Affinage

GPI

Glucose-6-phosphate isomerase · UniProt P06744

Length
558 aa
Mass
63.1 kDa
Annotated
2026-06-10
100 papers in source corpus 7 papers cited in narrative 7 extracted findings
Cross-family judge vs UniProt: Affinage preferred faithfulness: 6/6 claims corpus-supported (100%)

Mechanistic narrative

Synthesis pass · prose summary of the discoveries below

GPI is a bifunctional protein that operates both as a glycolytic enzyme (glucose-6-phosphate isomerase) and as a secreted cytokine, autocrine motility factor (AMF/PGI), that drives tumor cell migration, invasion, and metastasis (PMID:30053149, PMID:26308071). Its motogenic cytokine activity is mechanistically separable from its catalytic isomerase activity: pharmacological inhibitors reduce extracellular GPI/AMF activity, EMT marker content, and migration without affecting lactate production (PMID:24440856). Secreted GPI/AMF signals through its receptor AMFR/gp78 and acts via the MAPK-ERK1/2 cascade to promote invasion, migration, and proliferation, with hypoxia upregulating both ligand and receptor (PMID:30053149, PMID:26308071). Engagement of AMFR additionally triggers an integrin switch, upregulating β3 and downregulating β1 integrin to confer an invasive phenotype (PMID:12067203). GPI/AMF expression is positioned downstream of HER2/heregulin signaling, being transcriptionally induced by heregulin and suppressed by anti-HER2 trastuzumab (PMID:12374700), while its cytokine and enzymatic functions are both inhibited by IGFBP-3, which binds GPI/AMF at the cell surface and blocks its phosphorylation, membrane translocation, and migration-promoting activity (PMID:15059907). Direct physical interaction with the glycolysis-related protein GPD2 has also been detected (PMID:32292350).

Mechanistic history

Synthesis pass · year-by-year structured walk · 7 steps
  1. 2002 Medium

    Established that GPI/AMF expression is governed by upstream oncogenic signaling, placing the cytokine downstream of the HER2/heregulin axis and rationalizing its co-targeting in breast cancer.

    Evidence RT-PCR, Western blot, AMF promoter-reporter assay, and combination inhibitor treatment in HER2-high breast cancer cells

    PMID:12374700

    Open questions at the time
    • Transcription factor mediating heregulin-driven AMF induction not identified
    • Does not address how secreted AMF feeds back on HER2 signaling
  2. 2002 Low

    Linked AMFR activation to a downstream cell-surface consequence — integrin switching — showing how the AMF-receptor axis remodels adhesion toward an invasive phenotype rather than driving proliferation.

    Evidence AMF stimulation with flow cytometry for β1/β3 integrins and in vivo spontaneous metastasis models in melanoma cells

    PMID:12067203

    Open questions at the time
    • Integrin switching shown by flow cytometry only; signaling intermediates between AMFR and integrin regulation not defined
    • No direct demonstration that integrin switch is required for metastasis
  3. 2004 Medium

    Identified IGFBP-3 as a physical negative regulator of GPI/AMF, establishing that an extracellular binding protein can simultaneously block both its enzymatic and motogenic activities.

    Evidence Cell-surface cross-linking of biotinylated IGFBP-3, streptavidin pulldown, ligand blotting, isomerase activity assay, and migration assay in breast cancer cells

    PMID:15059907

    Open questions at the time
    • Binding interface and stoichiometry of the IGFBP-3/GPI interaction unresolved
    • Mechanism by which IGFBP-3 reduces AMF phosphorylation not defined
  4. 2014 Medium

    Demonstrated that the motogenic and glycolytic functions of GPI/AMF are mechanistically separable, showing inhibitors can suppress migration and EMT without affecting glycolytic output.

    Evidence Pharmacological inhibition with erythrose-4-phosphate and 6-phosphogluconate, EMT protein quantification, and migration assays in breast cancer tumor spheroids

    PMID:24440856

    Open questions at the time
    • Molecular basis distinguishing cytokine from catalytic activity not structurally defined
    • EMT transcriptional program downstream of AMF not mapped
  5. 2015 Medium

    Placed the cytokine function of GPI/AMF in a defined signaling pathway, showing it drives endometrial carcinoma invasion and metastasis through MAPK-ERK1/2.

