Affinage

DNAJC6

Auxilin · UniProt O75061

Length
913 aa
Mass
100.0 kDa
Annotated
2026-06-09
23 papers in source corpus 9 papers cited in narrative 9 extracted findings
Cross-family judge vs UniProt: Affinage preferred faithfulness: 6/6 claims corpus-supported (100%)

Mechanistic narrative

Synthesis pass · prose summary of the discoveries below

DNAJC6 encodes auxilin, a neuronal HSP40 co-chaperone that confers substrate specificity to the ATPase activity of Hsc70 to drive clathrin uncoating during clathrin-mediated endocytosis (CME) at the presynaptic terminal (PMID:22563501). Loss-of-function mutations cause abnormal retention of assembled clathrin on synaptic vesicles and empty cages, impairing synaptic vesicle recycling, while non-neuronal cells are spared because an alternative J-domain partner compensates (PMID:22563501); in patients, GAK is upregulated in CSF as a candidate compensatory response to auxilin loss (PMID:32472658). Auxilin function is integrated with presynaptic phosphoinositide metabolism, as overexpression of the phosphoinositide phosphatase Synaptojanin-1 rescues the membrane phosphatidylinositol lipid alterations, neuronal dysfunction, and neurodegeneration caused by auxilin loss (PMID:36739293). Beyond endocytosis, auxilin deficiency reduces cytosolic clathrin heavy chain and lysosomal number, downregulating lysosomal cathepsin D and impairing macroautophagy, which drives accumulation of pathologic (phospho-Ser129) α-synuclein in the ER and mitochondria, ER stress, mitochondrial depolarization, and apoptotic and neuroinflammatory (NLRP3, RIPK1-RIPK3-MLKL) death cascades in dopaminergic neurons — a cathepsin D axis confirmed causal by rapamycin rescue in a knock-in mouse (PMID:38928416, PMID:41820376). Biallelic DNAJC6 loss-of-function mutations cause early-onset (PARK19) Parkinson's disease, with reduced auxilin protein and disrupted dopamine homeostasis in patients (PMID:26528954, PMID:32472658). DNAJC6 expression in the substantia nigra is controlled transcriptionally by the midbrain factors NURR1 and FOXA2 and its protein stability by LRRK2, and endocytic defects from auxilin loss impair WNT-LMX1A signaling required for midbrain dopamine neuron development (PMID:33597231, PMID:41955024).

Mechanistic history

Synthesis pass · year-by-year structured walk · 9 steps
  1. 2012 Medium

    Established that DNAJC6 encodes auxilin and that its loss disrupts Hsc70-mediated clathrin uncoating specifically in neurons, defining the core molecular defect in CME.

    Evidence Homozygosity mapping, exome sequencing and transferrin uptake assays in patient fibroblasts, with cited auxilin-null mouse data

    PMID:22563501

    Open questions at the time
    • Identity of the compensating non-neuronal J-domain partner not defined here
    • Did not directly link the defect to dopaminergic vulnerability
  2. 2016 Medium

    Confirmed loss-of-function as the pathogenic mechanism by showing biallelic mutations collapse steady-state auxilin protein in early-onset Parkinson's disease.

    Evidence Western blot of patient fibroblasts with cosegregation and exome sequencing across two families

    PMID:26528954

    Open questions at the time
    • Did not establish the downstream neuronal consequences of reduced protein
    • No mechanism linking protein loss to dopamine system
  3. 2020 Medium

    Linked auxilin loss to disrupted dopamine homeostasis in patients and identified GAK CSF upregulation as a candidate compensatory response.

    Evidence CSF neurotransmitter analysis, auxilin/GAK Western blots of fibroblasts and CSF, and DaTScan imaging in a patient cohort

    PMID:32472658

    Open questions at the time
    • GAK compensation inferred from correlation, not direct functional test in human neurons
    • Mechanism connecting CME defect to dopamine reduction not resolved
  4. 2021 Medium

    Connected auxilin endocytic defects to a developmental axis, showing impaired WNT-LMX1A signaling generates vulnerable dopamine neurons with α-synuclein aggregation and organelle dysfunction.

