Affinage

IQUB

IQ motif and ubiquitin-like domain-containing protein · UniProt Q8NA54

Length
791 aa
Mass
92.6 kDa
Annotated
2026-04-28
12 papers in source corpus 7 papers cited in narrative 7 extracted findings

Mechanistic narrative

Synthesis pass · prose summary of the discoveries below

IQUB is a structural component of the stalk of radial spoke 1 (RS1) in mammalian sperm flagella, essential for RS1 assembly, normal sperm motility, and male fertility (PMID:36417862, PMID:39849482). Within the RS1 complex, IQUB interacts with RSPH3 and recruits calmodulin under low-Ca²⁺ conditions to modulate the RSPH3/p-ERK1/2 signaling axis, and its deficiency causes selective RS1 loss with secondary downregulation of inner dynein arms DNAH7 and DNAH12 (PMID:36355624, PMID:39849482). IQUB also functions as a downstream effector of ARL3 in limiting primary cilia length; its depletion leads to cilia over-elongation, and re-expression rescues this phenotype (PMID:21289087, PMID:38457249). Homozygous loss-of-function IQUB mutations cause asthenoteratozoospermia and male infertility in humans (PMID:39849482).

Mechanistic history

Synthesis pass · year-by-year structured walk · 6 steps
  1. 2011 Medium

    Whether IQUB had any ciliary function was unknown; siRNA knockdown established that IQUB limits cilia length and participates in Hedgehog signaling, identifying it as a ciliary regulatory factor.

    Evidence siRNA knockdown with cilia length quantification and Gli-luciferase Hedgehog assay in three mammalian cell lines

    PMID:21289087

    Open questions at the time
    • Mechanism by which IQUB controls cilia length was not defined
    • Whether IQUB acts in motile cilia/flagella was untested
    • Upstream regulators of IQUB expression unknown
  2. 2018 Medium

    Whether IQUB influenced proliferative signaling outside the cilium was unknown; overexpression and knockdown showed IQUB activates the Akt/GSK3β/β-catenin pathway to promote breast cancer cell proliferation and migration.

    Evidence Gain- and loss-of-function with pharmacological epistasis (LiCl, MG-132) in MCF-7 and MDA-MB-231 breast cancer cells

    PMID:29968965

    Open questions at the time
    • Relevance to non-cancer physiology unclear
    • No in vivo tumor model validation
    • Mechanism linking IQUB's IQ domains to Akt activation not identified
  3. 2022 High

    The role of IQUB in motile flagella was unknown; Iqub knockout mice revealed that IQUB is essential for assembly of the entire radial spoke 1 in sperm flagella, causing male infertility, while being dispensable for RS1 in tracheal cilia.

    Evidence Iqub knockout mouse with cryo-electron tomography, transmission EM, and proteomics of sperm RS1

    PMID:36417862

    Open questions at the time
    • Precise position of IQUB within RS1 architecture was not resolved
    • Why tracheal cilia RS1 is independent of IQUB was unexplained
    • Downstream signaling consequences of RS1 loss not addressed
  4. 2023 Medium

    How IQUB contributes to RS1 assembly at the molecular level was unclear; interaction mapping and signaling analysis showed IQUB binds RSPH3 and calmodulin, and recruits calmodulin under low-Ca²⁺ conditions to inhibit the RSPH3/p-ERK1/2 complex, linking radial spoke assembly to an AKAP-like signaling module.

    Evidence Yeast two-hybrid screen, co-immunoprecipitation, Iqub KO/KI mouse models, Western blot for p-ERK1/2

    PMID:36355624

    Open questions at the time
    • Calmodulin recruitment mechanism lacks direct structural validation
    • Whether p-ERK1/2 dysregulation is a cause or consequence of RS1 disassembly is ambiguous
    • In vitro reconstitution of the IQUB–calmodulin–RSPH3 complex not performed
  5. 2024 Medium

    Whether IQUB's cilia-length role was connected to known ciliopathy pathways was unknown; IQUB was identified as a downstream effector of ARL3, with rescue of elongated cilia in ARL3-mutant patient fibroblasts confirming IQUB as the functional mediator.