    Evidence shRNA knockdown, MEK inhibitor treatment, 3D culture, and mouse metastasis models in endometrial carcinoma

    PMID:26308071

    Open questions at the time
    • Receptor-proximal events coupling AMFR to ERK activation not resolved
    • Does not address tissue-specificity of the proliferation versus invasion balance
  6. 2018 Medium

    Showed hypoxia coordinately upregulates GPI/AMF and AMFR and that secreted GPI/AMF drives invasion while suppressing proliferation, distinguishing its autocrine cytokine role from its metabolic role.

    Evidence shRNA knockdown, ELISA for secreted GPI/AMF, migration assays, and orthotopic glioblastoma xenografts

    PMID:30053149

    Open questions at the time
    • Mechanism of hypoxia-driven secretion not defined
    • Molecular basis of the migration/proliferation trade-off unresolved
  7. 2020 Low

    Identified a direct protein-protein interaction between GPI and the glycolysis-related protein GPD2 and showed small-molecule (esculetin) binding can suppress GPI-dependent glycolysis.

    Evidence Microscale thermophoresis binding assays, glycolysis rate measurement, and tumor models in HepG2 cells

    PMID:32292350

    Open questions at the time
    • GPI-GPD2 interaction shown by single binding method without reciprocal validation
    • Functional consequence of GPI-GPD2 binding not established

Open questions

Synthesis pass · forward-looking unresolved questions
  • How the receptor-proximal AMFR signaling complex couples to ERK and integrin remodeling, and what structural features separate GPI's cytokine from its enzymatic activity, remain open.
  • No structural model distinguishing the catalytic active site from the motogenic surface
  • AMFR signaling intermediates upstream of ERK and integrin switching not mapped
  • Regulation of GPI/AMF secretion not mechanistically defined

Mechanism profile

Synthesis pass · controlled-vocabulary classification · explore literature graph →
Molecular activity
GO:0016853 isomerase activity 2 GO:0048018 receptor ligand activity 2 GO:0060089 molecular transducer activity 2
Localization
GO:0005576 extracellular region 2 GO:0005886 plasma membrane 2
Pathway
R-HSA-1430728 Metabolism 2 R-HSA-162582 Signal Transduction 2 R-HSA-1643685 Disease 2

