| 1995 |
Retroviral overexpression of HOXB4 in murine bone marrow cells selectively expands the most primitive hematopoietic stem cell (HSC) compartment, resulting in ~50-fold higher numbers of transplantable totipotent HSCs in primary and secondary recipients, without perturbing lineage differentiation or causing overt pathology. HOXB4 functions as a transcription factor regulating HSC self-renewal and proliferative potential. |
Retroviral gene transfer into murine bone marrow, serial transplantation, limit dilution assay for long-term competitive repopulating cells, in vitro colony assays |
Genes & development |
High |
7622039
|
| 2002 |
HOXB4 expression in primitive yolk-sac or embryonic stem (ES) cell-derived progenitors, combined with culture on hematopoietic stroma, induces a switch to the definitive HSC phenotype capable of long-term multilineage engraftment in lethally irradiated adults, demonstrating HOXB4 confers definitive lymphoid-myeloid engraftment potential on primitive progenitors. |
Retroviral HOXB4 overexpression in ES-cell and yolk-sac progenitors, stromal co-culture, transplantation into lethally irradiated mice, multilineage reconstitution assay in primary and secondary recipients |
Cell |
High |
11955444
|
| 2002 |
HOXB4 overexpression in murine bone marrow enables over 1000-fold higher HSC levels relative to controls and a 40-fold net HSC increase ex vivo, with HSCs retaining full lympho-myeloid repopulating potential, establishing HOXB4 as a potent positive regulator of HSC self-renewal ex vivo. |
Retroviral HOXB4 transduction of murine bone marrow, 10-14 day expansion culture, limit dilution competitive repopulating unit (CRU) assay, transplantation |
Cell |
High |
11955445
|
| 1998 |
Cellular transformation and proliferation induced by HOXB4 (and HOXB3) in Rat-1 fibroblasts requires cooperation with PBX1; the transforming capacity depends on the conserved tetrapeptide (HOX-PBX interaction domain) and the homeodomain (DNA-binding domain). Modulating PBX1 levels directly modulates HOXB4-induced transformation. |
Rat-1 fibroblast transformation assay, overexpression and knockdown of PBX1, HOXB4 point mutants lacking tetrapeptide or homeodomain function |
Oncogene |
High |
9692548
|
| 2003 |
Recombinant TAT-HOXB4 protein (carrying the HIV-TAT protein transduction domain) directly transduces into HSCs and expands murine HSCs ~4–6 fold ex vivo, comparable to retroviral HOXB4, demonstrating that HOXB4 protein itself (not just gene expression) is sufficient to drive HSC expansion and that the protein passively translocates across cell membranes. |
Recombinant protein production, protein transduction into murine bone marrow HSCs, competitive repopulation assay in transplanted mice |
Nature medicine |
High |
14578881 14578882
|
| 2003 |
Human HSCs (LTC-ICs and NOD-SCID repopulating cells) can be expanded >20-fold (LTC-IC) and >2.5-fold (SRC) by HOXB4 protein delivered via stromal cells engineered to secrete it, confirming the membrane-translocating property of the HOXB4 homeoprotein and its ability to expand human HSCs without genetic modification. |
Stromal cells engineered to secrete HOXB4, co-culture with human HSCs, LTC-IC assay, NOD-SCID repopulation assay |
Nature medicine |
High |
14578882
|
| 2003 |
HOXB4-induced HSC expansion in vivo is limited by the availability of PBX1: knockdown of PBX1 in HOXB4-overexpressing HSCs generates 'ultra-competitive' HSCs that are >20-fold more competitive than HOXB4-alone cells, yet still do not exceed normal HSC pool size in vivo, suggesting a non-cell-autonomous mechanism limits expansion. |
Retroviral overexpression of HOXB4 combined with PBX1 shRNA knockdown in murine bone marrow, competitive transplantation, multilineage reconstitution |
Immunity |
High |
12705858
|
| 2004 |
