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Showing WASHC4KIAA1033 is a alias.

WASHC4

WASH complex subunit 4 · UniProt Q2M389

Length
1173 aa
Mass
136.4 kDa
Annotated
2026-06-11
14 papers in source corpus 5 papers cited in narrative 7 extracted findings
Cross-family judge vs UniProt: Affinage preferred faithfulness: 5/5 claims corpus-supported (100%)

Mechanistic narrative

Synthesis pass · prose summary of the discoveries below

WASHC4 (SWIP) is a structural subunit of the pentameric WASH complex that governs endosomal protein sorting through Arp2/3-dependent actin polymerization (PMID:21498477, PMID:34599609). It is required for WASH complex integrity: a disease-associated missense mutation reduces SWIP levels and destabilizes the entire complex (PMID:21498477), and a knock-in of the equivalent P1019R substitution in mouse neurons recapitulates this destabilization while perturbing both endosomal and lysosomal pathways (PMID:33749590). WASHC4 anchors the WASH complex to endosomal membranes by two routes—the canonical retromer-linked interaction and a retromer-independent mode in which it directly binds phosphoinositides, particularly PI(3,5)P2, sustaining WASH/F-actin on endosomes even in the absence of VPS35 (PMID:36995008). Once recruited, it co-localizes with actin and promotes Arp2/3-dependent actin polymerization (PMID:34599609). Loss of WASHC4 disrupts endo-lysosomal trafficking and autophagy and, in zebrafish striated muscle, triggers ER stress through a VCP-interacting but UPS-independent mechanism (PMID:30010465); in patients, WASHC4 deficiency dysregulates proteins relevant for neuromuscular and muscle function (PMID:34599609), and its destabilization is linked to neurodegeneration in vivo (PMID:33749590).

Mechanistic history

Synthesis pass · year-by-year structured walk · 5 steps
  1. 2011 Medium

    Established that SWIP/WASHC4 is not merely peripheral but a structural component whose loss collapses the entire WASH complex, defining its core cellular role.

    Evidence Patient missense mutation analysis with protein-level and complex-stability assays

    PMID:21498477

    Open questions at the time
    • Did not resolve which structural interfaces SWIP contributes to complex assembly
    • No direct demonstration of downstream trafficking defects in this study
  2. 2018 Medium

    Connected WASHC4 loss to ER stress and impaired autophagy in vivo, and distinguished its phenotype from VCP despite their interaction, separating it from proteasomal degradation pathways.

    Evidence Zebrafish knockdown with proteasome, autophagy, and ER stress readouts in striated muscle

    PMID:30010465

    Open questions at the time
    • Mechanistic basis of the VCP interaction not defined
    • Whether ER stress is a direct consequence or downstream of trafficking failure unresolved
  3. 2021 High

    Provided in vivo causal linkage between the disease mutation, WASH complex destabilization, and endo-lysosomal dysfunction with neurodegeneration, and mapped the neuronal WASH interactome onto an endosomal network.

    Evidence Mouse P1019R knock-in with quantitative spatial proteomics and histology

    PMID:33749590

    Open questions at the time
    • Did not separate endosomal from lysosomal contributions to neurodegeneration
    • Causal chain from sorting defect to neuronal loss not fully traced
  4. 2021 Medium

    Demonstrated the molecular activity underlying WASHC4 function—co-localization with actin and direct promotion of Arp2/3-dependent polymerization—and linked WASHC4 deficiency to muscle protein-processing defects in patients.

    Evidence In vitro actin polymerization assay, immunostaining, proteomics, and CARS microscopy on patient fibroblasts and muscle biopsy

    PMID:34599609

    Open questions at the time
    • Whether WASHC4 itself or another subunit directly contacts Arp2/3 not resolved
    • Link between actin activity and muscle phenotype indirect
  5. 2023 High

    Identified a retromer-independent membrane anchoring mechanism, showing WASHC4 binds phosphoinositides (notably PI(3,5)P2) to recruit the WASH complex to endosomes even without VPS35.

    Evidence VPS35 knockout cells, phosphoinositide binding assays, and rescue experiments

    PMID:36995008

    Open questions at the time
    • Lipid-binding region of WASHC4 not structurally mapped
    • Relative in vivo contribution of retromer-dependent vs lipid-dependent recruitment unquantified

Open questions

Synthesis pass · forward-looking unresolved questions
  • How WASHC4-mediated endo-lysosomal and autophagy disruption mechanistically converges on neurodegeneration and muscle pathology remains unresolved.
  • No structural model of WASHC4 within the WASH complex
  • Causal pathway from trafficking failure to tissue-specific degeneration undefined

Mechanism profile

Synthesis pass · controlled-vocabulary classification · explore literature graph →
Molecular activity
GO:0005198 structural molecule activity 2 GO:0008092 cytoskeletal protein binding 1 GO:0008289 lipid binding 1
Localization
GO:0005768 endosome 2 GO:0005764 lysosome 1
Pathway
R-HSA-5653656 Vesicle-mediated transport 2 R-HSA-9612973 Autophagy 1
Partners
Complex memberships
WASH complex