    Evidence CRISPR-edited human ESC-derived midbrain organoids with transcriptomics and WNT-LMX1A pathway validation

    PMID:33597231

    Open questions at the time
    • Mechanistic step from CME defect to WNT-LMX1A attenuation not fully traced
    • Organoid model may not capture mature adult-onset pathology
  5. 2023 High

    Defined a functional relationship between auxilin and Synaptojanin-1 through phosphoinositide metabolism, placing auxilin loss within presynaptic lipid homeostasis.

    Evidence Drosophila knock-in model with lipidomics and genetic rescue by Synaptojanin-1 overexpression

    PMID:36739293

    Open questions at the time
    • Whether auxilin and SYNJ1 physically interact not established
    • Rescue mechanism could be parallel rather than direct epistasis
  6. 2024 High

    Directly confirmed auxilin is required for presynaptic CME and synaptic vesicle recycling in human patient neurons via gene-transfer rescue, and tied loss to midbrain patterning and maturation defects.

    Evidence Patient iPSC-derived midbrain dopaminergic neurons with isogenic controls and lentiviral DNAJC6 rescue of CME assays

    PMID:38242634

    Open questions at the time
    • Did not dissect the lysosomal/autophagy arm of pathology
    • Relationship between neurodevelopmental defect and later neurodegeneration unresolved
  7. 2024 Medium

    Mapped a lysosomal cathepsin D / α-synuclein cascade downstream of auxilin loss, showing reduced clathrin and lysosomes drive ER and mitochondrial α-synuclein pathology and dopaminergic death.

    Evidence shRNA silencing and PARK19 mutant expression in SH-SY5Y neurons with lysosome, cathepsin D, α-synuclein, ER stress and mitochondrial readouts, plus α-synuclein/cathepsin D knockdown rescue

    PMID:38928416

    Open questions at the time
    • Performed in a transformed cell line rather than authentic dopaminergic neurons
    • Single lab without in vivo confirmation at this stage
  8. 2026 High

    Validated the lysosomal-cathepsin D axis in vivo and extended pathology to microglial inflammasome and necroptotic death cascades, with rapamycin rescue establishing causality.

    Evidence PARK19 knock-in mouse (Dnajc6Q787X/Q787X) with rapamycin pharmacological rescue and immunohistochemical/biochemical mechanistic readouts in substantia nigra

    PMID:41820376

    Open questions at the time
    • Order of events between neuronal and microglial pathology not fully resolved
    • Whether rapamycin benefit generalizes beyond cathepsin D restoration unclear
  9. 2026 Medium

    Identified upstream regulation of DNAJC6 by NURR1/FOXA2 (transcription) and LRRK2 (protein stability), and demonstrated that epigenetic restoration in neurons and astrocytes is therapeutically protective.

    Evidence Postmortem tissue, hPSC-derived midbrain cultures, transcriptional and LRRK2 stability assays, astrocyte functional assays, and CRISPRa-AAV9 in vivo gene activation in an α-synuclein PD model

    PMID:41955024

    Open questions at the time
    • Direct molecular mechanism of LRRK2-mediated stability control not detailed
    • NURR1/FOXA2 regulatory claims partly rely on abstract-level reporting

Open questions

Synthesis pass · forward-looking unresolved questions
  • The structural basis of auxilin-Hsc70-clathrin uncoating and the precise step linking presynaptic CME failure to selective dopaminergic lysosomal/α-synuclein pathology remain to be defined.
  • No structural model of the auxilin co-chaperone cycle in the corpus
  • Causal chain from clathrin retention to cathepsin D loss not mechanistically resolved
  • Identity of compensating non-neuronal J-domain partner unconfirmed

