Affinage

JMY

Junction-mediating and -regulatory protein · UniProt Q8N9B5

Length
988 aa
Mass
111.4 kDa
Annotated
2026-04-28
27 papers in source corpus 15 papers cited in narrative 15 extracted findings

Mechanistic narrative

Synthesis pass · prose summary of the discoveries below

JMY is a multifunctional actin nucleation factor that integrates cytoskeletal remodeling with transcriptional regulation, autophagy, and apoptosis. It nucleates actin filaments by two mechanisms — direct Spire-like nucleation via tandem WH2 domains and Arp2/3 complex activation via its C-terminal WCA module — and its nucleocytoplasmic distribution is governed by actin monomer occupancy of a WH2/NLS overlap region that blocks importin binding when G-actin is bound (PMID:19287377, PMID:22262458). In the cytoplasm, JMY promotes cell migration, Golgi vesicular trafficking, oligodendrocyte morphogenesis, and LC3-mediated phagophore actin assembly during autophagy, while also driving Arp2/3-dependent mitochondrial permeabilization during DNA damage-induced apoptosis; additionally, JMY activates MRTF-A by competing with RPEL motifs for G-actin independently of its nucleation activity (PMID:30463620, PMID:33872315, PMID:30593260, PMID:25015719). In the nucleus, JMY functions as a p53 cofactor whose Arp2/3-dependent actin nucleation is required for transcriptional activation of DNA repair genes such as XPC and XRCC5, and its protein levels are controlled by Mdm2-mediated ubiquitin-dependent degradation and transcriptionally induced by HIF-1α under hypoxia (PMID:37142657, PMID:17170761, PMID:21625218).

Mechanistic history

Synthesis pass · year-by-year structured walk · 11 steps
  1. 2006 High

    Establishing how JMY protein levels are controlled resolved a key regulatory question: Mdm2 directly targets JMY for ubiquitin-dependent degradation via its RING finger domain, independently of p53, explaining how DNA damage stabilizes JMY to augment p53 cofactor function.

    Evidence Ubiquitination assays, Mdm2 RING mutants, pharmacological Mdm2 inhibition, and immunoblotting in human cell lines

    PMID:17170761

    Open questions at the time
    • Identity of deubiquitinases that counteract Mdm2-mediated JMY turnover unknown
    • No structural basis for Mdm2-JMY recognition
  2. 2009 High

    The discovery that JMY possesses dual actin nucleation activities — Arp2/3 activation via WCA and Spire-like nucleation via tandem WH2 domains — established it as the first protein combining both mechanisms, redefining JMY from a transcriptional cofactor to a cytoskeletal regulator of cell motility.

    Evidence In vitro pyrene-actin nucleation assays, Arp2/3 activation assays, RNAi and overexpression in HL-60 and adherent cells, live-cell migration imaging

    PMID:19287377

    Open questions at the time
    • Mechanism of autoinhibition of full-length JMY not resolved in this study
    • Relative contributions of Arp2/3-dependent versus Spire-like nucleation in vivo unclear
  3. 2011 High

    Multiple studies collectively revealed JMY's functional breadth: autoinhibition suppresses full-length JMY's nucleation in cells, JMY is transcriptionally induced by HIF-1α to drive hypoxic migration, and JMY is required for asymmetric division in oocyte meiosis.

    Evidence In vitro nucleation and bead motility assays identifying autoinhibition (PMID:21965285); ChIP/reporter assays for HIF-1α at JMY promoter plus siRNA migration assays under hypoxia (PMID:21625218); RNAi and antibody injection in mouse oocytes with spindle migration phenotyping (PMID:21266449)

    PMID:21266449 PMID:21625218 PMID:21965285

    Open questions at the time
    • Mechanism by which autoinhibition is relieved in vivo unresolved
    • Whether HIF-1α-driven JMY induction uses the same nucleation mode as normoxic JMY unclear
    • Role of JMY's nuclear vs cytoplasmic pools in oocyte maturation not distinguished
  4. 2012 High

    A key question — how does JMY switch between cytoplasmic and nuclear pools? — was answered by demonstrating that the WH2 domains overlap with the NLS, so G-actin binding occludes importin recognition; DNA damage-induced actin polymerization frees the NLS for importin-β-mediated nuclear import.

    Evidence WH2/NLS mutagenesis, importin binding assays, subcellular fractionation, live-cell imaging, pharmacological actin perturbation

    PMID:22262458

    Open questions at the time
    • Post-translational modifications that may further regulate nuclear import not identified
    • Kinetics of NLS exposure in living cells not quantified
  5. 2014 Medium

    Extending JMY's cytoplasmic roles beyond migration, JMY was shown to localize to vesiculo-tubular structures and interact with VAP-A, with overexpression dispersing the Golgi and impairing VSV-G anterograde transport, implicating JMY in actin-dependent vesicular trafficking at the trans-Golgi network.

