Affinage

IQUB

IQ motif and ubiquitin-like domain-containing protein · UniProt Q8NA54

Length
791 aa
Mass
92.6 kDa
Annotated
2026-06-10
12 papers in source corpus 7 papers cited in narrative 7 extracted findings
Cross-family judge vs UniProt: Affinage preferred faithfulness: 6/7 claims corpus-supported (86%)

Mechanistic narrative

Synthesis pass · prose summary of the discoveries below

IQUB is a ciliary/flagellar scaffold protein whose principal characterized role is the assembly of radial spoke 1 (RS1) on the axoneme of mammalian sperm flagella (PMID:36417862, PMID:39849482). Genetic ablation in mice and humans selectively abolishes RS1 — leaving RS2 and RS3 intact — and co-depletes the inner dynein arm components DNAH7 and DNAH12, reducing sperm motility and causing asthenospermia and male infertility (PMID:36417862, PMID:39849482). IQUB localizes to the RS1 stalk and is one of twelve identified RS1 components, where it acts as an adapter that nucleates spoke assembly (PMID:39849482). It interacts with the radial spoke head protein RSPH3 as well as CEP295NL, GSTM1, and ODF1, and recruits calmodulin under low-Ca²⁺ conditions to suppress the activity of an RSPH3/p-ERK1/2 non-typical AKAP complex during spoke assembly (PMID:36355624). Within the male germline, IQUB protein localizes to the acrosome and flagellum of mature spermatozoa and is expressed across spermatogenic stages (PMID:37732581). Beyond the flagellum, IQUB regulates primary cilium length in somatic cells, acting downstream of ARL3 — re-expression of IQUB rescues the elongated-cilia phenotype of ARL3 mutant fibroblasts (PMID:21289087, PMID:38457249). IQUB also promotes breast cancer cell proliferation and migration by activating Akt-mediated GSK3β phosphorylation and downstream Wnt/β-catenin signaling, with its loss causing G1 cell cycle arrest (PMID:29968965).

Mechanistic history

Synthesis pass · year-by-year structured walk · 7 steps
  1. 2011 Medium

    Established the first cellular function for IQUB by showing it constrains cilia length, identifying it as a ciliary regulator rather than an uncharacterized protein.

    Evidence siRNA knockdown with high-content immunofluorescence across three vertebrate cell lines and cargo transport assays

    PMID:21289087

    Open questions at the time
    • Molecular mechanism of length control not defined
    • No interacting partners identified
    • Single-lab knockdown without genetic confirmation
  2. 2018 Medium

    Revealed a non-ciliary signaling role, linking IQUB to a proliferative cascade and showing it is not exclusively a structural ciliary protein.

    Evidence Overexpression and knockdown in MCF-7 and MDA-MB-231 cells with GSK3β and proteasome inhibitors, proliferation/migration and cell cycle assays

    PMID:29968965

    Open questions at the time
    • Direct biochemical link between IQUB and Akt not established
    • Mechanism connecting ciliary scaffold function to oncogenic signaling unclear
    • Single cancer-type context
  3. 2022 High

    Defined IQUB's core structural function by showing it is selectively required for radial spoke 1 assembly in sperm flagella but dispensable for tracheal cilia spokes, explaining tissue-specific motility phenotypes.

    Evidence Iqub knockout mouse with TEM of sperm flagella and tracheal cilia and fertility assays

    PMID:36417862

    Open questions at the time
    • Reason for tissue selectivity (sperm vs trachea) not explained
    • Molecular interactions within RS1 not yet mapped
  4. 2023 Medium

    Identified IQUB's direct binding partners and a calmodulin/Ca²⁺-dependent regulatory mechanism, providing the molecular basis for how it controls radial spoke assembly.

    Evidence Yeast two-hybrid screen, reciprocal Co-IP, KO/KI mouse models, EM, and whole-exome sequencing of patients

    PMID:36355624

    Open questions at the time
    • AKAP-inhibition mechanism partly inferred from inhibitor studies
    • Calmodulin recruitment not structurally resolved
    • Stoichiometry of interactions undefined
  5. 2023 Medium

    Confirmed the subcellular distribution of IQUB protein in the male germline, localizing it to the acrosome and flagellum and across spermatogenic stages.