Mechanism profile

Synthesis pass · controlled-vocabulary classification · explore literature graph →
Molecular activity
GO:0098772 molecular function regulator activity 1 GO:0140096 catalytic activity, acting on a protein 1
Localization
GO:0005886 plasma membrane 2 GO:0005829 cytosol 1
Pathway
R-HSA-1643685 Disease 2 R-HSA-5653656 Vesicle-mediated transport 2 R-HSA-9612973 Autophagy 2

Evidence

Reading pass · 9 per-paper findings extracted from the source corpus
Year Finding Method Journal Conf PMIDs
2012 DNAJC6 encodes the neuronal HSP40 co-chaperone auxilin, which confers specificity to the ATPase activity of Hsc70 in clathrin uncoating. Loss-of-function mutations in DNAJC6 cause abnormal retention of assembled clathrin on synaptic vesicles and in empty cages, leading to impaired synaptic vesicle recycling and perturbed clathrin-mediated endocytosis in neurons. Non-neuronal cells are unaffected because a different J-domain-containing partner compensates for auxilin in co-chaperoning Hsc70-mediated uncoating activity. Homozygosity mapping, whole exome sequencing, transferrin uptake endocytosis assay in patient fibroblasts, mRNA level analysis; prior auxilin null mouse data cited PloS one Medium 22563501
2016 Homozygous DNAJC6 mutations cause severely decreased steady-state levels of the auxilin protein in patient fibroblasts, confirming loss-of-function as the pathogenic mechanism in early-onset Parkinson's disease. Protein studies (Western blot) in patient-derived fibroblasts, cosegregation analysis, whole-exome sequencing Annals of neurology Medium 26528954
2020 DNAJC6/auxilin deficiency in patients results in disrupted dopamine homeostasis, evidenced by isolated reduction of homovanillic acid in CSF, reduced presynaptic dopaminergic proteins, and significantly reduced auxilin levels in both fibroblasts and CSF. Cyclin G-associated kinase (GAK) levels in CSF were significantly increased, suggesting a compensatory upregulation of GAK upon auxilin loss, consistent with observations in the auxilin knockout mouse. CSF neurotransmitter analysis, Western blot of patient fibroblasts and CSF for auxilin and GAK, DaTScan (123I-FP-CIT SPECT), whole-exome sequencing Movement disorders : official journal of the Movement Disorder Society Medium 32472658
2021 DNAJC6 mutations in human midbrain-like organoids cause degeneration of midbrain-type dopamine neurons, pathologic α-synuclein aggregation, increased intrinsic neuronal firing frequency, and mitochondrial and lysosomal dysfunctions. Mechanistically, DNAJC6-mediated endocytosis defects impair the WNT-LMX1A signaling pathway during midbrain dopamine neuron development, and reduced LMX1A expression generates vulnerable neurons with pathologic manifestations. CRISPR-Cas9 gene editing of human embryonic stem cells, human midbrain-like organoids (hMLOs), transcriptomic analyses, experimental validation of WNT-LMX1A signaling pathway Science advances Medium 33597231
2023 In a Drosophila knock-in model of DNAJC6/Auxilin pathogenic mutation, loss of auxilin causes synaptic dysfunction, neurological defects, neurodegeneration, and specific lipid metabolism alterations including reduction of membrane phosphatidylinositol lipid species containing long-chain polyunsaturated fatty acids. Overexpression of Synaptojanin-1 (SYNJ1), which binds and metabolizes phosphoinositides, rescues the DNAJC6/Auxilin lipid alterations, neuronal function defects, and neurodegeneration, establishing a functional relationship between auxilin and SYNJ1 through phosphoinositide metabolism. Drosophila knock-in model, lipidomics, genetic rescue by Synaptojanin-1 overexpression, neurological/behavioral assays, neurodegeneration readouts NPJ Parkinson's disease High 36739293
