| 2007 |
KDM4D (JMJD2D) forms a complex with ligand-bound androgen receptor (AR) via its C-terminus, interacting with the AR ligand binding domain, and acts as a coactivator of AR transcriptional activity in a catalytic-activity-dependent manner. |
Co-immunoprecipitation, domain-mapping pulldown, luciferase reporter assay with catalytic mutants |
Biochemical and biophysical research communications |
High |
17555712
|
| 2012 |
KDM4D (JMJD2D) demethylates H3K9me3/me2 and H1.4K26 and forms a complex with p53 tumor suppressor (interacting with p53's DNA binding domain), coactivating p53 target gene p21 in a catalytic-activity-dependent manner. |
In vitro pulldown, co-immunoprecipitation, luciferase reporter with catalytic mutants, cell-based overexpression |
PloS one |
High |
22514644
|
| 2014 |
KDM4D is rapidly recruited to DNA damage sites via its C-terminal region in a PARP1-dependent (but ATM-independent) manner; PARP1 ADP-ribosylates KDM4D after DNA damage, and KDM4D is required for efficient ATM substrate phosphorylation, chromatin association of ATM, Rad51 and p53BP1 foci formation, and both homology-directed repair and NHEJ. |
Live-cell imaging of laser-induced damage, co-immunoprecipitation, siRNA knockdown with functional DSB repair assays, domain mapping |
Proceedings of the National Academy of Sciences of the United States of America |
High |
24550317
|
| 2014 |
KDM4D binds RNA via two non-canonical RNA-binding domains (N-terminal aa 115-236 and C-terminal aa 348-523), independent of its demethylase activity; RNA interaction of the N-terminal region is required for KDM4D chromatin association and subsequent H3K9me3 demethylation in cells. |
RNA-binding assays, domain-deletion mapping, chromatin fractionation, H3K9me3 immunofluorescence in KDM4D mutant-expressing cells |
Nucleic acids research |
High |
25378304
|
| 2015 |
KDM4D binds poly(ADP-ribose) (PAR) in vitro via its C-terminal region, and this KDM4D-RNA interaction is also required for KDM4D accumulation at DNA breakage sites. |
In vitro PAR binding assay, live-cell imaging at laser-induced damage sites, RNA interaction domain mutants |
Cell cycle (Georgetown, Tex.) |
Medium |
25714495
|
| 2016 |
KDM4D demethylates H3K9me3 at DNA replication origins, interacts with replication proteins, and its recruitment depends on pre-replicative complex components ORC and MCM; KDM4D depletion impairs loading of Cdc45, PCNA, and polymerase δ but not ORC/MCM, demonstrating a role in pre-initiative complex formation for DNA replication. |
siRNA knockdown, H3K9M rescue experiment, co-immunoprecipitation with replication proteins, ChIP at origins, replication assays |
Nucleic acids research |
High |
27679476
|
| 2017 |
KDM4D was identified as a potential demethylase of H3K79me3 using chemically synthesized trimethylated H3K79 as substrate in an in vitro demethylase assay. |
Total chemical synthesis of H3K79me3 histone; in vitro demethylase activity assay |
Bioorganic & medicinal chemistry |
Medium |
28434780
|
| 2018 |
KDM4D (JMJD2D) physically interacts with β-catenin and demethylates H3K9me3 at promoters of β-catenin target genes (MYC, CCND1, MMP2, MMP9) to activate their transcription and promote colorectal cancer cell proliferation. |
Co-immunoprecipitation, chromatin immunoprecipitation, promoter-luciferase assay, KO mouse models |
Gastroenterology |
High |
30472235
|
| 2018 |
KDM4D directly interacts with the HIF1β gene promoter and activates HIF1β expression via H3K9me3 and H3K36me3 demethylation, promoting VEGFA-dependent tumor angiogenesis. |
ChIP assay, luciferase reporter, siRNA knockdown, in vitro and in vivo tumor models |
Molecular cancer |
Medium |
30060750
|
| 2018 |
