1 chain gene (LAMB1) direct the expression of beta-galactosidase during development of the mouse testis and ovary. Differentiation; research in biological diversity 7 9447707
2025 LAMB1 downregulation suppresses glioma progression by inhibiting aerobic glycolysis through regulation of the NF-κB/HK2 axis. Discover oncology 4 39920513
2025 Lamb1-mediated Wnt/β-catenin signaling pathway drives endothelial angiogenesis for fracture healing. Gene 4 40221061
2025 LAMB1 promotes proliferation and metastasis in nasopharyngeal carcinoma and shapes the immune-suppressive tumor microenvironment. Brazilian journal of otorhinolaryngology 3 39874810
2025 Lnc-DARVR/miR-365-1-5p/LAMB1 axis regulates rotavirus replication via the complement C3 pathway. Journal of virology 3 40237496
2023 Substrate stiffness promotes dentinogenesis via LAMB1-FAK-MEK1/2 signaling axis. Oral diseases 3 36519511
2025 Functional analysis of pathogenic variants in LAMB1-related leukoencephalopathy reveals genotype-phenotype correlations and suggests its role in glial cells. Human molecular genetics 2 40237576
2025 Vascular Lamb1 guides the migration of retinal microglial precursors via Itga6-Rac1 signaling. Cell reports 2 41206867
2022 Compound variants of FKTN, POMGNT1, and LAMB1 gene identified by prenatal whole-exome sequencing in three fetuses with congenital hydrocephalus. The journal of obstetrics and gynaecology research 2 35843586
2025 LAMB1-associated leukoencephalopathy: a continuum from a prenatal, recessive syndrome to a dominant, adult-onset disorder. Neurogenetics 1 41364132
2026 Targeting muscle-bone crosstalk with hormone-like peptides: Systems approach reveals RGHGP-mediated suppression of LAMB1-MAPK osteoclastogenesis. Phytomedicine : international journal of phytotherapy and phytopharmacology 0 41690031
2026 LAMB1 regulates COL3A1 and RAC1 expression during subchorionic hemorrhage progression. BMC biology 0 41840580
2026 Endothelial SMAD1-MCAM axis facilitates sunitinib resistance and progression of clear cell renal cell carcinoma via LAMB1-ITGB1 signaling. Drug resistance updates : reviews and commentaries in antimicrobial and anticancer chemotherapy 0 41864072
2026 Strategy based on liquid crystal elastomer active tensile to accelerate bone repair: Mechanistic analysis of LAMB1-ITGB4 mediated PI3K-AKT signaling. Materials today. Bio 0 42211061
2025 Mannose-B from Codonopsis pilosula modulates LAMB1 expression to enhance trophoblast function and alleviate subchorionic hematoma. Scientific reports 0 40789880
2022 Evaluation of JUN, FN1 and LAMB1 polymorphisms in pterygium in a Chinese Han population. Ophthalmic genetics 0 35445627

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