Affinage

C1QB

Complement C1q subcomponent subunit B · UniProt P02746

Length
253 aa
Mass
26.7 kDa
Annotated
2026-06-09
19 papers in source corpus 9 papers cited in narrative 10 extracted findings
Cross-family judge vs UniProt: tie faithfulness: 5/5 claims corpus-supported (100%)

Mechanistic narrative

Synthesis pass · prose summary of the discoveries below

C1QB encodes the B-chain of the C1q complement subcomponent and is expressed by microglia/macrophages, identified as the cellular source of brain C1qB expression following injury (PMID:1426121, PMID:7955342). C1qB is required for assembly and secretion of the complete C1q complex: a homozygous non-coding mutation abolishing C1qB mRNA and intracellular protein also reduced C1qA mRNA and produced total loss of C1q production (PMID:25454803). Its transcription is dynamically controlled — induced downstream of excitotoxic neuronal injury (PMID:7870303) and by neuronal COX-2 activity (PMID:11810182), positively regulated by direct TCF7L2 binding to the C1qB promoter (PMID:41534674), and negatively regulated by TGF-β1 in microglia (PMID:11074155). Functionally, C1qB promotes monocyte-to-macrophage differentiation, with knockdown reducing macrophage numbers and alleviating tissue damage in a diabetes model (PMID:36464147), and a TCF7L2→C1qB axis drives microglial activation and synaptic pruning-dependent neuronal injury in epilepsy (PMID:41534674). Loss-of-function C1qB mutations cause complete C1q deficiency with immunodeficiency/SLE-like disease (PMID:25454803).

Mechanistic history

Synthesis pass · year-by-year structured walk · 10 steps
  1. 1992 Medium

    Established which brain cell type produces C1qB, a prerequisite for interpreting its role in CNS injury and inflammation.

    Evidence In situ hybridization with CR3 immunoreactivity in lesioned rat striatum

    PMID:1426121

    Open questions at the time
    • Does not address C1qB function or whether secreted C1q is assembled locally
    • Single injury model in one species
  2. 1994 Medium

    Defined the developmental expression pattern of C1qB and argued against a role in programmed cell death, narrowing its candidate functions during brain development.

    Evidence Northern blot and in situ hybridization across rat brain development

    PMID:7955342

    Open questions at the time
    • Negative correlation does not exclude injury-specific roles
    • No loss-of-function test
  3. 1994 Medium

    Placed C1qB induction causally downstream of excitotoxic neuronal injury, linking its expression to neurodegenerative signaling rather than constitutive baseline.

    Evidence Kainate lesion with barbiturate blockade in vivo plus glutamate-treated hippocampal cultures

    PMID:7870303

    Open questions at the time
    • Upstream inducing signal not molecularly identified
    • Whether C1qB induction is protective or injurious unresolved
  4. 2000 Medium

    Identified TGF-β1 as a negative regulator of microglial C1qB expression, defining a cytokine input controlling C1qB transcription.

    Evidence Intraventricular TGF-β1 infusion in vivo and primary microglia cultures with ISH/immunocytochemistry

    PMID:11074155

    Open questions at the time
    • Direct vs indirect transcriptional mechanism not resolved
    • No promoter-level evidence
  5. 2001 Medium

    Positioned COX-2 activity upstream of C1qB expression, connecting prostaglandin signaling to complement induction in neurons.

    Evidence Neuronal hCOX-2 transgenic mice with COX-2 inhibitor treatment and mRNA quantification

    PMID:11810182

    Open questions at the time
    • Mechanistic intermediary between COX-2 and C1qB transcription unknown
    • Neuronal C1qB expression here contrasts with microglial source
  6. 2013 Low

    Demonstrated that C1qB loss-of-function mutations cause complete C1q deficiency and SLE-like disease, establishing clinical consequence of C1qB loss.

    Evidence Genetic sequencing and clinical complement assays in a patient with complete C1q deficiency

    PMID:24160257

    Open questions at the time
    • No in vitro functional reconstitution of the splicing defect
    • Single case report
  7. 2014 Medium

    Showed that C1qB is mechanistically required for assembly and secretion of the entire C1q complex, not merely a passive subunit.

    Evidence Deep sequencing, western blot, ELISA, hemolytic assay and qPCR of C1q chains in a patient

    PMID:25454803

    Open questions at the time
    • Single patient
    • Structural basis of assembly dependence not defined
  8. 2022 Medium

    Assigned C1qB a functional role in promoting monocyte-to-macrophage differentiation with disease relevance beyond the CNS.

    Evidence siRNA silencing in cultured monocytes and lentiviral knockdown in a rat T1DM model with histological assessment

    PMID:36464147

    Open questions at the time
    • Molecular pathway linking C1qB to differentiation unknown
    • Single lab and model
  9. 2026 Medium

    Established a direct TCF7L2→C1qB transcriptional axis driving microglial activation and synaptic pruning-dependent neuronal injury in epilepsy.