Evidence

Reading pass · 7 per-paper findings extracted from the source corpus
Year Finding Method Journal Conf PMIDs
2004 Insulin-like growth factor binding protein-3 (IGFBP-3) physically binds to AMF/PGI (GPI) at the cell membrane of breast cancer cells, as shown by cross-linking of biotinylated IGFBP-3 to intact cells followed by streptavidin pulldown, and by ligand blotting of purified AMF/PGI. Both glycosylated and nonglycosylated IGFBP-3 inhibited the catalytic (isomerase) activity of AMF/PGI in a dose-dependent manner, inhibited AMF/PGI binding to breast cancer cells, and inhibited AMF/PGI-induced cell migration. IGFBP-3 also decreased AMF/PGI phosphorylation and reduced its translocation to the cell membrane. Cell-surface cross-linking with biotinylated IGFBP-3, streptavidin pulldown, ligand blotting, enzymatic activity assay, cell migration assay Cancer research Medium 15059907
2018 GPI/AMF (glucose-6-phosphate isomerase/autocrine motility factor) is secreted by glioblastoma cells in an autocrine fashion to stimulate cell migration via its receptor AMFR. Hypoxia upregulates both GPI/AMF and AMFR expression as well as GPI/AMF secretion. Knockdown or inhibition of GPI/AMF reduced glioblastoma cell migration but in part stimulated proliferation, indicating that the cytokine function of secreted GPI/AMF drives invasion while suppressing proliferation. In a highly invasive orthotopic glioblastoma model, GPI/AMF knockdown reduced tumor cell invasion. shRNA knockdown, in vitro migration assay, orthotopic xenograft model, ELISA for secreted GPI/AMF, receptor expression analysis Neuro-oncology Medium 30053149
2014 Secreted GPI/AMF acts as a cytokine that promotes epithelial-mesenchymal transition (EMT) and invasiveness in breast cancer multicellular tumor spheroids. Addition of GPI/AMF inhibitors (erythrose-4-phosphate or 6-phosphogluconate) at micromolar doses significantly decreased extracellular GPI/AMF activity (>80%), with concomitant reduction in EMT protein content and migratory capacity, without inhibiting lactate production, indicating that the motogenic effect of GPI/AMF is separable from its glycolytic enzymatic function. Pharmacological inhibition with erythrose-4-phosphate and 6-phosphogluconate, cell migration assay, EMT protein quantification, extracellular GPI/AMF activity assay, multicellular tumor spheroid model Biochimica et biophysica acta Medium 24440856
2015 AMF/PGI (GPI) promotes endometrial carcinoma cell invasion, migration, and proliferation through its cytokine (not enzymatic) function, acting via the MAPK-ERK1/2 signaling pathway. shRNA-mediated AMF knockdown inhibited these tumorigenic activities, and MEK inhibitor decreased AMF-induced effects. In mouse tumor metastasis models, AMF-silenced cells showed decreased proliferative and metastatic capacity. shRNA knockdown, MEK inhibitor treatment, 3D culture growth assay, mouse metastasis models (intracardiac and intraperitoneal injection), invasion/migration assays Oncotarget Medium 26308071
2002 Anti-HER2 antibody Herceptin (trastuzumab) downregulates AMF/GPI mRNA and protein expression in high HER2-expressing breast cancer cells, and inhibits transcription from the AMF promoter. HER2 signaling via heregulin (HRG) induces AMF expression, and HCT blocks this induction. Combining HCT with AMF inhibitors (erythrose-4-phosphate or D-mannose-6-phosphate) produced additive inhibitory effects on cell growth and invasiveness, placing GPI/AMF downstream of HER2/heregulin signaling. RT-PCR, Western blot, promoter-reporter assay, cell proliferation and invasion assays, pharmacological combination treatment Clinical cancer research Medium 12374700
2020 Esculetin binds directly to glucose-6-phosphate isomerase (GPI) protein, as demonstrated by microscale thermophoresis (MST). Esculetin inhibited the rate of glycolysis in HepG2 cells, reducing cellular lactate production and glucose consumption. GPD2 was found to bind directly to GPI, revealing a physical interaction between these two glycolysis-related proteins. Microscale thermophoresis (MST) binding assay, glycolysis rate measurement (lactate production, glucose consumption), protein-protein interaction assay, animal tumor models Frontiers in pharmacology Low 32292350
2002 AMF receptor (AMFR/gp78) expression in human melanoma cell lines correlates with in vivo metastatic potential. Activation of the AMF receptor in melanoma cells upregulates β3 integrin while downregulating β1 integrin at the cell surface, inducing an integrin phenotype characteristic of invasive/metastatic melanoma, without a mitogenic response. In vitro AMF stimulation, flow cytometry for integrin expression, in vivo spontaneous metastasis models (immunosuppressed newborn rat, SCID mice), immunohistochemistry Clinical & experimental metastasis Low 12067203