KDM4D catalyzes H3K9 di- and tri-demethylation to promote TLR4 expression in hepatic stellate cells, subsequently activating NF-κB signaling and liver fibrogenesis. |
siRNA knockdown, ChIP, transcriptome analysis, in vivo CCl4 fibrosis model |
EBioMedicine |
Medium |
30527625
|
| 2020 |
KDM4D (JMJD2D) interacts with Gli2 and reduces H3K9me3 levels at Hedgehog target gene promoters to promote their expression, facilitating colonic regeneration and tumorigenesis. |
Co-immunoprecipitation, chromatin immunoprecipitation, siRNA knockdown, JMJD2D-KO mouse colitis model |
Oncogene |
High |
32094404
|
| 2020 |
KDM4D (JMJD2D) activates HIF1 signaling through three mechanisms: (1) cooperating with SOX9 to enhance mTOR expression and HIF1α translation; (2) cooperating with c-Fos to enhance HIF1β transcription; (3) interacting with HIF1α to enhance glycolytic gene expression; all dependent on demethylase activity. |
siRNA knockdown, rescue overexpression experiments, ChIP, demethylase-defective mutant analysis |
Oncogene |
Medium |
32989255
|
| 2020 |
KDM4D (JMJD2D) promotes liver cancer stem cell self-renewal by reducing H3K9me3 at the EpCAM promoter via interaction with β-catenin/TCF4, and at the Sox9 promoter via interaction with Notch1 intracellular domain. |
Co-immunoprecipitation, chromatin immunoprecipitation, shRNA knockdown, rescue experiments, in vivo xenograft |
The Journal of biological chemistry |
Medium |
33434575
|
| 2020 |
KDM4D (JMJD2D) directly interacts with p53 and inhibits p53 recruitment to the p21 and PUMA promoters in a demethylase-activity-independent manner, acting as a novel p53 antagonist to promote liver cancer. |
Co-immunoprecipitation, chromatin immunoprecipitation, EMSA, shRNA knockdown, KO mouse DEN-induced liver cancer model |
Theranostics |
High |
32754284
|
| 2020 |
KDM4D interacts with NFIB and MLL1 complex; KDM4D-mediated demethylation of H3K9me3 at PPARγ and C/EBPα promoters is required for NFIB and MLL1 complex to deposit H3K4me3 and activate adipogenic gene expression, acting upstream of these activators. |
Co-immunoprecipitation, ChIP, siRNA knockdown, rescue by exogenous expression in C3H10T1/2 cells |
Scientific reports |
Medium |
32080306
|
| 2021 |
KDM4D transcriptionally activates SYVN1 (an E3 ubiquitin ligase) via H3K9me3 demethylation at its promoter, which then triggers ubiquitin-dependent degradation of HMGB1, suppressing esophageal squamous cell carcinoma progression. |
ChIP, in vitro ubiquitination assay, shRNA knockdown, in vivo xenograft |
Frontiers in oncology |
Medium |
34820329
|
| 2021 |
KDM4D demethylates H3K9me3 at the MCL-1 promoter to promote MCL-1 expression in acute myeloid leukemia cells. |
ChIP, siRNA knockdown, cell proliferation and apoptosis assays |
American journal of translational research |
Medium |
34017391
|
| 2021 |
KDM4D directly interacts with the JAG1 promoter and upregulates VEGFR-3 expression to promote tumor angiogenesis in clear cell renal cell carcinoma. |
ChIP, siRNA knockdown, in vitro angiogenesis assay, in vivo xenograft |
Cell death discovery |
Low |
34667158
|
| 2021 |
Crystal structures of KDM4D in complex with two inhibitors (OWS and 10r) at 2.0 Å resolution revealed inhibitor binding modes within the active site and a loop movement that blocks the histone-binding site upon ligand binding. |
X-ray crystallography at 2.0 Å |
Biochemical and biophysical research communications |
High |
33780862
|
| 2022 |
TRIM14 recruits deubiquitinases USP14 and BRCC3 to cleave K63-linked ubiquitin chains on KDM4D, preventing KDM4D from undergoing OPTN-mediated selective autophagy, thereby stabilizing KDM4D and sustaining H3K9me3 demethylation and proinflammatory cytokine (IL-12, IL-23) expression. |
Co-immunoprecipitation, ubiquitination assay, autophagy flux assay, dendritic cell KO models |