HOXB4-induced HSC expansion requires direct DNA binding by HOXB4: a DNA-binding-incompetent HOXB4 mutant (HOXB4-A) fails to enhance HSC proliferation in vitro or expansion in vivo. Conversely, a mutant lacking HOX-PBX cooperative DNA binding (HOXB4-W→G) retains and even enhances in vitro proliferation and in vivo expansion, demonstrating that HOXB4 acts through direct DNA binding independent of HOX-PBX cooperative interaction. |
Retroviral overexpression of HOXB4 point mutants (DNA-binding-incompetent and PBX-interaction-deficient) in murine bone marrow, in vitro proliferation assay, in vivo competitive repopulation |
Blood |
High |
15226173
|
| 2000 |
HOXB4 transcription in human hematopoietic cells is activated through an E-box binding site (HXRE-2) in its promoter by USF-1 and USF-2 transcription factors acting via the MAP kinase pathway; USF-2 was identified by yeast one-hybrid screen of bone marrow library. MITF binds the same site but does not activate the promoter. |
Promoter deletion/mutation analysis, yeast one-hybrid screen, EMSA, co-transfection luciferase assays in K562 and CD34+ cells, MAP kinase pathway inhibition |
The Journal of experimental medicine |
High |
11085749
|
| 2003 |
The trimeric NF-Y complex binds the HxRE-1 site of the HOXB4 promoter, activates HOXB4 transcription in hematopoietic cells, and physically interacts with USF1/2 on the HOXB4 promoter; NF-Y occupancy on the HOXB4 promoter is reduced during granulocytic differentiation as NF-Ya levels decline, suggesting NF-Y is a developmentally regulated inducer of HOXB4. |
Promoter analysis, EMSA, ChIP assay, co-transfection with dominant-negative NF-Y subunits, co-immunoprecipitation of NF-Y/USF1/2 complex |
Blood |
High |
12791656
|
| 1998 |
Hoxb4 rhombomeric expression in the vertebrate hindbrain is initiated by transient signaling from paraxial mesoderm (somites) through a retinoid pathway requiring retinoic acid receptor (RAR) function within the neural plate; a retinoic acid response element (RARE) within a prerhombomeric enhancer of Hoxb4 is essential for this neural response and interprets positional information for setting the anterior boundary of expression. |
Chick/mouse embryo tissue transposition, RAR inhibition in neural plate, enhancer-reporter transgenic mice, mutagenesis of RA response element |
Neuron |
High |
9697850
|
| 1995 |
Compound mutants for paralogous group 4 Hox genes (hoxa-4, hoxb-4, hoxd-4) show more complete and dose-dependent homeotic transformations of cervical vertebrae than single mutants, demonstrating functional redundancy among paralogous genes and revealing a larger anteroposterior domain of requirement than single mutants indicate. |
Targeted gene disruption in mice (gene targeting), generation of double and triple Hox group 4 compound mutants, skeletal phenotype analysis |
Genes & development |
High |
7628700
|
| 1999 |
HOXB4-overexpressing HSCs regenerate to fully reconstitute the HSC compartment post-transplantation (14-fold more HSCs than control transplants) but do not expand above normal HSC levels found in unmanipulated mice, indicating that HOXB4 overexpression does not override homeostatic mechanisms controlling HSC pool size. |
Murine bone marrow transplantation with HOXB4-retroviral transduced cells, HSC quantification by competitive repopulation over 12 months |
Blood |
High |
10515864
|
| 2003 |
Hematopoietic expression of HOXB4 is regulated by thrombopoietin (TPO) via the p38 MAP kinase pathway, which induces upstream stimulating factor-1 (USF-1), which in turn activates HOXB4 transcription; TPO-null mice have 2–5-fold lower Hoxb4 expression in candidate HSCs. |
TPO stimulation of primitive hematopoietic cell lines, p38 MAPK pharmacological inhibition, comparison of tpo-/- and control mouse HSC Hoxb4 mRNA levels, USF-1 activation assays |
Blood |
