Affinage

JAKMIP1

Janus kinase and microtubule-interacting protein 1 · UniProt Q96N16

Length
626 aa
Mass
73.2 kDa
Annotated
2026-06-10
11 papers in source corpus 9 papers cited in narrative 9 extracted findings
Cross-family judge vs UniProt: Affinage preferred faithfulness: 7/7 claims corpus-supported (100%)

Mechanistic narrative

Synthesis pass · prose summary of the discoveries below

JAKMIP1 (Marlin-1) is a microtubule-associated scaffold protein that couples GABA(B) receptor biology to cytoskeletal transport and post-transcriptional control in neurons (PMID:14718537, PMID:17532644). It associates specifically with the GABA(B)R1 subunit and binds the 3'-UTRs of both GABA(B)R1 and GABA(B)R2 mRNAs, restraining intracellular GABA(B)R2 protein levels (PMID:14718537). Through its N-terminal region it targets microtubule polymers and bundles them, while its C-terminal region binds the FERM domain of the JAK kinase Tyk2 and associates with Jak1 (PMID:15277531). JAKMIP1 bridges GABA(B) receptors to microtubules and the kinesin-I motor, and disruption of this complex impairs dendritic membrane transport of the receptors (PMID:17532644). Beyond receptor trafficking, JAKMIP1 is a component of polyribosomes and an RNP translational regulatory complex containing FMRP, DDX5, and PABPC1; its loss dysregulates neuronal mRNA translation during synaptic development and impairs glutamatergic NMDA receptor signaling (PMID:26627310). Loss-of-function disrupts Golgi integrity, downregulates kinesin-1, impairs neurite morphogenesis, and causes abnormal migration of newborn cortical pyramidal neurons in vivo (PMID:22828129). JAKMIP1 also functions outside the nervous system, where it restrains CD8+ T cell-mediated cytotoxicity (PMID:18941173).

Mechanistic history

Synthesis pass · year-by-year structured walk · 9 steps
  1. 2004 High

    Established JAKMIP1's founding link to neurotransmission by identifying it as a GABA(B)R1-binding partner that also binds GABA(B) receptor mRNAs and controls receptor subunit levels.

    Evidence Yeast two-hybrid, co-IP across yeast/cells/neurons, 3'-UTR RNA binding, and siRNA knockdown with Western readout

    PMID:14718537

    Open questions at the time
    • RNA-binding motif/domain in JAKMIP1 not mapped
    • mechanism by which mRNA binding limits GABA(B)R2 protein not resolved (stability vs. translation)
  2. 2004 Medium

    Defined JAKMIP1's bipartite architecture, linking a C-terminal JAK-kinase interaction (Tyk2 FERM domain, Jak1) to an N-terminal microtubule-targeting/bundling activity.

    Evidence Co-IP in Jurkat T cells, fibroblast overexpression with immunofluorescence, domain mapping

    PMID:15277531

    Open questions at the time
    • functional consequence of JAK binding not established
    • microtubule bundling shown only on overexpression in fibroblasts
  3. 2007 High

    Showed that JAKMIP1 acts as a transport adaptor by tethering GABA(B) receptors to microtubules and kinesin-I for dendritic trafficking.

    Evidence Biochemical fractionation, co-IP, FRAP live imaging, dominant-negative kinesin-I, microtubule disruption

    PMID:17532644

    Open questions at the time
    • directionality and cargo specificity of transport not fully defined
    • whether RNA-binding and transport functions are coupled is unaddressed
  4. 2008 Medium

    Extended JAKMIP1's GABA(B)/microtubule associations beyond brain by demonstrating them in testis and spermatozoa.

    Evidence Immunohistochemistry, immunofluorescence, microtubule co-sedimentation, co-IP in testis

    PMID:17668444

    Open questions at the time
    • no loss-of-function data in germ cells
    • functional role in spermatogenesis or sperm motility untested
  5. 2008 Medium

    Revealed a non-neuronal immunological function, identifying JAKMIP1 as a negative regulator of CD8+ T cell cytotoxicity.

    Evidence siRNA knockdown and lentiviral overexpression of full-length/N-terminal constructs in primary human CD8+ T cells with cytotoxicity assay

    PMID:18941173

    Open questions at the time
    • molecular mechanism linking JAKMIP1 to cytotoxic effector pathways unknown
    • relationship to JAK-kinase binding not tested
  6. 2009 Medium

    Provided ultrastructural confirmation of JAKMIP1's microtubule association in neurons in vivo and noted minor Golgi, ER, spine, and euchromatin distribution.

    Evidence Immunohistochemistry, immunofluorescence, pre-embedding electron microscopy in rodent brain

    PMID:19386132

    Open questions at the time
    • functional significance of nuclear/euchromatin pool not established
    • single-lab descriptive localization without perturbation
  7. 2012 High

    Demonstrated that JAKMIP1 is required for neuronal cytoskeletal/secretory integrity and cortical development through in vitro and in vivo loss-of-function.