Proceedings of the National Academy of Sciences of the United States of America |
High |
35145029
|
| 2022 |
KDM4D (JMJD2D) coactivates SP-1 to promote IFNGR1 expression, which elevates STAT3-IRF1 signaling; JMJD2D also acts as a coactivator for the STAT3-IRF1 axis to enhance PD-L1 transcription in a demethylation-activity-dependent manner. |
Co-immunoprecipitation, ChIP, siRNA knockdown, demethylase-mutant rescue, in vivo tumor models with CD8+ T cell infiltration analysis |
Oncogene |
Medium |
35027670
|
| 2023 |
SET7/9 methylates KDM4D (JMJD2D) on K427; mutation of K427 reduces prostate cancer cell growth, invasion, and tumor formation, and alters transcription of downstream targets including CBLC and PLAGL1. |
In vitro methylation assay, site-directed mutagenesis (K427R), cell invasion and tumor growth assays, transcriptomic analysis |
Frontiers in oncology |
Medium |
38045004
|
| 2023 |
KDM4D (JMJD2D) stabilizes HBx protein by suppressing TRIM14-mediated ubiquitin-proteasome degradation, and acts as a co-activator of HBx on cccDNA to augment HBV transcription and replication. |
Co-immunoprecipitation, ubiquitylation assay, ChIP on cccDNA, siRNA knockdown in HBV-infected cells, KO mouse HBV model |
JHEP reports |
High |
37701334
|
| 2023 |
KDM4D cooperates with STAT3 and is recruited to the IL-17F promoter to demethylate H3K9me3, inducing IL-17F expression and subsequently β-defensin expression for host defense against enteric bacterial infection. |
Co-immunoprecipitation, ChIP, shRNA knockdown, JMJD2D-KO mouse Citrobacter rodentium infection model |
PLoS pathogens |
Medium |
38905308
|
| 2023 |
KDM4D is a positive regulator of type I interferon responses; it is pre-associated with enhancer regions and redistributes to inducible promoters upon stimulation, promoting enhancer RNA transcription and dynamic H3K9me2 demethylation at associated promoters. |
Knockdown and overexpression in MEFs, epigenomic analyses (ChIP-seq, RNA-seq), viral susceptibility assay |
Frontiers in immunology |
Medium |
37275914
|
| 2024 |
X-ray crystal structures of KDM4D bound to novel inhibitors (tetrazole and pyridine core compounds) revealed that flexible tails probe distal residues in the histone-binding site and a prominent loop movement blocks histone-binding site accessibility upon ligand binding. |
X-ray crystallography |
European journal of medicinal chemistry |
High |
38981336
|
| 2024 |
KDM4D is required for male fertility; Kdm4d mutant male mice show impaired sperm motility and subfertility, associated with altered H3K9me3 distribution in round spermatids, demonstrating KDM4D-mediated H3K9me3 adjustment is needed for motile sperm generation. |
Kdm4d KO mouse generation, sperm motility assay, H3K9me3 immunofluorescence in spermatids |
The Journal of reproduction and development |
Medium |
39034148
|
| 2024 |
KDM4D's H3K9me3 demethylase activity is iron-dependent; under iron deficiency, KDM4D activity decreases, increasing H3K9me3 at the PIK3R3 promoter, suppressing PIK3R3 expression and inhibiting quiescent MSC activation via the PI3K-Akt-Foxo1 pathway. |
Iron chelation experiments, ChIP at PIK3R3 promoter, PI3K-Akt-Foxo1 pathway rescue, iron-deficient mouse model with bone mass measurement |
Cellular and molecular life sciences |
Medium |
39158700
|
| 2023 |
KDM4D binds RPS5 physically via a specific structural domain and the KDM4D-RPS5 complex promotes osteo/dentinogenic differentiation of stem cells of the apical papilla; ChIP showed KDM4D demethylates H3K9me2/me3 at the CNR1 promoter, and disruption of the KDM4D-RPS5 binding abolishes differentiation. |
Co-immunoprecipitation, ChIP, shRNA knockdown, overexpression, alizarin red staining |
Oral diseases |
Medium |
36579641
|