Medium |
12855555
|
| 2009 |
Cytoplasmic Prep1 interacts with 4EHP (eukaryotic translation initiation factor 4E homolog protein) in mouse oocytes and together they repress translation of Hoxb4 mRNA by Prep1 binding to the Hoxb4 3'UTR; a functional 4EHP-binding motif in Prep1 is required for this repression. Hoxb4 is overproduced in hypomorphic Prep1 oocytes, establishing Prep1-4EHP as a translational repressor of Hoxb4. |
Confocal microscopy/co-localization, co-immunoprecipitation, pulldown, site-directed mutagenesis of 4EHP-binding motif, in vitro translation assay with luciferase-Hoxb4-3'UTR reporter, RNA EMSA, immunohistochemistry in Prep1 hypomorphic mice |
PloS one |
High |
19365557
|
| 2003 |
Multiple regulatory elements control Hoxb4 mesodermal expression: an intronic enhancer (region C) is sufficient for temporal activation and setting the anterior somitic boundary (somite 6/7), but the Hoxb4 promoter is required to maintain expression beyond E8.5; sequences in the 3'UTR (region B) are necessary specifically to maintain expression in somite 7 from E9.0 onward. Post-transcriptional regulation including transcript stability and selective protein translation/degradation also restricts the Hoxb4 expression domain. |
Transgenic mouse reporter analysis with defined regulatory element deletions, in situ hybridization, developmental time-course analysis |
Development (Cambridge, England) |
Medium |
12736215
|
| 2002 |
An intron enhancer of mouse Hoxb4 requires binding by NFY (at an NFY/YY1 overlapping motif) for its activity in establishing the anterior boundary of mesodermal expression; specific mutations abolishing NFY binding eliminate enhancer activity. The same NFY/YY1 motif is present in the Hoxb4 promoter, suggesting relative NFY vs YY1 occupancy as a mechanism for balancing activation and repression. |
Heterologous promoter-reporter assays, site-directed mutagenesis of NFY and YY1 binding sites, transgenic mouse assay for anterior boundary of mesodermal expression |
Development (Cambridge, England) |
Medium |
12135926
|
| 1994 |
The Hoxb-4 promoter contains multiple positive and negative regulatory elements: two cell-type-specific negative regulatory elements (regions a and d), an additional negative element (region b), and a positive element binding a novel factor HoxTF at sequence GCCATTGG that is essential for efficient Hoxb-4 expression; two 12-bp initiator elements flank each of the two transcription start sites (P1 and P2). |
Nuclease S1 and primer extension mapping of transcription start sites, detailed promoter mutagenesis with CAT reporter assays in multiple cell lines |
Molecular and cellular biology |
Medium |
7969151
|
| 1999 |
HOXB4 is identified as a 1,25-dihydroxyvitamin D3-inducible protein that binds to the MIE1 site in c-myc intron 1 and participates in blocking c-myc transcriptional elongation during HL-60 monocytic differentiation; the MIE1 and MIE2/MIE3 sites are required for D3-mediated suppression of c-myc, and this binding activity requires PKCβ signaling. |
CAT reporter assays with c-myc promoter constructs containing deletions/mutations of MIE sites, gel-shift/EMSA, protein identification of MIE1-binding protein as HOXB4, PKCβ antisense and pharmacological inhibition |
The Journal of biological chemistry |
Medium |
10085075
|
| 2001 |
Antisense knockdown of HOXB4 partially blocks 1,25-dihydroxyvitamin D3-mediated suppression of c-myc and inhibits HL-60 differentiation, establishing that endogenous HOXB4 is functionally required downstream of vitamin D3 signaling to suppress c-myc transcription elongation. |
Phosphorothioate antisense oligonucleotide knockdown of HOXB4, c-myc protein level measurement, HL-60 differentiation assays (NBT and non-specific esterase) |
The Journal of endocrinology |
Medium |
11250656
|
| 2010 |
