| 2001 |
The WldS protective gene encodes an N-terminal fragment of UBE4B fused to NMNAT; the chimeric Wld protein localizes predominantly to the nucleus and confers dose-dependent protection against Wallerian degeneration, with NMNAT enzyme activity (not NAD+ content) increased fourfold, indicating an indirect nuclear mechanism of axon protection. |
Transgenic mouse expression, subcellular fractionation/localization, enzymatic activity assay |
Nature neuroscience |
High |
11770485
|
| 2011 |
UBE4B physically interacts with both p53 and Hdm2, promotes p53 polyubiquitination and proteasomal degradation, inhibits p53-dependent transactivation and apoptosis, functioning as an E3/E4 ubiquitin ligase in the p53 regulatory axis. |
Co-immunoprecipitation, ubiquitination assay, transactivation reporter assay, xenograft tumor model with UBE4B silencing |
Nature medicine |
High |
21317885
|
| 2013 |
UBE4B is recruited to endosomes upon EGFR activation by binding to Hrs (ESCRT-0 component); UBE4B ubiquitinates EGFR and regulates its endosomal sorting and lysosomal degradation, coordinating with the deubiquitinase USP8. |
Co-immunoprecipitation, endosomal fractionation, EGFR degradation assay, siRNA knockdown with functional readout |
The Journal of biological chemistry |
High |
24344129
|
| 2015 |
Loss of UBE4B (orthologue ufd-2 in C. elegans) synergizes with loss of LSD1 (spr-5) to suppress proteotoxic neurodegeneration; in mammalian cells, loss of UBE4B promotes clearance of misfolded proteins via both proteasomal and autophagic pathways, with p53 identified as a downstream transcriptional effector of this quality control pathway. |
C. elegans genetic epistasis (double mutant), mammalian cell knockdown, proteasome/autophagy inhibitor assays |
PLoS biology |
High |
25837623
|
| 2016 |
UBE4B co-immunoprecipitates with phosphorylated p53 at serines 15 and 392; UBE4B promotes degradation of endogenous phospho-p53(S15) and phospho-p53(S392) in response to ionizing radiation, and its affinity for Hdm2 is decreased after DNA damage. |
Co-immunoprecipitation with phospho-specific antibodies, IR-induced p53 degradation assay, transactivation reporter assay |
Oncotarget |
Medium |
26673821
|
| 2020 |
UBE4B interacts with and ubiquitinates the HTLV-1 Tax oncoprotein; UBE4B overexpression enhances Tax-induced NF-κB activation, and UBE4B knockdown/knockout attenuates both K48- and K63-linked polyubiquitination of Tax and impairs NF-κB target gene induction. |
Yeast two-hybrid screen, co-immunoprecipitation, proximity ligation assay, confocal microscopy, shRNA/CRISPR knockout, NF-κB reporter assay |
PLoS pathogens |
High |
33362245
|
| 2020 |
UBE4B binds to Hrs (ESCRT-0) on endosomes and ubiquitinates APP; depletion of UBE4B in neurons inhibits APP ubiquitination and internalization into multivesicular body intraluminal vesicles, resulting in increased endosomal Aβ42 generation and secretion. |
Co-immunoprecipitation, MVB reconstitution in cortical neurons, siRNA knockdown, ELISA for Aβ42 |
Molecular and cellular neurosciences |
High |
32841720
|
| 2021 |
UBE4B (orthologue CG11070 in Drosophila) promotes ubiquitination and autophagy-lysosome-dependent degradation of Tau; in mammalian neuroblastoma cells UBE4B together with STUB1 (CHIP) increases ubiquitination and degradation of both total and phosphorylated Tau; autophagy inhibitors block this degradation. |
Drosophila miRNA screen, overexpression in neuroblastoma cells, ubiquitination assay, autophagy/proteasome inhibitor assays, Tau-BiFC mouse model |
Nature communications |
High |
34078905
|
| 2022 |
UBE4B polyubiquitylates and degrades KLHL22 (an E3 ligase that degrades GATOR1 component DEPDC5); loss of UBE4B causes KLHL22 accumulation and mTOR hyperactivation in neural precursor cells, leading to impaired neurogenesis and seizures; rapamycin rescues neurogenesis defects in Ube4b conditional knockout mice. |