Source papers

Stage 0 corpus · 100 papers · ranked by NIH iCite citations
Year Title Journal Citations PMID
1997 A GPI-linked protein that interacts with Ret to form a candidate neurturin receptor. Nature 344 9192898
2004 Sorting GPI-anchored proteins. Nature reviews. Molecular cell biology 339 15040444
1997 Neurturin responsiveness requires a GPI-linked receptor and the Ret receptor tyrosine kinase. Nature 253 9192899
2020 Biosynthesis and biology of mammalian GPI-anchored proteins. Open biology 242 32156170
2015 Biosynthesis of GPI-anchored proteins: special emphasis on GPI lipid remodeling. Journal of lipid research 217 26563290
2008 Biosynthesis, remodelling and functions of mammalian GPI-anchored proteins: recent progress. Journal of biochemistry 216 18635593
2012 Transient GPI-anchored protein homodimers are units for raft organization and function. Nature chemical biology 214 22820419
2003 Genome-wide identification of fungal GPI proteins. Yeast (Chichester, England) 205 12845604
1993 The tyrosine kinase connection: how GPI-anchored proteins activate T cells. Current opinion in immunology 202 8347297
2002 Glycosylphosphatidylinositol (GPI)-anchored proteins. Biological & pharmaceutical bulletin 200 11995915
2006 Biosynthesis and function of GPI proteins in the yeast Saccharomyces cerevisiae. Biochimica et biophysica acta 191 16859984
2004 Protein oligomerization modulates raft partitioning and apical sorting of GPI-anchored proteins. The Journal of cell biology 191 15557121
2002 Differential sorting and fate of endocytosed GPI-anchored proteins. The EMBO journal 189 12145200
1993 Plasmalemmal caveolae and GPI-anchored membrane proteins. Current opinion in cell biology 172 7504930
2012 GPI-anchor remodeling: potential functions of GPI-anchors in intracellular trafficking and membrane dynamics. Biochimica et biophysica acta 170 22265715
1996 Cell-surface engineering with GPI-anchored proteins. FASEB journal : official publication of the Federation of American Societies for Experimental Biology 168 8621057
1996 Endocytosis of GPI-linked membrane folate receptor-alpha. The Journal of cell biology 163 8567728
2016 Raft-based interactions of gangliosides with a GPI-anchored receptor. Nature chemical biology 151 27043189
2001 The GPI-anchor and protein sorting. Cellular and molecular life sciences : CMLS 148 11814051
2001 The dual functions of GPI-anchored PH-20: hyaluronidase and intracellular signaling. Matrix biology : journal of the International Society for Matrix Biology 144 11731269
1994 Release of GPI-anchored membrane proteins by a cell-associated GPI-specific phospholipase D. The EMBO journal 131 7512501
2000 Intracellular transport of GPI-anchored proteins. The EMBO journal 125 10619839
2000 Gaa1p and gpi8p are components of a glycosylphosphatidylinositol (GPI) transamidase that mediates attachment of GPI to proteins. Molecular biology of the cell 107 10793132
2006 PGAP2 is essential for correct processing and stable expression of GPI-anchored proteins. Molecular biology of the cell 100 16407401
2006 PER1 is required for GPI-phospholipase A2 activity and involved in lipid remodeling of GPI-anchored proteins. Molecular biology of the cell 93 17021251
2007 Lipid remodeling of GPI-anchored proteins and its function. Biochimica et biophysica acta 92 17913366
2000 Signaling of immune system cells by glycosylphosphatidylinositol (GPI) anchor and related structures derived from parasitic protozoa. Current opinion in microbiology 90 10972501
1993 GPI- and transmembrane-anchored influenza hemagglutinin differ in structure and receptor binding activity. The Journal of cell biology 89 8397215
2009 Structural remodeling of GPI anchors during biosynthesis and after attachment to proteins. FEBS letters 83 19883648
2001 GPI-anchored proteins: now you see 'em, now you don't. FASEB journal : official publication of the Federation of American Societies for Experimental Biology 76 11156970
2000 AMF-1/Gps2 binds p300 and enhances its interaction with papillomavirus E2 proteins. Journal of virology 71 10846067
2003 Neural GPI-anchored cell adhesion molecules. Frontiers in bioscience : a journal and virtual library 64 12957835
2015 GPI-AP release in cellular, developmental, and reproductive biology. Journal of lipid research 59 26593072
2008 Different GPI-attachment signals affect the oligomerisation of GPI-anchored proteins and their apical sorting. Journal of cell science 59 19056670