Hemogen (Hemgn), a hematopoietic-specific nuclear protein, is a direct transcriptional target of HOXB4: HOXB4 binds to the Hemgn promoter region both ex vivo and in vivo (ChIP). Overexpression of Hemgn partially recapitulates HOXB4-mediated myeloid progenitor expansion, and shRNA knockdown of Hemgn reduces HOXB4-mediated expansion. |
Tamoxifen-inducible HOXB4-ER(T2) system in lineage-negative murine bone marrow, expression microarrays, ChIP assay for HOXB4 binding to Hemgn promoter, Hemgn overexpression and shRNA knockdown with myeloid colony assays |
Blood |
High |
20393131
|
| 2013 |
CUL4 ubiquitin ligase mediates post-translational degradation of HOXB4 protein through a conserved degradation signal sequence (degron) in the homeodomain, giving HOXB4 a short protein half-life (~1 hour). A CUL4-resistant (degradation-resistant) HOXB4 mutant has enhanced activity in expanding myeloid progenitors and better maintains human HSCs in a primitive state in vitro and in vivo. This degron is conserved in additional HOX paralogues. |
Co-immunoprecipitation of HOXB4 with CUL4, degron mapping by deletion mutagenesis, protein stability assays, engineered degradation-resistant HOXB4 variants, human HSC transduction and NOD/SCID/IL2Rγ-null mouse transplantation |
Blood |
High |
23520338
|
| 2010 |
Hoxb4 transduction reduces accumulated Geminin protein in hematopoietic stem and progenitor cells through constituting an E3 ubiquitin ligase complex (RDCOXB4) with Roc1-Ddb1-Cul4a, targeting Geminin for ubiquitin-proteasome degradation; Geminin knockdown promotes clonogenic/replating activity while Geminin overexpression suppresses HOXB4-mediated HSC expansion. |
Co-immunoprecipitation of HOXB4 with Roc1-Ddb1-Cul4a complex in vitro and in vivo, ubiquitination assays, Geminin overexpression and knockdown, competitive repopulation in Rae28-deficient mice |
Proceedings of the National Academy of Sciences of the United States of America |
Medium |
21098278
|
| 2013 |
USF1 directs recruitment of the hSET1A histone H3K4 methyltransferase complex to the HoxB4 promoter, establishing H3K4me3 marks and activating HoxB4 transcription during ESC differentiation toward hematopoietic lineages; disruption of USF1 or hSET1A function reduces HoxB4 expression and impairs mesoderm/hematopoietic differentiation. |
ChIP for H3K4me3 and USF1/hSET1A at HoxB4 promoter, dominant-negative USF1 overexpression, RNA interference knockdown of hSET1A, ESC differentiation assays |
PLoS genetics |
Medium |
23754954
|
| 2003 |
The TALE homeodomain gene Irx5 is a direct, positively regulated transcriptional target of Hoxb4 in the developing chick embryo. |
Gain- and loss-of-function manipulation of Hoxb4 in chick embryos with direct readout of Irx5 expression |
Developmental dynamics |
Low |
12701098
|
| 2004 |
Hoxb4 directly induces expression of FLASH (a component of the FAS-CASPASE8 apoptotic pathway) in the notochord after neurulation; blocking FLASH activity or Hoxb4 activity prevents apoptosis in the notochord. |
Gain- and loss-of-function manipulations of Hoxb4 and FLASH in developing embryos (chick), direct readout of FLASH expression and notochord apoptosis |
Developmental biology |
Low |
14697356
|
| 2004 |
Mice homozygous for Hoxb4 deficiency exhibit mildly reduced hematopoietic organ cellularity and impaired proliferative responses of Lin-Sca1+c-kit+ bone marrow stem/progenitor cells in vitro and in vivo after transplantation, with altered expression of other Hox genes and cell cycle regulators. Hoxb4 is not required for HSC generation or steady-state hematopoiesis. |
Hoxb4 complete knockout mouse model, flow cytometry, competitive transplantation, in vitro culture proliferation, quantitative mRNA analysis, cell cycle assays |
Blood |
High |
14962901
|
| 2003 |