    Evidence Patient-derived immortalized fibroblasts with ARL3 compound heterozygous mutations, RNA-seq, proteomics, IQUB re-expression rescue

    PMID:38457249

    Open questions at the time
    • Mechanism by which ARL3 regulates IQUB expression or stability not defined
    • Whether this pathway operates in motile cilia/flagella is untested
    • Single patient genotype limits generalizability
  6. 2025 High

    The precise structural position of IQUB in RS1 and its loss-of-function consequences in humans were undefined; a human frameshift mutation combined with mouse KO showed IQUB forms part of the RS1 stalk, and its loss selectively eliminates RS1 with secondary loss of inner dynein arms DNAH7 and DNAH12.

    Evidence Whole-exome sequencing of infertile patient, Iqub−/− mouse, mass spectrometry, EM, structural modeling

    PMID:39849482

    Open questions at the time
    • Atomic-resolution structure of the RS1 stalk with IQUB is lacking
    • How RS1 loss causes secondary inner dynein arm downregulation is mechanistically unresolved
    • Whether IQUB mutations contribute to female subfertility is unknown

Open questions

Synthesis pass · forward-looking unresolved questions
  • How IQUB's dual roles in primary cilia length regulation (via ARL3) and motile flagella RS1 assembly are coordinated, and the structural basis of IQUB-calmodulin interaction within the RS1 stalk, remain unresolved.
  • No atomic structure of IQUB or IQUB-containing RS1 complex
  • Tissue-specific regulation of IQUB's cilia-length vs. RS1-assembly functions not understood
  • Relationship between IQ-domain calmodulin binding and RS1 structural integrity undefined

Mechanism profile

Synthesis pass · controlled-vocabulary classification · explore literature graph →
Molecular activity
GO:0005198 structural molecule activity 2 GO:0098772 molecular function regulator activity 2
Localization
GO:0005929 cilium 5
Pathway
R-HSA-1852241 Organelle biogenesis and maintenance 4 R-HSA-1474165 Reproduction 2
Complex memberships
Radial spoke 1 (RS1)

Evidence

Reading pass · 7 per-paper findings extracted from the source corpus
Year Finding Method Journal Conf PMIDs
2011 siRNA knockdown of IQUB in mammalian cell lines results in elongated cilia, establishing IQUB as a regulator of cilia length without affecting ciliation per se; knockdown also affected Hedgehog signaling readouts, placing IQUB in the ciliary signaling pathway. siRNA knockdown + high-content immunofluorescence microscopy (cilia length, Gli3 transport, Gli-luciferase Hh assay) in three cell lines Molecular biology of the cell Medium 21289087
2018 IQUB overexpression promotes breast cancer cell proliferation and migration by activating Akt, which phosphorylates GSK3β, thereby activating the Wnt/β-catenin signaling pathway; IQUB knockdown causes G1 arrest and reduced migration, and co-treatment with Akt activator LiCl or proteasome inhibitor MG-132 confirmed the pathway order. Overexpression and siRNA knockdown in MCF-7/MDA-MB-231 cells + cell cycle analysis + migration assay + pharmacological epistasis (LiCl, MG-132) + Western blot for pathway components Cancer medicine Medium 29968965
2022 IQUB is required for assembly of radial spoke 1 (RS1) in mouse sperm flagella but is dispensable for RS1 in tracheal cilia; Iqub knockout mice lack entire RS1 in sperm, display sperm motility defects, and are male-infertile, identifying IQUB as an essential RS1 component in mammalian flagella and defining the RS1 protein composition. Iqub knockout mouse model + cryo-electron tomography/transmission electron microscopy of sperm ultrastructure + proteomics of RS1 composition Cell reports High 36417862
2023 IQUB interacts with RSPH3, CEP295NL/DDC8, GSTM1, and ODF1 (yeast two-hybrid); in sperm lacking IQUB (knockout/knockin mouse), radial spoke assembly is defective and p-ERK1/2 activity is dysregulated via RSPH3; mechanistically, IQUB recruits calmodulin in low-Ca²⁺ environments to facilitate normal radial spoke assembly by inhibiting the RSPH3/p-ERK1/2 complex (a non-typical AKAP). Yeast two-hybrid protein interaction screen + Iqub KO and KI mouse models + co-immunoprecipitation + Western blot for p-ERK1/2 + scanning and transmission electron microscopy of sperm ultrastructure Human reproduction Medium 36355624
2023 IQUB protein is localized to the acrosome and flagellum of mature spermatocytes and is expressed across multiple stages of spermatogenic cells in mouse testis, as determined by immunofluorescence with a validated polyclonal antibody. Immunofluorescence histochemistry and Western blot of mouse testis sections using recombinant-protein-generated polyclonal antibody Xi bao yu fen zi mian yi xue za zhi Medium 37732581
2024 IQUB deficiency (caused by ARL3 compound heterozygous mutation-driven downregulation) results in over-elongated cilia, and re-expression of IQUB rescues the elongated cilia phenotype in ARL3T31A/C118F patient-derived fibroblasts, establishing IQUB as a downstream effector of ARL3 that limits cilia length. Patient-derived immortalized fibroblasts + RNA-seq + proteomics + IQUB rescue experiment + cilia length measurement by microscopy FASEB journal Medium 38457249
2025 IQUB forms part of the stalk of RS1 in human and mouse sperm flagella; IQUB deficiency (homozygous frameshift mutation) causes selective RS1 loss (not RS2 or RS3) and secondary downregulation of inner dynein arms DNAH7 and DNAH12; proteomic analysis identified twelve RS1 components including RSPH3, RSPH6A, RSPH9, DYDC1, NME5, DNAJB13, PPIL6, AK8, ROPN1L, RSPH14, DYNLL1, and IQUB itself. Whole-exome sequencing of patient + Iqub−/− mouse model + protein mass spectrometry + Western blot + electron microscopy + structural modeling of RS1 Cell communication and signaling High 39849482

