Affinage

ACAP2

Arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein 2 · UniProt Q15057

Length
778 aa
Mass
88.0 kDa
Annotated
2026-04-28
15 papers in source corpus 7 papers cited in narrative 7 extracted findings

Mechanistic narrative

Synthesis pass · prose summary of the discoveries below

ACAP2 (centaurin-β2) is an Arf6 GTPase-activating protein that functions as an effector of GTP-bound Rab35, coupling Rab35-dependent membrane recruitment to local Arf6 inactivation at endosomes and phagocytic cups to regulate neurite outgrowth, Fcγ receptor–mediated phagocytosis, and oligodendrocyte differentiation/myelination (PMID:22344257, PMID:22045739, PMID:24600047). Specificity of the Rab35–ACAP2 interaction is determined by two threonine residues in Rab35 switch II (Thr-76, Thr-81) and two asparagine residues in the ACAP2 C-terminal domain (Asn-610, Asn-691), and disruption of this interface abolishes neurite outgrowth (PMID:25694427). ACAP2 also possesses a phosphoinositide-binding–dependent pro-apoptotic function, as its knockdown blocks 5-fluorouracil–induced apoptosis in cancer cells (PMID:25853217). ACAP2 protein levels are regulated by RNF126-mediated ubiquitination and proteasomal degradation, which in ovarian cancer cells reprograms lipid metabolism to promote proliferation and metastasis (PMID:40251363).

Mechanistic history

Synthesis pass · year-by-year structured walk · 7 steps
  1. 2006 Medium

    ACAP2 was identified as a physical interactor of vaccinia virus K1L protein, establishing it as a GAP for ARF6 accessible to viral manipulation, though K1L's host-range function proved independent of this binding.

    Evidence Mutagenesis and co-immunoprecipitation with vaccinia K1L in cell culture

    PMID:16806385

    Open questions at the time
    • Only a single study; no independent confirmation of the K1L–ACAP2 interaction
    • Biological significance of the K1L–ACAP2 interaction remains undefined
    • No endogenous cellular phenotype linked to this interaction
  2. 2011 High

    The upstream activator Rab35 was shown to recruit ACAP2 to phagocytic cups during Fcγ receptor–mediated phagocytosis, establishing the Rab35→ACAP2→Arf6 axis as a regulatory module controlling actin-dependent phagosome formation in macrophages.

    Evidence Live-cell imaging, RNAi knockdown, and expression of GDP/GTP-locked Rab35 mutants in macrophages

    PMID:22045739

    Open questions at the time
    • The precise step at which Arf6 inactivation blocks phagosome closure was not resolved
    • Whether other Rab35 effectors contribute in parallel was not tested
  3. 2012 High

    The same Rab35→ACAP2→Arf6 cascade was extended to neuronal differentiation, showing that NGF-stimulated Rab35 recruits ACAP2 to Arf6-positive endosomes and that ACAP2 GAP activity is required for neurite outgrowth.

    Evidence Knockdown-rescue, live-cell imaging, and GTPase activity assays in PC12 cells

    PMID:22344257

    Open questions at the time
    • Downstream effectors of Arf6 inactivation that drive neurite extension were not identified
    • Whether ACAP2 acts at recycling endosomes versus the plasma membrane was not fully distinguished
  4. 2014 High

    The Rab35/ACAP2 module was shown to negatively regulate oligodendrocyte differentiation and myelination by inactivating Arf6, broadening the pathway's physiological scope to CNS glia.

    Evidence siRNA knockdown epistasis and oligodendrocyte–neuronal co-culture with pharmacological validation

    PMID:24600047

    Open questions at the time
    • In vivo myelination phenotypes in knockout animals were not examined
    • The Arf6 effector(s) controlling morphological differentiation downstream were not identified
  5. 2015 High

    The molecular basis of Rab35–ACAP2 specificity was resolved: Thr-76/Thr-81 in Rab35 switch II and Asn-610/Asn-691 in ACAP2's C-terminal domain are essential for binding, and binding-deficient mutants fail to support neurite outgrowth.

    Evidence Point mutagenesis, co-immunoprecipitation, and knockdown-rescue in PC12 cells

    PMID:25694427

    Open questions at the time
    • No structural model of the Rab35–ACAP2 complex exists
    • Whether post-translational modifications modulate this interface is unknown
  6. 2015 Medium

    A GAP-independent pro-apoptotic role for ACAP2 was revealed: ACAP2 shares phosphoinositide-binding properties with its C. elegans ortholog CNT-1, and its knockdown blocks 5-FU–induced apoptosis, linking ACAP2 to programmed cell death.