2024 In iPSC-derived midbrain dopaminergic neurons from DNAJC6 loss-of-function patients, auxilin deficiency disturbs synaptic vesicle recycling and homeostasis, and causes neurodevelopmental dysregulation affecting ventral midbrain patterning and neuronal maturation. Lentiviral DNAJC6 gene transfer restored auxilin expression and rescued clathrin-mediated endocytosis, directly confirming that auxilin is required for CME at the presynaptic terminal. iPSC generation from patients, CRISPR-corrected isogenic controls, lentiviral gene transfer rescue, functional CME assays, synaptic vesicle recycling assays Brain : a journal of neurology High 38242634
2024 DNAJC6 paucity in differentiated human SH-SY5Y dopaminergic neurons reduces cytosolic clathrin heavy chain levels and lysosomal number, which downregulates lysosomal cathepsin D and impairs macroautophagy, leading to upregulation of pathologic α-synuclein (including phospho-α-synuclein Ser129) in the ER and mitochondria. ER α-synuclein accumulation activates ER stress, the unfolded protein response, and apoptotic signaling; mitochondrial α-synuclein depolarizes mitochondrial membrane potential and increases superoxide. Knockdown of α-synuclein or cathepsin D blocked DNAJC6 deficiency-evoked dopaminergic cell degeneration. PARK19 DNAJC6 mutants (Q789X or R927G) failed to attenuate tunicamycin- or rotenone-induced upregulation of pathologic α-synuclein and apoptotic signaling, unlike WT DNAJC6. shRNA-mediated gene silencing in differentiated SH-SY5Y neurons, lysosome quantification, cathepsin D assay, α-synuclein immunofluorescence, mitochondrial membrane potential measurement, superoxide assay, ER stress markers, mutant protein rescue experiments International journal of molecular sciences Medium 38928416
2026 In a PARK19 knock-in mouse model (Dnajc6Q787X/Q787X), truncated Dnajc6 decreases clathrin heavy chain and lysosomal number in substantia nigra dopaminergic neurons, leading to downregulation of lysosomal cathepsin D and upregulation of α-synuclein and α-synuclein oligomers, ER stress, mitochondrial apoptotic cascades, microglial NLRP3 inflammasome activation, and neuroinflammatory cell death cascades (RIPK1-RIPK3-MLKL). Rapamycin (lysosomal biogenesis activator) precluded cathepsin D downregulation, α-synuclein upregulation, and PARK19 phenotypes, confirming the causal lysosomal-cathepsin D axis. PARK19 knock-in mouse model, rapamycin pharmacological rescue, immunohistochemistry, lysosome/cathepsin D quantification, α-synuclein/oligomer detection, NLRP3 inflammasome markers, death cascade protein analysis NPJ Parkinson's disease High 41820376
2026 DNAJC6 expression in the substantia nigra is regulated transcriptionally by the midbrain-specific factors NURR1 and FOXA2, and protein stability is regulated by LRRK2. In astrocytes, DNAJC6 deficiency impairs phagocytic, autolysosomal, and mitochondrial functions while promoting a proinflammatory phenotype. CRISPRa-AAV9-mediated epigenetic restoration of DNAJC6 in neurons and astrocytes in an α-synuclein-induced mouse PD model alleviated behavioral deficits and neuropathology. Postmortem tissue analysis, hPSC-derived midbrain cultures, mechanistic studies of NURR1/FOXA2 transcriptional regulation, LRRK2-mediated protein stability assays, astrocyte functional assays (phagocytosis, autolysosomal, mitochondrial), CRISPRa-AAV9 in vivo gene activation The Journal of clinical investigation Medium 41955024