    Evidence ChIP and luciferase reporter assays plus lentiviral Tcf7l2 knockdown in a kainic acid epilepsy mouse model

    PMID:41534674

    Open questions at the time
    • Whether C1q-mediated pruning is the sole effector mechanism not isolated
    • Other promoter regulators not surveyed
  10. 2025 Low

    Provided single-cell resolution confirming microglia-exclusive C1QB expression and upregulation in Alzheimer's disease with sex differences.

    Evidence Single-nucleus RNA sequencing of human hippocampus (preprint)

    Open questions at the time
    • No functional validation of C1qB protein activity
    • Preprint, single study
    • Causal role in AD not tested

Open questions

Synthesis pass · forward-looking unresolved questions
  • How C1q produced by C1qB-expressing microglia mechanistically executes synaptic pruning and whether this is protective or pathogenic across disease contexts remains unresolved.
  • No structural model of how C1qB drives C1q assembly
  • Effector pathway from C1q deposition to neuronal injury not isolated
  • Reconciliation of neuronal vs microglial C1qB expression unresolved

Mechanism profile

Synthesis pass · controlled-vocabulary classification · explore literature graph →
Molecular activity
GO:0005198 structural molecule activity 1
Localization
GO:0005576 extracellular region 1
Pathway
R-HSA-168256 Immune System 2
Partners
Complex memberships
C1q complex

Evidence

Reading pass · 10 per-paper findings extracted from the source corpus
Year Finding Method Journal Conf PMIDs
1992 C1qB mRNA in lesioned rat striatum was colocalized to cells immunoreactive for CR3, identifying microglia-macrophages as the cellular source of C1qB expression in the brain following cortical deafferentation. In situ hybridization combined with immunoreactivity for CR3 (complement receptor on microglia-macrophages) Experimental neurology Medium 1426121
1994 C1qB mRNA is expressed in microglia/macrophages (not in neurogenic ventricular or sub-ventricular zones) during rat brain development from embryonic day 14 onward, and its widespread distribution does not correlate anatomically with apoptotic profiles, arguing against a role for C1q in programmed cell death during brain development. Northern blot and in situ hybridization during rat brain development Brain research. Developmental brain research Medium 7955342
1994 Elevations of C1qB mRNA after kainate-induced neuronal injury in vivo were blocked by barbiturates that prevented seizures and neurodegeneration, and a subpopulation of cultured hippocampal neurons that survived glutamate toxicity in vitro also showed parallel elevations of C1qB mRNA, placing C1qB induction downstream of excitotoxic neuronal injury. In vivo kainate lesion model with barbiturate blockade; primary hippocampal neuronal cultures treated with glutamate Neuroscience Medium 7870303
2000 TGF-β1 decreases C1qB mRNA levels in rat cortex, hippocampus, and cultured glia, establishing TGF-β1 as a negative regulator of C1qB expression in microglia; microglia were identified as the main cell type containing TGF-β1 and its receptors after entorhinal cortex lesion by immunocytochemistry combined with in situ hybridization. Intraventricular infusion of TGF-β1 in vivo; primary microglia cultures; immunocytochemistry combined with in situ hybridization; entorhinal cortex lesion model Neuroscience Medium 11074155
2001 Neuronal overexpression of human COX-2 in transgenic mice selectively induced endogenous C1qB expression in neurons, and treatment with the COX-2 inhibitor nimesulide reduced this hCOX-2-mediated induction of hippocampal C1qB mRNA, placing COX-2 activity upstream of C1qB gene expression in neurons. Transgenic mouse model (neuronal hCOX-2 overexpression); COX-2 inhibitor treatment; mRNA quantification Acta neuropathologica Medium 11810182
2013 A novel homozygous splicing mutation in C1qB (c.187+1G>T) was identified in a Japanese girl with complete C1q deficiency, demonstrating that loss-of-function mutations in C1qB are sufficient to abolish C1q activity and cause immunodeficiency/SLE-like disease. Genetic sequencing (identification of homozygous splice-site mutation); clinical complement assays Pediatric rheumatology online journal Low 24160257
2014 A novel homozygous non-coding mutation in C1qB (two nucleotides before the splice site of exon 2) caused complete absence of C1qB mRNA and intracellular C1qB protein, reduced C1qA mRNA, and total loss of C1q production, demonstrating that C1qB is required for assembly and secretion of the complete C1q complex. Deep sequencing; ELISA and hemolytic assay for C1q; western blot of C1q chains in cell lysates; qPCR of C1qA, C1qB, and C1qC mRNA; in silico splice-site analysis Immunobiology Medium 25454803
2022 Silencing C1qB in cultured monocytes inhibited their differentiation into macrophages and reduced macrophage numbers; in a kainic acid-induced rat model of type 1 diabetes, C1qB knockdown reduced macrophage numbers in pancreatic islets and alleviated β-cell damage, placing C1qB as a functional regulator of monocyte-to-macrophage differentiation. C1qB siRNA silencing in cultured monocytes/lymphocytes; in vivo lentiviral knockdown in a rat T1DM model; cell counting and histological assessment of β-cell damage Pharmacological research Medium 36464147
2026 TCF7L2 directly binds the C1qB promoter and positively regulates C1qB expression; lentiviral knockdown of Tcf7l2 in a kainic acid-induced epilepsy mouse model reversed C1qb overexpression, attenuated microglial activation, and ameliorated neuronal injury, establishing a TCF7L2→C1qB regulatory axis that drives synaptic pruning-dependent neuronal damage in epilepsy. Chromatin immunoprecipitation (ChIP); luciferase reporter assay; lentivirus-mediated Tcf7l2 knockdown in a kainic acid epilepsy mouse model; assessment of microglial activation and neuronal injury Brain research bulletin Medium 41534674
2025 Single-nucleus RNA sequencing of human hippocampus revealed that C1QA/B/C genes are exclusively expressed in microglia (not in other brain cell types), and C1QB expression is upregulated in Alzheimer's disease microglia compared to non-demented controls, with female microglia showing higher baseline C1QA/B/C expression than male microglia. Single-nucleus RNA sequencing (snRNA-seq) of 398,097 nuclei from 48 human hippocampal samples; integrated atlas analysis bioRxiv (preprint)preprint Low

