| 2001 |
ISG20/HEM45 protein functions as a 3' to 5' exonuclease in vitro, displaying a pH optimum of ~7.0, preferring Mn2+ as a metal cofactor, and degrading single-stranded RNA at a rate approximately 35-fold higher than single-stranded DNA. |
In vitro biochemical exonuclease assay with purified protein; metal cofactor and pH optimization experiments |
Biochemistry |
High |
11401564
|
| 2004 |
Crystal structure of human ISG20 at 1.9 Å resolution reveals it complexed with two Mn2+ ions and UMP; it belongs to the DEDDh group of RNases and its active site is structurally similar to DNases (E. coli DNA Pol III ε subunit and Exo I). Distinctive residues Met14 and Arg53 form hydrogen bonds with the 2'-OH of the UMP ribose, likely conferring RNA substrate preference. |
X-ray crystallography at 1.9 Å with Mn2+ and UMP ligands; structural comparison with homologs |
FEBS letters |
High |
15527770
|
| 2000 |
The ISG20 promoter lacks TATA and CAAT elements; basal transcriptional activity depends on Sp-1 and USF-1. A unique ISRE mediates both type I and type II IFN induction strictly dependent on IRF-1, and this ISRE also contributes to constitutive transcriptional activity. |
Promoter cloning, deletion analysis, reporter assays, EMSA for Sp-1, USF-1, and IRF-1 binding; dominant-negative and overexpression of transcription factors |
Nucleic acids research |
High |
10871365
|
| 2003 |
ISG20 exerts antiviral activity against RNA genomic viruses (VSV, influenza, EMCV) but not DNA adenovirus; it specifically inhibits VSV mRNA synthesis and protein production. Antiviral effect requires exonuclease activity, as the exonuclease-inactive mutant has no antiviral effect. The inactive mutant can inhibit ISG20 exonuclease activity in vitro (dominant-negative), and its expression reduces IFN-mediated VSV inhibition. |
Overexpression of wild-type and exonuclease-inactive ISG20 in HeLa cells; viral infection assays; mRNA and protein synthesis analysis; in vitro exonuclease inhibition by dominant-negative mutant |
The Journal of biological chemistry |
High |
12594219
|
| 2004 |
ISG20 induction by synthetic dsRNA (poly I:C) is stronger and faster than by IFN. Transcriptional activation of ISG20 by dsRNA involves initial NF-κB (p50/p65) binding to a κB element followed by IRF-1 binding to the ISRE. Contrary to IFN, dsRNA induces nuclear matrix enrichment of ISG20. |
Reporter assays; EMSA; chromatin-based binding assays; immunofluorescence/subcellular fractionation |
Oncogene |
Medium |
15064705
|
| 2005 |
ISG20 inhibits HIV-1 replication; antiviral effect requires the exonuclease activity of ISG20, as exonuclease-inactive mutant ISG20 shows no antiviral effect. HIV-1-induced apoptosis is significantly reduced in cells infected with HIV-1 expressing ISG20. |
HIV-1-derived virus expressing ISG20 (HIV-1NL4-3ISG20); replication kinetics in CEM cells and PBMCs; exonuclease-inactive mutant comparison |
The Journal of general virology |
Medium |
16033969
|
| 2006 |
Endogenous ISG20 localizes predominantly to the nucleolus (dense fibrillar component, the major site for rRNA processing) and Cajal bodies, in addition to diffuse cytoplasmic and nucleoplasmic distribution. ISG20 is associated with SMN-containing macromolecular nuclear complexes and with U1, U2 snRNAs, and U3 snoRNA. IFN treatment increases ISG20 accumulation in Cajal bodies. |
Immunofluorescence, electron microscopy, co-immunoprecipitation of SMN complexes, RNA immunoprecipitation for snRNAs/snoRNAs, coilin-dsRed coexpression |
Journal of cellular biochemistry |
Medium |
16514659
|
| 2010 |
ISG20 inhibits positive-strand RNA viruses including HCV, bovine viral diarrhea virus, hepatitis A virus, and yellow fever virus in a cell-type-specific manner, but not SARS-CoV in Huh7.5 cells. All antiviral effects require exonuclease activity. The closely related paralogs ISG20L1 and ISG20L2 do not inhibit HCV replication. |
Ectopic overexpression; exonuclease-inactive mutant comparison; viral replication assays across multiple virus families and cell types |
Virology |
Medium |
21036379
|
| 2017 |