Evidence

Reading pass · 7 per-paper findings extracted from the source corpus
Year Finding Method Journal Conf PMIDs
2011 A missense mutation in SWIP (WASHC4) causes significantly reduced SWIP protein levels and destabilization of the entire WASH complex, establishing SWIP as a structural component required for WASH complex integrity. Patient mutation analysis combined with functional studies showing reduced protein levels and WASH complex destabilization Human molecular genetics Medium 21498477
2018 WASHC4/SWIP interacts with VCP (valosin containing protein) in zebrafish, and targeted inactivation of Washc4 causes ER stress and impairs autophagy function in striated muscle without affecting the ubiquitin-proteasome system, distinct from VCP loss-of-function effects. Zebrafish knockdown model with functional assays for proteasome activity, autophagy, and ER stress markers Autophagy Medium 30010465
2021 The SWIP P1019R mutation (modeling the human WASHC4 disease mutation) destabilizes the WASH complex and causes significant perturbations in both endosomal and lysosomal pathways in neuronal cells, leading to endo-lysosomal disruption and neurodegeneration indicators. Mouse knock-in model with quantitative spatial proteomics, cellular and histological analyses eLife High 33749590
2021 The WASH complex neuronal proteome identified by quantitative proteomics reveals a network of endosomal proteins as interaction partners, positioning WASHC4/SWIP within an endosomal trafficking network in neurons. Quantitative spatial proteomics of neuronal WASH complex eLife Medium 33749590
2023 SWIP (WASHC4) mediates retromer-independent membrane recruitment of the WASH complex to endosomes by directly binding phosphoinositides, particularly phosphatidylinositol-3,5-bisphosphate (PI(3,5)P2), providing an anchor independent of the FAM21-VPS35 retromer interaction. VPS35 knockout cells demonstrating residual WASH complex/F-actin on endosomes; biochemical binding assays with phosphoinositide species; functional rescue experiments Traffic (Copenhagen, Denmark) High 36995008
2021 WASHC4 protein co-localizes with actin in cells and promotes Arp2/3-dependent actin polymerization in vitro, consistent with its role as a WASH complex subunit activating the Arp2/3 complex on endosomes. In vitro actin polymerization assay; immunostaining co-localization The Journal of pathology Medium 34599609
2021 Loss of functional WASHC4 in patient fibroblasts leads to dysregulation of proteins relevant for neuromuscular axis maintenance, and muscle biopsy from WASHC4-deficient patient shows dysregulation of proteins relevant for muscle function, indicating a role for WASHC4 in protein processing and clearance in muscle. Proteomic profiling of patient fibroblasts; immunostaining of muscle biopsy; coherent anti-Stokes Raman scattering microscopy The Journal of pathology Medium 34599609

Source papers

Stage 0 corpus · 14 papers · ranked by NIH iCite citations
Year Title Journal Citations PMID
2011 Identification of a novel candidate gene for non-syndromic autosomal recessive intellectual disability: the WASH complex member SWIP. Human molecular genetics 71 21498477
1999 SWiP-1: novel SOCS box containing WD-protein regulated by signalling centres and by Shh during development. Mechanisms of development 49 10354473
2021 Genetic disruption of WASHC4 drives endo-lysosomal dysfunction and cognitive-movement impairments in mice and humans. eLife 43 33749590
2015 Glial Expression of the Caenorhabditis elegans Gene swip-10 Supports Glutamate Dependent Control of Extrasynaptic Dopamine Signaling. The Journal of neuroscience : the official journal of the Society for Neuroscience 39 26109664
2018 Loss of the novel Vcp (valosin containing protein) interactor Washc4 interferes with autophagy-mediated proteostasis in striated muscle and leads to myopathy in vivo. Autophagy 36 30010465
2022 Calcium bursts allow rapid reorganization of EFhD2/Swip-1 cross-linked actin networks in epithelial wound closure. Nature communications 25 35524157
2018 Glial loss of the metallo β-lactamase domain containing protein, SWIP-10, induces age- and glutamate-signaling dependent, dopamine neuron degeneration. PLoS genetics 25 29590100
2017 The Atypical MAP Kinase SWIP-13/ERK8 Regulates Dopamine Transporters through a Rho-Dependent Mechanism. The Journal of neuroscience : the official journal of the Society for Neuroscience 21 28842414
2023 SWIP mediates retromer-independent membrane recruitment of the WASH complex. Traffic (Copenhagen, Denmark) 13 36995008
2020 Novel KIAA1033/WASHC4 mutations in three patients with syndromic intellectual disability and a review of the literature. American journal of medical genetics. Part A 12 31953988
2024 Glial swip-10 controls systemic mitochondrial function, oxidative stress, and neuronal viability via copper ion homeostasis. Proceedings of the National Academy of Sciences of the United States of America 10 39288174
2022 SWIP-a stabilized window for intravital imaging of the murine pancreas. Open biology 9 35702996
2021 Homozygous WASHC4 variant in two sisters causes a syndromic phenotype defined by dysmorphisms, intellectual disability, profound developmental disorder, and skeletal muscle involvement. The Journal of pathology 9 34599609
2023 Swip-1 promotes exocytosis of glue granules in the exocrine Drosophila salivary gland. Journal of cell science 5 36727484

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