    Evidence Mass spectrometry interactome, co-immunoprecipitation of VAP-A, immunofluorescence co-localization, VSV-G transport assay

    PMID:25015719

    Open questions at the time
    • Overexpression-based phenotype; loss-of-function confirmation for trafficking role lacking
    • Whether JMY-VAP-A interaction is direct or mediated by a bridging factor not resolved
  6. 2018 High

    Two studies expanded JMY's functional repertoire: JMY activates MRTF-A by competing with RPEL motifs for G-actin in a nucleation-independent manner, and JMY is required for oligodendrocyte morphogenesis and myelination through actin-dependent protrusion dynamics.

    Evidence Recombinant actin competition assays, Arp2/3 inhibitor/knockdown confirming nucleation-independence, luciferase reporter for MRTF-A (PMID:30463620); RNAi in oligodendrocytes with live morphodynamics and neuron co-culture myelination assays (PMID:29732611)

    PMID:29732611 PMID:30463620

    Open questions at the time
    • Physiological relevance of JMY-MRTF-A axis in vivo not tested
    • Whether JMY's role in myelination requires nuclear or cytoplasmic activity undetermined
  7. 2019 High

    JMY's role in autophagy was mechanistically defined: membrane-bound LC3 directly recruits JMY to phagophores and stimulates its actin nucleation activity, while TTC5/STRAP antagonizes this recruitment, establishing a regulated actin-dependent step in autophagosome formation.

    Evidence In vitro reconstitution with LC3-decorated membranes, co-immunoprecipitation, cellular autophagy flux assays

    PMID:30593260

    Open questions at the time
    • Whether JMY's Spire-like or Arp2/3-dependent nucleation mode predominates at the phagophore unresolved
    • In vivo autophagy phenotype in JMY knockout animals not reported
  8. 2020 Medium

    Conditional knockout studies in mice demonstrated JMY's in vivo requirement: Sertoli cell-specific Jmy deletion impaired blood-testis barrier integrity, spermatid adhesion, and male fertility, with JMY interacting with α-actinin1 and SORBS2 to organize junctional actin; separately, irradiated glioblastoma stem cells use the HIF-1α→JMY pathway for radiation-induced migration.

    Evidence Sertoli cell-specific Jmy conditional knockout with sperm/BTB analysis and co-IP of partners (PMID:32279424); siRNA of JMY/HIF-1α in irradiated GSCs with migration and localization assays (PMID:33128011)

    PMID:32279424 PMID:33128011

    Open questions at the time
    • Mechanism linking JMY to BTB tight junction proteins not fully delineated
    • Whether JMY drives invasion or only migration in GSCs in vivo unknown
  9. 2021 High

    A long-standing question about JMY's pro-apoptotic function was mechanistically resolved: JMY drives DNA damage-induced intrinsic apoptosis through Arp2/3-dependent actin assembly near mitochondria, promoting cytochrome c release and caspase activation, while JMY loss upregulates the survival factor RhoD.

    Evidence CRISPR and siRNA inactivation of WASP-family genes, caspase/cytochrome c assays, immunofluorescence of actin-cytochrome c co-territories, gene expression analysis

    PMID:33872315

    Open questions at the time
    • How Arp2/3-nucleated actin physically promotes mitochondrial outer membrane permeabilization is mechanistically unresolved
    • Direct interaction between JMY-nucleated actin filaments and mitochondria not demonstrated
  10. 2023 High

    The nuclear function of JMY in DNA repair was mechanistically clarified: nuclear JMY uses Arp2/3-dependent actin nucleation to enable p53-dependent transcription of DNA repair genes (XPC, XRCC5, TP53I3), and JMY loss increases DNA damage accumulation and sensitizes cells to DDR kinase inhibitors.

    Evidence Transcriptomics, CRISPR knockout, siRNA, comet assay, domain mutant rescue, cell survival assays

    PMID:37142657

    Open questions at the time
    • How nuclear actin nucleation by JMY facilitates p53-dependent transcription at the chromatin level is unknown
    • Whether JMY nucleates actin at specific genomic loci or broadly in the nucleoplasm unresolved
  11. 2025 Medium

    JMY was placed downstream of a PCSK9→LIN28A→HES5 axis controlling microfilament integrity in neural progenitors, with JMY overexpression worsening neural tube defects in zebrafish PCSK9-loss models.