ISG20 inhibits HBV replication by degrading HBV RNA. The susceptibility element was mapped to the HBV RNA terminal redundant region containing the epsilon (ε) stem-loop. ISG20 binds the ε stem-loop directly in vitro in the absence of other cellular proteins (EMSA), with the lower stem portion of ε being the major binding site. The C-terminal ExoIII domain of ISG20 is responsible for ε binding; deletion of ExoIII abolishes in vitro binding and intracellular HBV RNA degradation. Enzymatic-inactive ISG20D94G retains antiviral activity by preventing pgRNA encapsidation via ISG20-ε interaction even without degradation. |
EMSA (direct binding); ExoIII domain deletion; HBV ε structure mutants; ISG20D94G catalytic mutant; encapsidation assays; cellular HBV RNA decay assays |
PLoS pathogens |
High |
28399146
|
| 2018 |
ISG20 localizes primarily to Cajal bodies in the nucleus when ectopically expressed. In the context of alphavirus restriction, ISG20 does not directly degrade viral RNAs; instead, it upregulates over 100 other genes including IFIT1, an ISG that suppresses translation of alphavirus RNAs, leading to indirect inhibition of viral RNA translation. |
Inducible ectopic expression system; Isg20-/- mice; RNA-seq of ISG20-expressing cells; viral RNA degradation assays (negative finding for direct RNA degradation); IFIT1 protein quantification; alphavirus replication assays in wild-type vs Isg20-/- mice |
mSphere |
Medium |
30232164
|
| 2018 |
ISG20 exhibits potent antibunyaviral activity (Peribunyaviridae, Hantaviridae, Nairoviridae) but phleboviruses largely escape inhibition. Antibunyaviral activity depends on RNase activity. In vitro evolution of resistant BUNV mapped sequence determinants of ISG20 sensitivity/resistance. |
ISG-expression flow cytometry screen of ~500 ISGs; minigenome/VLP assay; exonuclease-inactive mutant; in vitro viral evolution for resistance mapping |
Journal of virology |
Medium |
29695422
|
| 2019 |
ISG20 inhibits VSV replication by decreasing viral protein synthesis without degrading viral RNA. ISG20 exerts translational control over non-self RNAs (including those from transfected DNA) while sparing endogenous transcripts. This activity correlates with ISG20's localization in cytoplasmic processing bodies (P-bodies). Murine ISG20 ortholog functions similarly; Isg20-/- mice show increased susceptibility to viral infection. |
VSV infection assays; ribosome profiling / translation assays; viral RNA stability assays (negative for degradation); subcellular localization by live imaging to P-bodies; Isg20-/- mouse infection model; non-self RNA transfection controls |
PLoS pathogens |
High |
31600344
|
| 2020 |
m6A-modified HBV transcripts are selectively recognized and degraded by ISG20. The m6A reader protein YTHDF2 acts as a cofactor: ISG20 forms a complex with YTHDF2 and m6A-modified HBV RNA (demonstrated using enzymatically inactive ISG20D94G). Silencing of m6A methyltransferases or YTHDF2 reduces ISG20-mediated HBV RNA degradation. m6A at position A1907 within the ε stem-loops is the critical site. |
ISG20D94G co-immunoprecipitation of YTHDF2 and m6A RNA; methyltransferase knockdown; YTHDF2 knockdown; HBV m6A site mutants (5', 3', both termini); HBV RNA decay assays |
PLoS pathogens |
High |
32059034
|
| 2021 |
ISG20 is required for IFN-induced degradation of HBV cccDNA. ISG20 is the only type I and II IFN-induced nuclear protein with annotated nuclease activity. ISG20 localizes to nucleoli of IFN-stimulated hepatocytes and is enriched on deoxyuridine-containing ssDNA mimicking APOBEC3A-deaminated HBV DNA. Co-expression of ISG20 with APOBEC3A is sufficient to diminish cccDNA; ISG20 depletion mitigates IFN-induced cccDNA loss. |
Transcriptome analysis; ISG20 overexpression and depletion; immunofluorescence localization; enrichment assay on deoxyuridine-ssDNA; APOBEC3A co-expression; HBV cccDNA quantification |
EMBO reports |
Medium |
33969602
|
| 2020 |
ISG20 promotes degradation of nascent spliceosomal U snRNA transcripts and unstable U1 snRNA variants. ISG20 and the nuclear exosome were biochemically identified as exonucleolytic factors acting on U snRNA precursors in vitro, but KD experiments showed they act in quality control of newly synthesized U snRNAs rather than as maturation factors per se. |