    Evidence siRNA in cultured cortical neurons (Golgi, kinesin-1, neurite readouts), in utero electroporation RNAi for migration

    PMID:22828129

    Open questions at the time
    • mechanism connecting JAKMIP1 loss to kinesin-1 downregulation unresolved
    • whether Golgi disruption is cause or consequence of migration defect unclear
  8. 2015 High

    Placed JAKMIP1 in a polyribosome-associated RNP translational regulatory complex with FMRP/DDX5/PABPC1 and linked its loss to dysregulated synaptic translation and NMDAR signaling.

    Evidence Polyribosome fractionation, RNP complex co-IP/mass spectrometry, knockout mouse with electrophysiology and behavioral assays

    PMID:26627310

    Open questions at the time
    • specific mRNA targets translationally controlled by JAKMIP1 not enumerated
    • how RNP function integrates with microtubule/transport roles unresolved
  9. 2025 Low

    Proposed a role in IL-6/STAT3 signaling and neuritogenesis, with a putative nucleoplasmic C-terminal contribution to STAT3 regulation.

    Evidence siRNA knockdown in SH-SY5Y cells with IL-6/STAT3 readout and fluorescence microscopy (preprint)

    PMID:bio_10.1101_2025.10.21.683757

    Open questions at the time
    • preprint, single cell line
    • STAT3 regulation by C-terminus described as putative
    • mechanistic link to JAK-kinase binding not established

Open questions

Synthesis pass · forward-looking unresolved questions
  • How JAKMIP1's distinct activities — RNA binding/translational control, microtubule/kinesin-based transport, and JAK-kinase association — are mechanistically integrated within a single neuron remains unresolved.
  • no structural model relating the N-terminal microtubule and C-terminal JAK-binding regions to RNA-binding function
  • direct mRNA targets of the JAKMIP1 RNP complex undefined
  • whether JAK-kinase binding modulates any of the neuronal phenotypes is untested

Mechanism profile

Synthesis pass · controlled-vocabulary classification · explore literature graph →
Molecular activity
GO:0008092 cytoskeletal protein binding 3 GO:0060090 molecular adaptor activity 2 GO:0003723 RNA binding 1 GO:0045182 translation regulator activity 1
Localization
GO:0005856 cytoskeleton 3 GO:0005794 Golgi apparatus 2 GO:0005829 cytosol 2 GO:0005840 ribosome 1
Pathway
R-HSA-112316 Neuronal System 3 R-HSA-1266738 Developmental Biology 1 R-HSA-8953854 Metabolism of RNA 1 R-HSA-9609507 Protein localization 1
Complex memberships
Marlin-1/kinesin-I/tubulin transport complexpolyribosome-associated RNP translational regulatory complex (FMRP/DDX5/PABPC1)