    Evidence PCSK9 knockout ESC/neural organoid models, transcriptome sequencing, zebrafish JMY overexpression

    PMID:40788992

    Open questions at the time
    • Whether endogenous JMY levels are rate-limiting for neural tube closure in mammals untested
    • Direct transcriptional regulation of JMY by HES5 not demonstrated at the promoter level

Open questions

Synthesis pass · forward-looking unresolved questions
  • Critical open questions remain: what relieves JMY's autoinhibition in specific cellular contexts, what is the structural basis for autoinhibition, and how does nuclear actin nucleated by JMY mechanistically facilitate p53-dependent transcription at target gene loci.
  • No crystal or cryo-EM structure of full-length JMY available
  • Activating signals or co-factors that relieve autoinhibition in vivo not identified
  • Functional separation of JMY's Spire-like vs Arp2/3-dependent activities in specific biological contexts incomplete

Mechanism profile

Synthesis pass · controlled-vocabulary classification · explore literature graph →
Molecular activity
GO:0008092 cytoskeletal protein binding 6 GO:0140110 transcription regulator activity 2
Localization
GO:0005634 nucleus 3 GO:0005829 cytosol 3 GO:0031410 cytoplasmic vesicle 2 GO:0005794 Golgi apparatus 1
Pathway
R-HSA-8953897 Cellular responses to stimuli 3 R-HSA-74160 Gene expression (Transcription) 2 R-HSA-5357801 Programmed Cell Death 1 R-HSA-73894 DNA Repair 1 R-HSA-9612973 Autophagy 1