Source papers

Stage 0 corpus · 12 papers · ranked by NIH iCite citations
Year Title Journal Citations PMID
2015 Whole genome and transcriptome sequencing of matched primary and peritoneal metastatic gastric carcinoma. Scientific reports 81 26330360
2011 Functional characterization of putative cilia genes by high-content analysis. Molecular biology of the cell 77 21289087
2013 Rare Genomic Variants Link Bipolar Disorder with Anxiety Disorders to CREB-Regulated Intracellular Signaling Pathways. Frontiers in psychiatry 33 24348429
2022 Differential requirements of IQUB for the assembly of radial spoke 1 and the motility of mouse cilia and flagella. Cell reports 25 36417862
2018 Upregulated IQUB promotes cell proliferation and migration via activating Akt/GSK3β/β-catenin signaling pathway in breast cancer. Cancer medicine 20 29968965
2022 Combining bioinformatics, network pharmacology and artificial intelligence to predict the mechanism of celastrol in the treatment of type 2 diabetes. Frontiers in endocrinology 18 36339449
2023 IQUB deficiency causes male infertility by affecting the activity of p-ERK1/2/RSPH3. Human reproduction (Oxford, England) 8 36355624
2025 IQUB mutation induces radial spoke 1 deficiency causing asthenozoospermia with normal sperm morphology in humans and mice. Cell communication and signaling : CCS 5 39849482
2024 Mechanisms underlying morphological and functional changes of cilia in fibroblasts derived from patients bearing ARL3T31A and ARL3T31A/C118F mutations. FASEB journal : official publication of the Federation of American Societies for Experimental Biology 5 38457249
2023 Transcriptome-wide profile of 1α,25 dihydroxyvitamin D3 in HTR-8/SVneo cells. The journal of obstetrics and gynaecology research 1 37277920
2026 IQ motif family genes in male infertility: pathogenesis, mechanisms, and clinical perspectives. Frontiers in reproductive health 0 41602861
2023 [Preparation and application of rabbit polyclonal antibody against mouse IQ and ubiquitin-like domain-containing protein (IQUB)]. Xi bao yu fen zi mian yi xue za zhi = Chinese journal of cellular and molecular immunology 0 37732581