Hoxb3/Hoxb4 double-deficient mice have reduced hematopoietic stem cell pool in fetal liver and impaired proliferative capacity of Lin-Sca1+c-kit+ progenitors in vitro and in vivo; slower cell cycle kinetics confer increased tolerance to anti-mitotic drugs, establishing a direct physiological role for Hoxb4 (with Hoxb3) in regulating stem cell proliferation and regeneration. |
Hoxb3/Hoxb4 compound knockout mice, competitive repopulation assay, homing assay, cytostatic drug challenge, flow cytometry, colony assays |
Molecular and cellular biology |
High |
12748289
|
| 2007 |
HOXB4 activity protects adult HSCs from the detrimental anti-proliferative effects of TNF-α; FGF signaling interacts with HOXB4 activity in a context-dependent manner (FGF receptor inhibition enhances HOXB4-mediated expansion of adult and ES-derived HSCs, while FGF2 has a dominant-negative effect on the earliest hematopoietic cells). These findings establish that HOXB4 modulates HSC responses to extrinsic signals. |
Gene expression profiling of inducible HOXB4 in enriched adult HSCs and embryonic derivatives, functional assays with TNF-α treatment and FGF receptor inhibition, competitive repopulation |
Proceedings of the National Academy of Sciences of the United States of America |
Medium |
17940039
|
| 2011 |
Genome-wide ChIP and expression profiling in ES-cell-derived HSPCs identifies Runx1, Scl/Tal1, Gata2, and Gfi1 as direct transcriptional targets of HoxB4, and reveals indirect regulation of Lmo2, Erg, Meis1, Pbx1, Nov, AhR, and Hemgn. HoxB4 acts predominantly as a transcriptional activator but context-dependently represses a significant subset of direct targets. |
ChIP-seq (ChIP coupled with deep sequencing) and genome-wide expression profiling in ES-derived hematopoietic stem/progenitor cells expressing inducible HoxB4 |
Blood |
Medium |
21343615
|
| 2012 |
Dynamic ChIP-seq and gene expression profiling across four stages of HoxB4-mediated ESC differentiation toward HSCs reveals that the HoxB4 regulatory network expands progressively, HoxB4 co-regulates multiple hematopoietic transcription factors (Fli1, Meis1, Runx1, Scl) in distinct combinations, and down-regulation of mitochondrial and lysosomal genes by HoxB4 may contribute to impaired lymphoid development. |
ChIP coupled with deep sequencing and global gene expression profiling at 4 differentiation stages, joint bioinformatic analysis |
Blood |
Medium |
22438249
|
| 2014 |
Prdm16 mRNA is markedly repressed as a direct component of the HOXB4 transcriptional program in transplanted HSCs; enforced co-expression of sPrdm16 with HOXB4 leads to enhanced self-renewal, myeloid expansion, and leukemia, establishing Prdm16 downregulation as a specific mechanism by which HOXB4-expanding HSCs avoid leukemic transformation. |
Time-course gene expression profiling of Lin-Sca1+c-kit+ cells from HOXB4-transplanted mice, co-overexpression of sPrdm16 with HOXB4 by retroviral transduction, murine transplantation leukemia model |
Blood |
Medium |
25082879
|
| 2014 |
HoxB4 and STAT3 act in the same pathway for HSC self-renewal: simultaneous transduction of both does not produce additive effects; inhibition of STAT3 in HoxB4-overexpressing cells abrogates HoxB4 enhancement; HoxB4 upregulation causes ligand-independent Tyr-phosphorylation of STAT3; and the two transcription factors regulate significantly overlapping transcriptomes including pluripotency-related genes Oct-4 and Nanog. |
Retroviral co-transduction of STAT3-C and HoxB4, competitive repopulation assay, STAT3 pharmacological inhibition, phospho-STAT3 Western blot, microarray transcriptome analysis, gene set enrichment analysis |
Stem cells (Dayton, Ohio) |
Medium |
24446131
|
| 2013 |
miR-23a directly binds the 3'UTR of HOXB4 mRNA and represses HOXB4 protein expression by ~65%, as demonstrated by luciferase reporter assay and Western blot. |