Evidence

Reading pass · 15 per-paper findings extracted from the source corpus
Year Finding Method Journal Conf PMIDs
2009 JMY combines two actin nucleation activities: it activates the Arp2/3 complex via a WCA module and directly nucleates unbranched actin filaments via a Spire-like mechanism using tandem WH2 domains. Increased JMY expression enhances cell motility, loss of JMY slows migration, and upon differentiation of HL-60 cells into neutrophil-like cells, JMY translocates from the nucleus to the cytoplasm and concentrates at the leading edge. In vitro actin nucleation assays, Arp2/3 activation assays, RNAi knockdown, overexpression, live-cell imaging/immunofluorescence for localization Nature cell biology High 19287377
2006 Mdm2 targets JMY for ubiquitin-dependent proteasomal degradation via its RING finger domain, thereby suppressing p53 cofactor activity. This regulation is independent of the p53-binding domain in Mdm2 and of p53 activity itself. DNA damage increases JMY protein levels, and Mdm2 inhibitors induce JMY in unperturbed cells. Ubiquitination assays, small-molecule Mdm2 inhibitors, domain mutant analysis, immunoblotting EMBO reports High 17170761
2012 JMY's three WH2 domains overlap with an atypical bipartite nuclear localization sequence (NLS). Actin monomers bound to the WH2 domains block importin binding to the NLS and prevent nuclear import. Mutations impairing actin binding, or cellular conditions that reduce monomeric actin (e.g., actin polymerization), cause JMY nuclear accumulation. DNA damage induces cytoplasmic actin polymerization and nuclear import of JMY via importin β, requiring the WH2/NLS region. Mutagenesis of WH2 domains/NLS, importin binding assays, live-cell imaging, subcellular fractionation, pharmacological perturbation of actin dynamics Molecular biology of the cell High 22262458
2011 JMY is required for spindle migration, asymmetric division, and cytokinesis during mouse oocyte meiotic maturation. JMY localizes at the spindle and cytoplasm; RNAi depletion or antibody injection leads to symmetric division, failure of spindle migration, disrupted actin cap and cortical granule-free domain formation, and arrest at telophase I. RNAi knockdown, antibody injection, immunostaining, fluorescence microscopy in mouse oocytes Molecular human reproduction Medium 21266449
2011 Full-length JMY's actin nucleation activity is suppressed in cells compared to its isolated WWWCA domain, indicating intramolecular autoinhibition. The WWWCA domain is sufficient for actin-based bead motility in cytoplasmic extracts in an Arp2/3-dependent manner. Silencing JMY in neuronal cells enhances neurite formation, a function requiring JMY's actin nucleation activity, identifying JMY as a negative regulator of neuritogenesis. In vitro actin nucleation assays, bead motility assay in cytoplasmic extracts, RNAi knockdown, immunofluorescence Molecular biology of the cell High 21965285
2011 JMY is upregulated during hypoxia in a HIF-1α-dependent manner; HIF-1α is recruited to HIF-responsive elements in the JMY promoter and drives JMY transcription. JMY is required for enhanced cell motility and invasion under hypoxic conditions, as JMY depletion under hypoxia decreases migration. ChIP for HIF-1α at JMY promoter, luciferase reporter assays, siRNA knockdown, cell migration/invasion assays under hypoxia Oncogene High 21625218
2014 JMY localizes to dynamic vesiculo-tubular structures decorated with actin and Arp2/3 complex, interacts with VAP-A (involved in vesicle-based transport), and overexpression of JMY causes Golgi dispersal and impairs VSV-G anterograde transport from the trans-Golgi network, indicating a role in vesicular trafficking at the trans-Golgi region and ER membrane contact sites. Mass spectrometry interactome, co-immunoprecipitation, immunofluorescence co-localization, VSV-G transport assay, overexpression European journal of cell biology Medium 25015719
2018 JMY activates MRTF-A transcriptional activity and promotes its nuclear translocation via a nucleation-independent mechanism: JMY's WH2/V domains compete with MRTF-A's RPEL motifs for G-actin binding in the cytoplasm, freeing MRTF-A for nuclear entry. The C-terminal CA region of JMY exerts an autoinhibitory effect on this activity. MRTF-A activation by JMY is independent of Arp2/3 complex activity and F-actin. Co-immunoprecipitation, luciferase reporter assays, immunofluorescence, Arp3 knockdown, Arp2/3 inhibitor, latrunculin treatment, nuclear-restricted JMY constructs, recombinant actin competition assay Cell communication and signaling High 30463620
2019 During autophagy, LC3 recruits JMY to the phagophore membrane and promotes its actin nucleation activity; membrane-bound LC3 is sufficient to recruit JMY and stimulate JMY-mediated actin filament assembly in a reconstituted system. TTC5/STRAP acts as a negative regulator of autophagy by binding to JMY and antagonizing its activation at the phagophore. In vitro reconstitution with membrane-bound LC3, co-immunoprecipitation, cellular autophagy assays Autophagy High 30593260
2018 JMY is required for oligodendrocyte differentiation by modulating actin cytoskeleton dynamics; Jmy knockdown disrupts actin filament assembly and protrusion formation, preventing oligodendrocytes from acquiring an arborized morphology and reducing their ability to contact neurites and form myelin wraps in neuron co-cultures. RNAi knockdown, live-cell imaging, quantitative morphodynamics, neuron-oligodendrocyte co-culture myelination assay Glia Medium 29732611
2021 JMY and WHAMM are required for rapid DNA damage-induced intrinsic apoptosis in a p53-dependent pathway. JMY-mediated apoptosis requires Arp2/3-dependent actin nucleation; actin filaments assemble in cytoplasmic territories containing cytochrome c clusters and active caspase-3, and JMY loss reduces mitochondrial permeabilization and caspase cleavage. JMY loss also upregulates RhoD, which promotes cell survival. WASP-family gene inactivation (CRISPR/siRNA), caspase activation assays, cytochrome c release assay, immunofluorescence, gene expression analysis PLoS genetics High 33872315
2020 JMY affects Sertoli cell blood-testis barrier (BTB) function through remodeling of junctional integrity and controls endocytic vesicle trafficking; Sertoli cell-specific Jmy knockout in mice causes impaired BTB integrity, spermatid adhesion defects, sperm structural deformity, and reduced fertility. JMY interacts with α-actinin1 and SORBS2 (sorbin and SH3 domain containing protein 2) to regulate actin cytoskeletal organization. Conditional knockout (Sertoli cell-specific), co-immunoprecipitation, immunofluorescence, sperm analysis The FEBS journal Medium 32279424
2023 Nuclear JMY, via its Arp2/3-dependent actin nucleation function, is required for effective p53-dependent regulation of DNA repair target genes (XPC, XRCC5/Ku80, TP53I3/PIG3). JMY depletion or knockout leads to increased DNA damage accumulation, and cells show reduced survival and increased sensitivity to DNA damage response kinase inhibitors. Transcriptomics, CRISPR knockout, siRNA knockdown, comet assay/DNA damage markers, domain mutant rescue experiments, cell survival assays Cell death and differentiation High 37142657
2020 Ionizing radiation stabilizes HIF-1α in glioblastoma stem-like cells, which transcriptionally activates JMY; JMY then accumulates in the cytoplasm and promotes GSC migration via its actin nucleation-promoting activity, establishing a HIF1α→JMY→actin nucleation→motility pathway in irradiated GSCs. siRNA knockdown of JMY and HIF-1α, cell migration assays, immunofluorescence, irradiation experiments Scientific reports Medium 33128011
2025 PCSK9 loss disrupts the cellular microfilament network via the LIN28A/HES5/JMY axis: PCSK9 promotes LIN28A degradation via the lysosomal pathway; LIN28A is an RNA-binding protein that regulates JMY expression through the transcription factor HES5. JMY overexpression in zebrafish worsens neural tube defects caused by PCSK9 loss, confirming JMY as a downstream effector. PCSK9 knockout ESC/neural organoid/NPC models, transcriptome sequencing, zebrafish overexpression, lysosomal inhibition assays Advanced science Medium 40788992