    Evidence siRNA knockdown and phosphoinositide-binding assays in human cancer cell lines

    PMID:25853217

    Open questions at the time
    • Single-lab finding; independent replication in other cancer cell types is lacking
    • Whether the pro-apoptotic function requires GAP activity or only phosphoinositide binding is unresolved
    • Mechanism connecting phosphoinositide binding to apoptosis execution is unknown
  7. 2025 Medium

    ACAP2 protein stability was shown to be controlled by RNF126-mediated ubiquitination and proteasomal degradation, and this degradation reprograms lipid metabolism to promote ovarian cancer progression.

    Evidence Co-immunoprecipitation, cycloheximide chase, siRNA knockdown, and in vivo xenograft in ovarian cancer cells

    PMID:40251363

    Open questions at the time
    • The specific ubiquitination sites on ACAP2 were not mapped
    • Mechanism linking ACAP2 loss to lipid metabolic reprogramming is not delineated
    • Whether RNF126-ACAP2 regulation occurs in normal physiology or is cancer-specific is unknown

Open questions

Synthesis pass · forward-looking unresolved questions
  • A high-resolution structural understanding of ACAP2's GAP domain in complex with Arf6 and of the Rab35–ACAP2 interface is lacking, and the in vivo physiological consequences of ACAP2 loss in mammalian development and myelination have not been characterized genetically.
  • No crystal or cryo-EM structure of ACAP2 alone or in complex
  • No conditional or constitutive ACAP2 knockout mouse phenotype reported
  • Relationship between GAP-dependent and GAP-independent (apoptotic) functions is unresolved

Mechanism profile

Synthesis pass · controlled-vocabulary classification · explore literature graph →
Molecular activity
GO:0098772 molecular function regulator activity 3 GO:0008289 lipid binding 1
Localization
GO:0005768 endosome 2 GO:0031410 cytoplasmic vesicle 2
Pathway
R-HSA-5653656 Vesicle-mediated transport 3 R-HSA-168256 Immune System 1 R-HSA-5357801 Programmed Cell Death 1
Partners

Evidence

Reading pass · 7 per-paper findings extracted from the source corpus
Year Finding Method Journal Conf PMIDs
2012 ACAP2 (centaurin-β2) functions as a Rab35 effector and as an Arf6-GTPase-activating protein (GAP) during neurite outgrowth. Rab35 recruits ACAP2 to Arf6-positive endosomes in response to NGF stimulation, and ACAP2's Arf6-GAP activity at these endosomes is required for neurite outgrowth in PC12 cells. Knockdown and rescue experiments, live-cell imaging, co-localization, GTPase activity assays Journal of cell science High 22344257
2011 Rab35 recruits ACAP2 (an ARF6-GAP) to phagocytic cups during FcγR-mediated phagocytosis in macrophages; GTP-Rab35-dependent recruitment of ACAP2 regulates actin-dependent phagosome formation, and overexpression of ACAP2 together with GTP-locked Rab35 synergistically inhibits phagocytosis. Live-cell imaging, RNAi knockdown, expression of GDP/GTP-locked Rab35 mutants, co-expression assays Journal of cell science High 22045739
2014 Rab35 and its effector ACAP2 negatively regulate oligodendrocyte morphological differentiation and myelination by inactivating (switching off) Arf6; knockdown of Rab35 or ACAP2 promotes differentiation and myelination, while Arf6 knockdown inhibits it, placing Rab35/ACAP2 upstream of Arf6 in this pathway. siRNA knockdown, oligodendrocyte-neuronal co-culture, GTPase activity assays, pharmacological inhibition of cytohesin-2 Molecular biology of the cell High 24600047
2015 Two threonine residues (Thr-76 and Thr-81) in the switch II region of Rab35 are required for binding ACAP2, and two asparagine residues (Asn-610 and Asn-691) in ACAP2 are key for specific Rab35 recognition; binding-deficient mutants of either protein fail to support neurite outgrowth in PC12 cells. Deletion and point mutation analyses, co-immunoprecipitation, knockdown-rescue experiments The Journal of biological chemistry High 25694427
2015 Human ACAP2 is a functional homolog of C. elegans CNT-1; ACAP2 has a pro-apoptotic function and shares an identical phosphoinositide-binding pattern with truncated CNT-1 (tCNT-1). Knockdown of ACAP2 blocks apoptosis in cancer cells in response to 5-fluorouracil. siRNA knockdown, apoptosis assay, phosphoinositide-binding assay Cell cycle Medium 25853217
2006 Vaccinia virus K1L protein binds ACAP2 (a GAP for ARF6); however, mutational analysis showed that residues required for VV replication in human or rabbit cells are distinct from the ACAP2-binding site on K1L, indicating K1L's host-range function is independent of its ACAP2 interaction. Mutagenesis, co-immunoprecipitation/binding assays, viral replication assays Virology Medium 16806385
2025 RNF126 (a ubiquitin E3 ligase) ubiquitinates and promotes degradation of ACAP2 protein in ovarian cancer cells; RNF126-mediated ACAP2 degradation reprograms lipid metabolism to promote ovarian cancer proliferation, migration, and metastasis. Co-immunoprecipitation, cycloheximide chase assay, siRNA knockdown, in vivo xenograft model Biochemical genetics Medium 40251363