Luciferase 3'UTR reporter assay with miR-23a, Western blot for HOXB4 protein after miR-23a transfection |
Genes, chromosomes & cancer |
Medium |
23630040
|
| 2016 |
A proline-rich sequence near the N-terminus of HOXB4, unique among HOX proteins and highly conserved in higher mammals, is required for controlled stem cell amplification: deletion of this domain substantially enhances HOXB4's oncogenicity causing acute leukemia in mice; insertion of the domain into HOXA9 impairs HOXA9's leukemogenicity. |
Domain deletion and domain-swap mutagenesis of HOXB4/HOXA9, retroviral transduction into murine bone marrow, transplantation with leukemia monitoring, in vivo stem cell expansion assays |
Blood |
High |
27827825
|
| 2019 |
IGF2BP1 maintains HOXB4 mRNA stability in leukemia cells; IGF2BP1 inhibition reduces HOXB4 expression and decreases leukemia cell tumorigenicity, myeloid differentiation block, and chemotherapy resistance. |
CLIP and PAR-CLIP to identify HOXB4 as an IGF2BP1 RNA target, gain- and loss-of-function systems for IGF2BP1 in leukemia cell lines, tumor-initiating potential assays |
Leukemia |
Medium |
31768017
|
| 2021 |
HOXB4 directly transcriptionally represses β-catenin expression, thereby inactivating the Wnt/β-catenin signaling pathway in cervical cancer cells; re-expression of β-catenin rescues HOXB4-induced growth inhibition. |
ChIP or reporter assays for HOXB4 binding to β-catenin promoter, gain/loss-of-function of HOXB4 in cervical cancer cells, β-catenin rescue experiment, nude mouse xenograft |
Cell death & disease |
Medium |
33479226
|
| 2020 |
HOXB4 activates DHDDS transcription by binding to two DNA motifs in the DHDDS gene, contributing to ovarian cancer proliferation and invasion; HOXB4 also induces Snail and Zeb1 expression (EMT markers). |
ChIP assay for HOXB4 binding to DHDDS promoter motifs, HOXB4 gain/loss-of-function in ovarian cancer cells, xenograft mouse model |
BMC cancer |
Medium |
32178630
|
| 2024 |
HOXB4 binds to the LINC00629 promoter and transcriptionally represses LINC00629 expression in ovarian cancer cells. |
ChIP assay for HOXB4 binding to the LINC00629 promoter, correlation of HOXB4 expression with LINC00629 levels |
Cancer science |
Low |
38182548
|
| 2021 |
HOXB4 serves as a transcriptional activator of AKR1C3 and can suppress erastin-induced ferroptosis in H9C2 cardiomyocytes. |
Luciferase reporter assay for HOXB4 transactivation of AKR1C3, ferroptosis characteristic measurements (GPX4, MDA, iron, GSH) in HOXB4-transfected H9C2 cells |
Frontiers in cardiovascular medicine |
Low |
34568444
|
| 2018 |
HOXB4 promotes hemogenic endothelium formation from differentiating mouse ESCs without altering endothelial cell development; whole-transcriptome analysis shows HOXB4 upregulates core hematopoietic transcription factors at the hemogenic endothelium stage, with blood progenitor formation requiring subsequent Runx1 expression. |
Retroviral HOXB4 expression in Runx1-/- ESCs with doxycycline-inducible Runx1, flow cytometric identification of hemogenic endothelium, whole-transcriptome analysis |
Stem cell reports |
Medium |
29456178
|
| 2008 |
HOXB4 overexpression in large animals (dogs, macaques) caused myeloid leukemia ~2 years post-transplantation with dysregulated oncogene expression and a block in myeloid differentiation; HOXB4 knockdown in leukemic cells restored differentiation, suggesting direct HOXB4 involvement. Control gammaretroviral vectors (expressing MGMT or no transgene) did not cause leukemia. |
Retroviral HOXB4 transduction in large animal HSCs (dog, macaque), long-term transplantation monitoring, leukemia characterization (blast immunophenotyping, oncogene expression profiling), HOXB4 shRNA knockdown of leukemic cells |
The Journal of clinical investigation |
Medium |
18357342
|