In vitro 3'-end maturation assay (newly developed); ISG20 and nuclear exosome knockdown; 3'-end sequencing of endogenous U1 snRNA |
Genes to cells |
Medium |
33147372
|
| 2023 |
RNA 2'O-methylation impedes ISG20-mediated RNA degradation. ISG20 pauses two nucleotides upstream of and at 2'O-methylated residues. Structure-function analysis identified ISG20 residues R53 and D90 as responsible for steric clash with 2'O-methylated nucleotides. Hypomethylated HIV-1 genomes (from FTSJ3-KO cells) are more susceptible to ISG20-mediated degradation in vitro and show impaired reverse transcription in T cells with IFN-induced ISG20. |
Biochemical RNA degradation assays with 2'O-methylated RNA substrates; site-directed mutagenesis of R53 and D90; FTSJ3-KO cells producing hypomethylated HIV-1; in vitro degradation comparison; T-cell infection assays with IFN |
Nucleic acids research |
High |
36354007
|
| 2016 |
ISG20 inhibits influenza A virus replication in an exonuclease-dependent manner, impairing viral polymerase activity and reducing replication and transcription of viral genes. ISG20 co-localizes and directly interacts with IAV nucleoprotein (NP); the exonuclease-inactive ISG20 mutant lacks this association, indicating NP interaction depends on ISG20 exonuclease activity. |
Overexpression and exonuclease-inactive mutant; viral polymerase activity assay; co-localization by immunofluorescence; co-immunoprecipitation of ISG20 with NP; viral titer and protein assays |
Virus genes |
Medium |
27342813
|
| 2023 |
ISG20 degrades RHOBTB3 mRNA, increasing HIF-1α protein expression and activating NANOG signaling; ISG20 also degrades STAT1 and IRF1 mRNAs, decreasing CXCL10 expression and impairing CD8+ T cell and NK cell recruitment. These functions are downstream of HIF-1-activated ISG20 transcription in TNBC. Silencing ISG20 increases sensitivity of mouse TNBC cells to anti-PD1 immunotherapy. |
ISG20 KD/OE in TNBC cells; mRNA stability assays for RHOBTB3, STAT1, IRF1; HIF-1α protein measurement; NANOG reporter; CXCL10 and immune cell recruitment assays; anti-PD1 checkpoint blockade in mouse model |
The Journal of experimental medicine |
Medium |
41385111
|
| 2024 |
Poly(A)-binding protein (PABP1) loading on the RNA 3' tail provides primary protection of cellular mRNAs against ISG20-mediated degradation. Terminal stem-loop RNA structures can also confer protection, depending on their thermodynamic stability. Histone mRNAs (non-polyadenylated, with a 3' stem-loop) show detectable ISG20-mediated decay, consistent with their lack of PABP1 loading. |
RNA-seq of ISG20-expressing cells; biochemical PABP1 loading assays; stem-loop stability analysis; histone mRNA quantification after ISG20 expression |
Life science alliance |
Medium |
38418089
|
| 2025 |
m6A modification in the EBOV genome 3'-leader region recruits m6A reader YTHDF1, which impedes ISG20 antiviral activity, thereby facilitating EBOV replication. Loss-of-function and mutational analyses confirm that m6A on the EBOV genome antagonizes ISG20 exonuclease activity. |
m6A mapping of EBOV genome; loss-of-function (ISG20 and YTHDF1 KD); m6A site mutations in EBOV genome; EBOV replication assays; co-immunoprecipitation of YTHDF1 with m6A-modified RNA and ISG20 |
International journal of biological macromolecules |
Medium |
41423124
|
| 2026 |
ISG20 inhibits HCMV and HSV-1 replication without degrading viral RNA or DNA; instead, ISG20 expression induces an innate immune defense gene signature comprising upregulation of other ISGs, zinc finger proteins, and transposable elements, amplifying IFN production and response. JAK-STAT inhibitor ruxolitinib rescues HCMV gene expression in ISG20-expressing cells, confirming the indirect mechanism via IFN signaling amplification. |
Overexpression and knockdown of ISG20; RNA-seq; half-life assays of viral RNA and DNA (negative for direct degradation); ruxolitinib JAK-STAT inhibition rescue experiment; single-cell RNA-seq |
PLoS pathogens |
Medium |
41511982
|