Source papers

Stage 0 corpus · 19 papers · ranked by NIH iCite citations
Year Title Journal Citations PMID
1992 Complement C1qB and C4 mRNAs responses to lesioning in rat brain. Experimental neurology 119 1426121
1994 Selective expression of clusterin (SGP-2) and complement C1qB and C4 during responses to neurotoxins in vivo and in vitro. Neuroscience 83 7870303
2011 Transcriptome profiling of whole blood cells identifies PLEK2 and C1QB in human melanoma. PloS one 40 21698244
2024 Cholesterol efflux from C1QB-expressing macrophages is associated with resistance to chimeric antigen receptor T cell therapy in primary refractory diffuse large B cell lymphoma. Nature communications 35 38890370
2022 Single-cell RNA sequencing highlights the roles of C1QB and NKG7 in the pancreatic islet immune microenvironment in type 1 diabetes mellitus. Pharmacological research 27 36464147
2011 Association of C1QB gene polymorphism with schizophrenia in Armenian population. BMC medical genetics 26 21951915
1994 Expression of complement C1qB and C4 mRNAs during rat brain development. Brain research. Developmental brain research 26 7955342
2001 Induction of the complement component C1qB in brain of transgenic mice with neuronal overexpression of human cyclooxygenase-2. Acta neuropathologica 24 11810182
2000 Transforming growth factor-beta1 induces transforming growth factor-beta1 and transforming growth factor-beta receptor messenger RNAs and reduces complement C1qB messenger RNA in rat brain microglia. Neuroscience 24 11074155
2018 Jun, Gal, Cd74, and C1qb as potential indicator for neuropathic pain. Journal of cellular biochemistry 21 29331040
2013 The identification of a novel splicing mutation in C1qB in a Japanese family with C1q deficiency: a case report. Pediatric rheumatology online journal 17 24160257
2014 Identification of a novel non-coding mutation in C1qB in a Dutch child with C1q deficiency associated with recurrent infections. Immunobiology 14 25454803
2021 IRF4-activated TEX41 promotes the malignant behaviors of melanoma cells by targeting miR-103a-3p/C1QB axis. BMC cancer 11 34915882
2024 Identification of the C1qDC gene family in grass carp (Ctenopharyngodon idellus) and the response of C1qA, C1qB, and C1qC to GCRV infection in vivo and in vitro. Fish & shellfish immunology 3 38447782
2024 Causal relationship between complement C1QB and colorectal cancer: a drug target Mendelian randomization study. Frontiers in genetics 1 39109334
2026 TCF7L2 transcriptionally regulates C1QB to exacerbate synaptic pruning-dependent neuronal injury in the epileptic hippocampus. Brain research bulletin 0 41534674
2026 Differential expression of CD74 and C1QB in jaw versus long bone osteosarcoma: Insights from animal models, public datasets and clinical cohorts. Journal of bone oncology 0 41705027
2026 Severe pulmonary involvement and elevated interferon-stimulated genes expression in two siblings with a novel C1QB pathogenic variant. Journal of human immunity 0 42170328
2025 Identification of a Novel Homozygous C1QB Mutation in an Iranian Girl: Expanding the Clinical Spectrum of C1q Deficiency. International journal of immunogenetics 0 40506420

Missed literature

Know a paper Affinage missed for C1QB? Flag it for the maintainers and the community.

No submissions yet.