Source papers

Stage 0 corpus · 15 papers · ranked by NIH iCite citations
Year Title Journal Citations PMID
2012 Rab35 regulates Arf6 activity through centaurin-β2 (ACAP2) during neurite outgrowth. Journal of cell science 124 22344257
1994 Prediction of the coding sequences of unidentified human genes. II. The coding sequences of 40 new genes (KIAA0041-KIAA0080) deduced by analysis of cDNA clones from human cell line KG-1. DNA research : an international journal for rapid publication of reports on genes and genomes 122 7584044
2018 The CircRNA-ACAP2/Hsa-miR-21-5p/ Tiam1 Regulatory Feedback Circuit Affects the Proliferation, Migration, and Invasion of Colon Cancer SW480 Cells. Cellular physiology and biochemistry : international journal of experimental cellular physiology, biochemistry, and pharmacology 113 30212824
2011 Rab35 regulates phagosome formation through recruitment of ACAP2 in macrophages during FcγR-mediated phagocytosis. Journal of cell science 72 22045739
2021 Cancer-associated fibroblasts-derived exosomal miR-3656 promotes the development and progression of esophageal squamous cell carcinoma via the ACAP2/PI3K-AKT signaling pathway. International journal of biological sciences 55 34671193
2006 Vaccinia virus K1L protein supports viral replication in human and rabbit cells through a cell-type-specific set of its ankyrin repeat residues that are distinct from its binding site for ACAP2. Virology 38 16806385
2014 Rab35, acting through ACAP2 switching off Arf6, negatively regulates oligodendrocyte differentiation and myelination. Molecular biology of the cell 37 24600047
2020 CircRNA ACAP2 induces myocardial apoptosis after myocardial infarction by sponging miR-29. Minerva medica 31 32406223
2021 Circ-ACAP2 facilitates the progression of colorectal cancer through mediating miR-143-3p/FZD4 axis. European journal of clinical investigation 28 34085707
2020 CircRNA_ACAP2 Suppresses EMT in Head and Neck Squamous Cell Carcinoma by Targeting the miR-21-5p/STAT3 Signaling Axis. Frontiers in oncology 21 33363013
2021 CircRNA ACAP2 Is Overexpressed in Myocardial Infarction and Promotes the Maturation of miR-532 to Induce the Apoptosis of Cardiomyocyte. Journal of cardiovascular pharmacology 15 34139744
2015 Structure-function analyses of the small GTPase Rab35 and its effector protein centaurin-β2/ACAP2 during neurite outgrowth of PC12 cells. The Journal of biological chemistry 15 25694427
2021 CircRNA-ACAP2 contributes to the invasion, migration, and anti-apoptosis of neuroblastoma cells through targeting the miRNA-143-3p-hexokinase 2 axis. Translational pediatrics 13 35070838
2015 Human ACAP2 is a homolog of C. elegans CNT-1 that promotes apoptosis in cancer cells. Cell cycle (Georgetown, Tex.) 8 25853217
2025 RNF126 Promotes Ovarian Cancer Progression by Reprogramming Lipid Metabolism Through Degradation of ACAP2. Biochemical genetics 1 40251363