2003 GPI-anchored uPAR requires Endo180 for rapid directional sensing during chemotaxis. The Journal of cell biology 59 12952933
2014 The GPI-anchoring of PrP: implications in sorting and pathogenesis. Prion 55 24509692
1992 Internalization of glycosyl-phosphatidylinositol (GPI)-anchored lymphocyte proteins. II. GPI-anchored and transmembrane molecules internalize through distinct pathways. European journal of immunology 55 1346109
1997 Cell surface dynamics of GPI-anchored proteins. Advances in experimental medicine and biology 54 9193677
2022 Vps13-like proteins provide phosphatidylethanolamine for GPI anchor synthesis in the ER. The Journal of cell biology 53 35015055
2013 GPI transamidase and GPI anchored proteins: oncogenes and biomarkers for cancer. Critical reviews in biochemistry and molecular biology 53 23978072
2008 Profiling the expression pattern of GPI transamidase complex subunits in human cancer. Modern pathology : an official journal of the United States and Canadian Academy of Pathology, Inc 51 18487995
2019 Misfolded GPI-anchored proteins are escorted through the secretory pathway by ER-derived factors. eLife 49 31094677
2016 Glycosylphosphatidylinositol (GPI) Modification Serves as a Primary Plasmodesmal Sorting Signal. Plant physiology 48 27559035
2005 Expression of autocrine motility factor (AMF) and its receptor, AMFR, in human breast cancer. The journal of histochemistry and cytochemistry : official journal of the Histochemistry Society 48 16204225
2014 Human genetic disorders involving glycosylphosphatidylinositol (GPI) anchors and glycosphingolipids (GSL). Journal of inherited metabolic disease 45 25164783
2005 GPI valence and the fate of secretory membrane proteins in African trypanosomes. Journal of cell science 45 16291721
2018 Targeting the GPI biosynthetic pathway. Pathogens and global health 44 29484956
2016 Limited ER quality control for GPI-anchored proteins. The Journal of cell biology 42 27325793
2009 GPI-anchored proteins at the node of Ranvier. FEBS letters 42 19703450
1994 Cellular expression of a GPI-linked T cell activation protein. Cellular immunology 41 8025953
2021 A knockout cell library of GPI biosynthetic genes for functional studies of GPI-anchored proteins. Communications biology 39 34162996
2020 Esculetin Inhibits Cancer Cell Glycolysis by Binding Tumor PGK2, GPD2, and GPI. Frontiers in pharmacology 39 32292350
2013 Recent progress in synthetic and biological studies of GPI anchors and GPI-anchored proteins. Current opinion in chemical biology 39 24128440
2020 Mammalian GPI-anchor modifications and the enzymes involved. Biochemical Society transactions 36 32573677
2016 HSV1 MicroRNA Modulation of GPI Anchoring and Downstream Immune Evasion. Cell reports 36 27760325
2020 Exosomes and GPI-anchored proteins: Judicious pairs for investigating biomarkers from body fluids. Advanced drug delivery reviews 35 32828789
2004 GPI-anchored protein cleavage in the regulation of transmembrane signals. Sub-cellular biochemistry 34 15376625
2020 GPI Anchored Proteins in Aspergillus fumigatus and Cell Wall Morphogenesis. Current topics in microbiology and immunology 33 32418035
2018 Pertussis in Africa: Findings and recommendations of the Global Pertussis Initiative (GPI). Vaccine 33 29602703
2015 Trafficking and Membrane Organization of GPI-Anchored Proteins in Health and Diseases. Current topics in membranes 33 26015286
2006 CHO glycosylation mutants: GPI anchor. Methods in enzymology 32 17113867
2004 GPI-anchored proteins and lipid rafts. The Italian journal of biochemistry 32 15646015
2019 Novel strategy for anchorage position control of GPI-attached proteins in the yeast cell wall using different GPI-anchoring domains. Metabolic engineering 31 31715252
2004 Insulin-like growth factor binding protein-3 interacts with autocrine motility factor/phosphoglucose isomerase (AMF/PGI) and inhibits the AMF/PGI function. Cancer research 31 15059907
2019 Vaccination against babesiosis using recombinant GPI-anchored proteins. International journal for parasitology 30 30684517
2017 Activation of mTOR is involved in anti-β2GPI/β2GPI-induced expression of tissue factor and IL-8 in monocytes. Thrombosis research 28 28734155
2007 Characterizing the interactions between GPI-anchored alkaline phosphatases and membrane domains by AFM. Pflugers Archiv : European journal of physiology 28 18058122
2004 Yeast Kre1p is GPI-anchored and involved in both cell wall assembly and architecture. Microbiology (Reading, England) 27 15470101