    Evidence Western blot and immunofluorescence with a newly generated antibody in wild-type mouse testis

    PMID:37732581

    Open questions at the time
    • No functional consequence tested in this study
    • Acrosomal role not mechanistically characterized
  6. 2024 Medium

    Placed IQUB in an ARL3-dependent pathway controlling cilia length via epistasis, connecting its somatic ciliary function to an upstream regulator.

    Evidence Patient-derived ARL3 mutant fibroblasts, RNA-seq, proteomics, and IQUB rescue with cilia morphology measurement

    PMID:38457249

    Open questions at the time
    • Mechanism by which ARL3 regulates IQUB expression unknown
    • Whether ARL3 acts on IQUB in flagella as in somatic cilia untested
  7. 2025 High

    Consolidated IQUB as an RS1 adapter/scaffold and defined RS1 composition, showing IQUB loss causes selective RS1 deficiency and co-dependent loss of inner dynein arm DNAH7/DNAH12 across human and mouse.

    Evidence Whole-exome sequencing of infertile males, Iqub-/- mouse, CASA, EM, mass spectrometry, structural modeling, and ICSI

    PMID:39849482

    Open questions at the time
    • Mechanism linking RS1 loss to inner dynein arm depletion not resolved
    • Structural model not experimentally validated
    • Order of assembly within RS1 stalk undefined

Open questions

Synthesis pass · forward-looking unresolved questions
  • How IQUB's structural role in radial spoke assembly mechanistically connects to its signaling functions in somatic cilia length control and Akt/Wnt-driven proliferation remains unresolved.
  • No unifying biochemical mechanism across flagellar, ciliary, and oncogenic contexts
  • Calmodulin/Ca²⁺ regulation not tested in somatic cilia
  • No structural data on full-length IQUB complexes

Mechanism profile

Synthesis pass · controlled-vocabulary classification · explore literature graph →
Molecular activity
GO:0005198 structural molecule activity 2 GO:0060090 molecular adaptor activity 2
Localization
GO:0005929 cilium 4 GO:0005856 cytoskeleton 2
Pathway
R-HSA-1474165 Reproduction 2 R-HSA-162582 Signal Transduction 2 R-HSA-1852241 Organelle biogenesis and maintenance 2
Complex memberships
radial spoke 1 (RS1)