Source papers

Stage 0 corpus · 23 papers · ranked by NIH iCite citations
Year Title Journal Citations PMID
2012 A deleterious mutation in DNAJC6 encoding the neuronal-specific clathrin-uncoating co-chaperone auxilin, is associated with juvenile parkinsonism. PloS one 240 22563501
2016 DNAJC6 Mutations Associated With Early-Onset Parkinson's Disease. Annals of neurology 152 26528954
2012 DNAJC6 is responsible for juvenile parkinsonism with phenotypic variability. Parkinsonism & related disorders 142 23211418
2021 Neurodevelopmental defects and neurodegenerative phenotypes in human brain organoids carrying Parkinson's disease-linked DNAJC6 mutations. Science advances 117 33597231
2012 Homozygous deletion of an 80 kb region comprising part of DNAJC6 and LEPR genes on chromosome 1P31.3 is associated with early onset obesity, mental retardation and epilepsy. Molecular genetics and metabolism 38 22647716
2020 DNAJC6 Mutations Disrupt Dopamine Homeostasis in Juvenile Parkinsonism-Dystonia. Movement disorders : official journal of the Movement Disorder Society 33 32472658
2014 DNAJC6 promotes hepatocellular carcinoma progression through induction of epithelial-mesenchymal transition. Biochemical and biophysical research communications 27 25446072
2023 Parkinsonism mutations in DNAJC6 cause lipid defects and neurodegeneration that are rescued by Synj1. NPJ Parkinson's disease 18 36739293
2024 Neurodevelopmental and synaptic defects in DNAJC6 parkinsonism, amenable to gene therapy. Brain : a journal of neurology 17 38242634
2021 DNAJC6 mutation causing cranial-onset dystonia with tremor dominant levodopa non-responsive parkinsonism: A novel phenotype. Parkinsonism & related disorders 10 34175496
2020 Levodopa responsive-generalized dystonic spells and moaning in DNAJC6 related Juvenile Parkinson's disease. Parkinsonism & related disorders 10 33181391
2024 Downregulation of Protease Cathepsin D and Upregulation of Pathologic α-Synuclein Mediate Paucity of DNAJC6-Induced Degeneration of Dopaminergic Neurons. International journal of molecular sciences 8 38928416
2022 RMR-Related DNAJC6 Expression Suppresses Adipogenesis in 3T3-L1 Cells. Cells 8 35456010
2016 DNAJC6 mutations are not common causes of early onset Parkinson's disease in Chinese Han population. Neuroscience letters 6 27687717
2023 Gene regulation of RMR-related DNAJC6 on adipogenesis and mitochondria function in 3T3-L1 preadipocytes. Biochemical and biophysical research communications 3 37331165
2025 DNAJC6 in acute kidney injury: A novel target for protecting renal tubular epithelial cells through PGC-1α-mediated mitochondrial homeostasis. Experimental cell research 1 40701388
2026 PARK19 truncation mutant Dnajc6 causes lysosomal deficiency-induced upregulation of pathologic α-synuclein and neurodegeneration of substantia nigra dopaminergic cells in PARK19 knockin mice. NPJ Parkinson's disease 0 41820376
2026 DNAJC6 Parkinson's disease: Endolysosomal dysfunction and emerging roles for oligodendrocytes. NPJ Parkinson's disease 0 41935042
2026 Dysregulation of astrocytic DNAJC6 contributes to sporadic Parkinson's disease pathogenesis. The Journal of clinical investigation 0 41955024
2024 Parkinson's disease-associated shifts between DNA methylation and DNA hydroxymethylation in human brain in PD-related genes, including PARK19 (DNAJC6) and PTPRN2 (IA-2β). Research square 0 39070644
2024 Risk Factors Related to Resting Metabolic Rate-Related DNAJC6 Gene Variation in Children with Overweight/Obesity: 3-Year Panel Study. Nutrients 0 39771044
2023 Derivation of induced pluripotent stem cell SHEHDNi002-A from a 68-year-old Chinese Han Parkinson's disease patient carrying LRRK2 and DNAJC6 mutations. Stem cell research 0 38219303
2019 Haplotype Analysis on the Relationship of the DNAJC6 Gene with Early-Onset Parkinson's Disease Risk in a Chinese Population. Journal of Parkinson's disease 0 30373961

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