2018 The secreted glycolytic enzyme GPI/AMF stimulates glioblastoma cell migration and invasion in an autocrine fashion but can have anti-proliferative effects. Neuro-oncology 26 30053149
2012 Lipid rafts, caveolae and GPI-linked proteins. Advances in experimental medicine and biology 26 22411310
2001 Purification, cloning and characterization of a GPI inositol deacylase from Trypanosoma brucei. The EMBO journal 26 11532956
2023 Accumulated precursors of specific GPI-anchored proteins upregulate GPI biosynthesis with ARV1. The Journal of cell biology 25 36828365
2023 Effects of static magnetic field (SMF) and alternating magnetic field (AMF) assisted freezing on the microstructure and protein properties of channel catfish (Ictalurus punctatus) fillet. Food chemistry 25 37742547
2019 Endoplasmic Reticulum Export of GPI-Anchored Proteins. International journal of molecular sciences 25 31319476
2023 Structures of liganded glycosylphosphatidylinositol transamidase illuminate GPI-AP biogenesis. Nature communications 24 37684232
2019 Relating GPI-Anchored Ly6 Proteins uPAR and CD59 to Viral Infection. Viruses 24 31739586
2014 GPI/AMF inhibition blocks the development of the metastatic phenotype of mature multi-cellular tumor spheroids. Biochimica et biophysica acta 24 24440856
2020 Calnexin mediates the maturation of GPI-anchors through ER retention. The Journal of biological chemistry 23 32967966
2017 Controlling transferrin receptor trafficking with GPI-valence in bloodstream stage African trypanosomes. PLoS pathogens 23 28459879
2015 Both PIGA and PIGL mutations cause GPI-a deficient isolates in the Tk6 cell line. Environmental and molecular mutagenesis 23 25970100
2009 Annexin A2 mediates anti-beta 2 GPI/beta 2 GPI-induced tissue factor expression on monocytes. International journal of molecular medicine 23 19724897
2000 Expression of the AMF/neuroleukin receptor in developing and adult brain cerebellum. Journal of neuroscience research 23 10820431
2020 Diversity of GPI-anchored fungal adhesins. Biological chemistry 22 33035180
2015 Each GPI-anchored protein species forms a specific lipid raft depending on its GPI attachment signal. Glycoconjugate journal 22 25948169
2011 Synthetic glycosylphosphatidylinositol (GPI) anchors: how these complex molecules have been made. Natural product reports 22 21448495
2010 GPI anchoring facilitates propagation and spread of misfolded Sup35 aggregates in mammalian cells. The EMBO journal 22 20057357
2011 Effects of membrane cholesterol depletion and GPI-anchored protein reduction on osteoblastic mechanotransduction. Journal of cellular physiology 21 21660958
2023 Platelet-derived microparticles stimulated by anti-β2GPI/β2GPI complexes induce pyroptosis of endothelial cells in antiphospholipid syndrome. Platelets 20 36550078
2008 Hypoxia induces expression of a GPI-anchorless splice variant of the prion protein. The FEBS journal 20 18445040
1994 Purified GPI-anchored CD4DAF as a receptor for HIV-mediated gene transfer. Human gene therapy 20 7531502
2002 Expression and function of the AMF receptor by human melanoma in experimental and clinical systems. Clinical & experimental metastasis 19 12067203
2002 Antihuman epidermal growth factor receptor 2 antibody herceptin inhibits autocrine motility factor (AMF) expression and potentiates antitumor effects of AMF inhibitors. Clinical cancer research : an official journal of the American Association for Cancer Research 19 12374700
2022 Self-incompatibility requires GPI anchor remodeling by the poppy PGAP1 ortholog HLD1. Current biology : CB 18 35316654
2021 Human SND2 mediates ER targeting of GPI-anchored proteins with low hydrophobic GPI attachment signals. FEBS letters 18 33838053
2007 Alterations of GPI transamidase subunits in head and neck squamous carcinoma. Molecular cancer 18 18028549
2020 Homozygous splice-variants in human ARV1 cause GPI-anchor synthesis deficiency. Molecular genetics and metabolism 17 32165008
2013 Determinants of GPI-PLC localisation to the flagellum and access to GPI-anchored substrates in trypanosomes. PLoS pathogens 17 23990786
2021 AtPGAP1 functions as a GPI inositol-deacylase required for efficient transport of GPI-anchored proteins. Plant physiology 16 34618080
2015 AMF/PGI-mediated tumorigenesis through MAPK-ERK signaling in endometrial carcinoma. Oncotarget 16 26308071
1994 GPI-anchor synthesis. Parasitology today (Personal ed.) 15 15275478

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