Evidence

Reading pass · 7 per-paper findings extracted from the source corpus
Year Finding Method Journal Conf PMIDs
2011 siRNA knockdown of Iqub in vertebrate cell lines results in elongated cilia, establishing a role for IQUB in regulating cilia length. siRNA knockdown with high-content immunofluorescence microscopy (cilia number, length, cargo transport assays) Molecular biology of the cell Medium 21289087
2018 IQUB overexpression promotes breast cancer cell proliferation and migration by activating Akt, which phosphorylates GSK3β, in turn activating the Wnt/β-catenin signaling pathway; knockdown of IQUB inhibits these effects and causes G1 cell cycle arrest. IQUB overexpression and knockdown in MCF-7 and MDA-MB-231 cells combined with LiCl (GSK3β inhibitor) and MG-132 (proteasome inhibitor) treatment, proliferation/migration assays, cell cycle analysis Cancer medicine Medium 29968965
2022 IQUB is required for assembly of radial spoke 1 (RS1) specifically in sperm flagella but not in tracheal cilia of mice; Iqub knockout abolishes the entire RS1 in sperm flagella, causing male infertility due to sperm motility defects, while triple radial spokes remain intact in tracheal cilia. Iqub knockout mouse model, transmission electron microscopy of sperm flagella and tracheal cilia ultrastructure, fertility assays Cell reports High 36417862
2023 IQUB interacts with radial spoke head protein RSPH3, CEP295NL (DDC8), GSTM1, and ODF1 in yeast two-hybrid assays. Functionally, IQUB recruits calmodulin in low-Ca²⁺ environments to facilitate radial spoke assembly by inhibiting the activity of an RSPH3/p-ERK1/2 non-typical AKAP complex; loss of IQUB causes radial spoke defects and asthenospermia in humans and mice. Yeast two-hybrid protein interaction screen, Iqub knockout and knockin mouse models, co-immunoprecipitation, western blot, scanning and transmission electron microscopy, whole-exome sequencing of human patients Human reproduction (Oxford, England) Medium 36355624
2023 IQUB protein is localized to the acrosome and flagellum of mature spermatozoa, and is expressed in spermatogenic cells at different developmental stages in mouse testis. Western blot and immunofluorescence with newly generated rabbit polyclonal antibody against mouse IQUB in wild-type mouse testis Xi bao yu fen zi mian yi xue za zhi = Chinese journal of cellular and molecular immunology Medium 37732581
2024 IQUB is specifically downregulated in ARL3T31A/C118F mutant fibroblasts; re-expression of IQUB rescues the elongated cilia phenotype caused by these ARL3 mutations, placing IQUB downstream of ARL3 in a pathway controlling cilia length. Patient-derived transformed fibroblast cell lines, RNA-sequencing, proteomics, IQUB rescue overexpression with cilia morphology measurement FASEB journal Medium 38457249
2025 IQUB acts as an adapter/scaffold for RS1 assembly in both human and mouse sperm flagella; loss of IQUB causes selective RS1 deficiency (not RS2 or RS3), co-dependent loss of inner dynein arm components DNAH7 and DNAH12, and reduced sperm kinetic parameters. Twelve RS1 components were identified (RSPH3, RSPH6A, RSPH9, DYDC1, NME5, DNAJB13, PPIL6, AK8, ROPN1L, RSPH14, DYNLL1, IQUB), with IQUB localized to the RS1 stalk. Whole-exome sequencing of infertile males, Iqub-/- mouse model, computer-aided sperm analysis, electron microscopy, protein mass spectrometry, western blot, bioinformatic structural modeling, ICSI Cell communication and signaling : CCS High 39849482

Source papers

Stage 0 corpus · 12 papers · ranked by NIH iCite citations
Year Title Journal Citations PMID
2015 Whole genome and transcriptome sequencing of matched primary and peritoneal metastatic gastric carcinoma. Scientific reports 81 26330360
2011 Functional characterization of putative cilia genes by high-content analysis. Molecular biology of the cell 78 21289087
2013 Rare Genomic Variants Link Bipolar Disorder with Anxiety Disorders to CREB-Regulated Intracellular Signaling Pathways. Frontiers in psychiatry 33 24348429
2022 Differential requirements of IQUB for the assembly of radial spoke 1 and the motility of mouse cilia and flagella. Cell reports 26 36417862
2022 Combining bioinformatics, network pharmacology and artificial intelligence to predict the mechanism of celastrol in the treatment of type 2 diabetes. Frontiers in endocrinology 20 36339449
2018 Upregulated IQUB promotes cell proliferation and migration via activating Akt/GSK3β/β-catenin signaling pathway in breast cancer. Cancer medicine 20 29968965
2023 IQUB deficiency causes male infertility by affecting the activity of p-ERK1/2/RSPH3. Human reproduction (Oxford, England) 8 36355624
2025 IQUB mutation induces radial spoke 1 deficiency causing asthenozoospermia with normal sperm morphology in humans and mice. Cell communication and signaling : CCS 6 39849482
2024 Mechanisms underlying morphological and functional changes of cilia in fibroblasts derived from patients bearing ARL3T31A and ARL3T31A/C118F mutations. FASEB journal : official publication of the Federation of American Societies for Experimental Biology 6 38457249
2023 Transcriptome-wide profile of 1α,25 dihydroxyvitamin D3 in HTR-8/SVneo cells. The journal of obstetrics and gynaecology research 1 37277920
2026 IQ motif family genes in male infertility: pathogenesis, mechanisms, and clinical perspectives. Frontiers in reproductive health 0 41602861
2023 [Preparation and application of rabbit polyclonal antibody against mouse IQ and ubiquitin-like domain-containing protein (IQUB)]. Xi bao yu fen zi mian yi xue za zhi = Chinese journal of cellular and molecular immunology 0 37732581

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