Source papers

Stage 0 corpus · 27 papers · ranked by NIH iCite citations
Year Title Journal Citations PMID
2009 p53-cofactor JMY is a multifunctional actin nucleation factor. Nature cell biology 209 19287377
2010 WASH, WHAMM and JMY: regulation of Arp2/3 complex and beyond. Trends in cell biology 150 20888769
2006 Mdm2 targets the p53 transcription cofactor JMY for degradation. EMBO reports 64 17170761
2012 Actin binding to WH2 domains regulates nuclear import of the multifunctional actin regulator JMY. Molecular biology of the cell 50 22262458
2021 Exosomal miR-218-5p/miR-363-3p from Endothelial Progenitor Cells Ameliorate Myocardial Infarction by Targeting the p53/JMY Signaling Pathway. Oxidative medicine and cellular longevity 49 34326916
2011 JMY is required for asymmetric division and cytokinesis in mouse oocytes. Molecular human reproduction 49 21266449
2011 The actin nucleation factor JMY is a negative regulator of neuritogenesis. Molecular biology of the cell 35 21965285
2014 JMY is involved in anterograde vesicle trafficking from the trans-Golgi network. European journal of cell biology 33 25015719
2011 Hypoxia-driven cell motility reflects the interplay between JMY and HIF-1α. Oncogene 31 21625218
2018 Jmy regulates oligodendrocyte differentiation via modulation of actin cytoskeleton dynamics. Glia 27 29732611
2023 p53-dependent DNA repair during the DNA damage response requires actin nucleation by JMY. Cell death and differentiation 22 37142657
2018 The Role of JMY in p53 Regulation. Cancers 18 29857553
2017 Online flow cytometry, an interesting investigation process for monitoring lipid accumulation, dimorphism, and cells' growth in the oleaginous yeast Yarrowia lipolytica JMY 775. Bioresources and bioprocessing 16 28133594
2021 The actin nucleation factors JMY and WHAMM enable a rapid Arp2/3 complex-mediated intrinsic pathway of apoptosis. PLoS genetics 12 33872315
2014 JMY functions as actin nucleation-promoting factor and mediator for p53-mediated DNA damage in porcine oocytes. PloS one 12 25279558
2020 JMY expression by Sertoli cells contributes to mediating spermatogenesis in mice. The FEBS journal 11 32279424
2019 Regulation of JMY's actin nucleation activity by TTC5/STRAP and LC3 during autophagy. Autophagy 10 30593260
2014 JMY protein, a regulator of P53 and cytoplasmic actin filaments, is expressed in normal and neoplastic tissues. Virchows Archiv : an international journal of pathology 10 25280461
2009 Double JMY: making actin fast. Nature cell biology 9 19337319
2020 The HIF1α/JMY pathway promotes glioblastoma stem-like cell invasiveness after irradiation. Scientific reports 7 33128011
2015 Junction-mediating and regulatory protein (JMY) is essential for early porcine embryonic development. The Journal of reproduction and development 6 26052154
2024 Mmu_circ_0001148 promotes endothlial-mesenchymal transition via regulating miR-218-5p/JMY axis and drives progression of atherosclerosis. International journal of biological macromolecules 5 39736291
2025 m6A-modified circZNF548 regulates exosomal miR-7108-3p to activate CD3+CD8+ T cells and suppress NSCLC growth by JMY. BMC biology 4 40817234
2023 Changes of Ex Vivo Cervical Epithelial Cells Due to Electroporation with JMY. International journal of molecular sciences 4 38069185
2018 Regulation of MRTF-A by JMY via a nucleation-independent mechanism. Cell communication and signaling : CCS 3 30463620
2025 PCSK9 Loss-of-Function Disrupts Cellular Microfilament Network via LIN28A/HES5/JMY Axis in Neural Tube Defects. Advanced science (Weinheim, Baden-Wurttemberg, Germany) 1 40788992
2026 Junction-mediating and regulatory protein (JMY) is a promoting protein for radial migration of cortical neurons. Cell death discovery 0 41748532