Evidence

Reading pass · 9 per-paper findings extracted from the source corpus
Year Finding Method Journal Conf PMIDs
2004 Marlin-1 (JAKMIP1) associates specifically with the GABA(B)R1 subunit in yeast two-hybrid, tissue culture cells, and neurons, and binds the 3'-UTRs of both GABA(B)R1 and GABA(B)R2 mRNAs in vitro and in cultured neurons. siRNA-mediated knockdown of Marlin-1 results in enhanced intracellular levels of GABA(B)R2 protein without affecting GABA(B)R1 levels, indicating Marlin-1 regulates GABA(B)R2 subunit cellular levels. Yeast two-hybrid, co-immunoprecipitation, RNA binding assay (in vitro, 3'-UTR), siRNA knockdown with Western blot readout The Journal of biological chemistry High 14718537
2004 JAKMIP1 (Jamip1/Marlin-1) binds the FERM homology domain of Tyk2 (a JAK family kinase) via its C-terminal region, also associates with Jak1 in Jurkat T cells, and its N-terminal region targets the protein to microtubule polymers; overexpression in fibroblasts induces formation of tight, stable microtubule bundles. Co-immunoprecipitation in Jurkat T cells, overexpression in fibroblasts with immunofluorescence microscopy, domain mapping The Journal of biological chemistry Medium 15277531
2007 Marlin-1 (JAKMIP1) is associated with microtubules and the molecular motor kinesin-I in neurons. A fraction of Marlin-1 is mobile in dendrites of hippocampal neurons in a microtubule-dependent manner. GABA(B) receptors interact with kinesin-I, and disruption of the Marlin-1/kinesin-I/tubulin protein complex impairs intracellular membrane transport of GABA(B) receptors; a kinesin-I dominant-negative mutant severely impairs receptor transport. Biochemical fractionation, co-immunoprecipitation, live cell imaging (FRAP), dominant-negative kinesin-I overexpression, pharmacological microtubule disruption Molecular and cellular neurosciences High 17532644
2008 JAKMIP1 (Marlin-1) is expressed in testis (spermatogonia, spermatocytes, spermatozoa, Sertoli cells) and in spermatozoa it localizes predominantly to the tail. In testis, Marlin-1 associates with a microtubule fraction and with GABA(B) receptors, indicating these interactions are conserved outside the brain. Immunohistochemistry, immunofluorescence, biochemical fractionation (microtubule co-sedimentation), co-immunoprecipitation Journal of cellular biochemistry Medium 17668444
2008 Jakmip1 restrains T cell-mediated cytotoxicity: siRNA knockdown of Jakmip1 in primary CD8+ T cells enhances cytotoxic killing, whereas transduction of full-length Jakmip1 or its N-terminal region suppresses cytotoxicity. siRNA knockdown in primary human CD8+ T cells, lentiviral transduction of full-length or N-terminal domain constructs, cytotoxicity assay Journal of immunology Medium 18941173
2009 Marlin-1 (JAKMIP1) in the rodent brain localizes to dendrites and axons of both GABAergic and non-GABAergic hippocampal neurons; at the ultrastructural level it associates with microtubules in dendritic shafts and occasionally with the Golgi apparatus, endoplasmic reticulum, and dendritic spines, and nuclear clusters associate with euchromatin. Immunohistochemistry, immunofluorescence, pre-embedding electron microscopy BMC neuroscience Medium 19386132
2012 RNA interference of Marlin-1/Jakmip1 in cortical neurons disrupts Golgi apparatus integrity, down-regulates kinesin-1 levels, and impairs neurite morphogenesis in vitro. In vivo RNAi causes abnormal migration of newborn pyramidal neurons during cortical layering. In vitro siRNA in cultured neurons (immunofluorescence for Golgi, Western blot for kinesin-1), in utero electroporation RNAi for cortical migration assay Molecular and cellular neurosciences High 22828129
2015 JAKMIP1 is a component of polyribosomes and an RNP translational regulatory complex that includes FMRP (fragile X mental retardation protein), DDX5 (DEAD box helicase 5), and PABPC1 (poly(A) binding protein cytoplasmic 1). JAKMIP1 loss dysregulates neuronal mRNA translation during synaptic development and impairs glutamatergic NMDA receptor signaling. Polyribosome fractionation, co-immunoprecipitation/mass spectrometry of RNP complex, JAKMIP1 knockout mouse with electrophysiology (NMDAR signaling), behavioral assays Neuron High 26627310
2025 JAKMIP1 deficiency impairs IL-6/STAT3 signaling and IL-6-induced neuritogenesis in SH-SY5Y cells. The C-terminus of JAKMIP1 exhibits nucleoplasmic localization and may regulate STAT3 expression. siRNA knockdown in SH-SY5Y cells, IL-6 stimulation with STAT3 signaling readout, fluorescence microscopy for C-terminal domain localization bioRxivpreprint Low bio_10.1101_2025.10.21.683757

Source papers

Stage 0 corpus · 11 papers · ranked by NIH iCite citations
Year Title Journal Citations PMID
2004 Marlin-1, a novel RNA-binding protein associates with GABA receptors. The Journal of biological chemistry 48 14718537
2004 Jamip1 (marlin-1) defines a family of proteins interacting with janus kinases and microtubules. The Journal of biological chemistry 40 15277531
2015 JAKMIP1, a Novel Regulator of Neuronal Translation, Modulates Synaptic Function and Autistic-like Behaviors in Mouse. Neuron 35 26627310
2007 Marlin-1 and conventional kinesin link GABAB receptors to the cytoskeleton and regulate receptor transport. Molecular and cellular neurosciences 28 17532644
2007 Identification and expression analysis of novel Jakmip1 transcripts. Gene 16 17761393
2008 Jakmip1 is expressed upon T cell differentiation and has an inhibitory function in cytotoxic T lymphocytes. Journal of immunology (Baltimore, Md. : 1950) 15 18941173
2013 Overexpression of JAKMIP1 associates with Wnt/β-catenin pathway activation and promotes cancer cell proliferation in vitro. Biomedicine & pharmacotherapy = Biomedecine & pharmacotherapie 12 23481296
2008 Marlin-1 is expressed in testis and associates to the cytoskeleton and GABAB receptors. Journal of cellular biochemistry 9 17668444
2009 Cellular and subcellular localization of Marlin-1 in the brain. BMC neuroscience 8 19386132
2012 RNA interference of Marlin-1/Jakmip1 results in abnormal morphogenesis and migration of cortical pyramidal neurons. Molecular and cellular neurosciences 5 22828129
2015 JAKMIP1: Translating the Message for Social Behavior. Neuron 4 26687214

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