Conditional neural knockout mouse, ubiquitination assay, mTOR activity measurement, genetic rescue (KLHL22 suppression), pharmacological rescue (rapamycin) |
Development (Cambridge, England) |
High |
36440598
|
| 2022 |
UBE4B ubiquitinates PP2A, leading to PP2A degradation and consequent AKT activation; this mechanism promotes lung adenocarcinoma cell proliferation, migration, and glycolysis, effects reversed by PP2A overexpression. |
Co-immunoprecipitation, ubiquitination assay, overexpression/shRNA in LUAD cells and xenograft |
Pathology, research and practice |
Medium |
35220170
|
| 2022 |
SF3B4 interacts with UBE4B (Co-IP); SF3B4 depletion reduces UBE4B levels, which in turn reduces polyubiquitinated p53 levels and causes p53/p21 accumulation and cell cycle arrest in A549 lung cancer cells. |
Co-immunoprecipitation, siRNA double knockdown, Western blot, flow cytometry |
Molecules and cells |
Medium |
35996826
|
| 2023 |
The SWIB/Hdm2 motif of UBE4B is required for p53 binding; the UBE4B U-box domain does not bind p53 but is essential for p53 degradation and acts in a dominant-negative manner to stabilize p53 when expressed alone; a UBE4B peptide spanning the SWIB/Hdm2 motif blocks p53-UBE4B interaction and activates p53-dependent transactivation and growth inhibition. |
Co-immunoprecipitation with domain mutants, transactivation reporter assay, growth inhibition assay, peptide blocking experiment |
Molecular therapy. Nucleic acids |
Medium |
36865087
|
| 2023 |
UBE4B interacts with ITCH E3 ligase via ITCH WW domains; ITCH activation leads to ITCH-UBE4B complex formation and recruitment of Ku70 and c-FLIPL, promoting their Lys48/Lys63-branched polyubiquitination and proteasomal degradation; HDAC inhibition induces Ku70 acetylation, releasing c-FLIPL and Bax and enhancing ITCH-UBE4B-mediated polyubiquitination and apoptosis. |
Co-immunoprecipitation, Western blot, siRNA knockdown, caspase 8 activation assay |
Cell death & disease |
Medium |
37957138
|
| 2024 |
UBE4B interacts with the RNA-binding protein HuR; UBE4B regulates p27 translation via the cap-independent IRES pathway by modulating the interaction between HuR and the p27 5' UTR IRES, thereby suppressing p27 protein levels independently of ubiquitin-mediated degradation. |
Co-immunoprecipitation, RNA pulldown/IRES reporter assay, siRNA knockdown and overexpression, Western blot |
Biochemical and biophysical research communications |
Medium |
38211530
|
| 2025 |
ATR-mediated phosphorylation of UBE4B reduces its binding affinity to p53, causing p53 accumulation after DNA damage; the phosphatase Wip1 dephosphorylates UBE4B to restore its p53-binding and degradation activity; inhibition of Wip1 increases UBE4B phosphorylation and further accumulates p53. |
Co-immunoprecipitation, kinase inhibitor assays, Wip1 inhibition, phosphorylation-mimetic mutants, Western blot |
Cell death discovery |
Medium |
40175346
|
| 2025 |
UBE4B directly binds DHO (dihydroorotic acid) and subsequently ubiquitinates JAK1, activating the NF-κB pathway to promote epithelial-mesenchymal transition in hepatocellular carcinoma cells. |
Metabolomics, binding assay, ubiquitination assay, in vitro and in vivo functional experiments |
Hepatology (Baltimore, Md.) |
Medium |
40073276
|
| 2025 |
UBE4B deletion causes KLHL22 accumulation; accumulated KLHL22 stabilizes JAK2 by reducing LNK expression, leading to JAK2 upregulation and PIM1 induction, which mediates resistance to BET inhibitors in hepatocellular carcinoma. |
siRNA/CRISPR knockdown, Western blot, epistasis rescue experiments |
Biochemical pharmacology |
Medium |
40228637
|
| 2025 |
UBE4B ubiquitinates and degrades FAT4; loss of UBE4B stabilizes FAT4 and activates autophagy in gastric cancer cells, while UBE4B overexpression inhibits autophagy and promotes proliferation, migration, and invasion. |
Co-immunoprecipitation, ubiquitination assay, Western blot, transmission electron microscopy, xenograft model |
Cell death & disease |
Medium |
40701960
|
| 2026 |
UBE4B ubiquitinates NIPSNAP1 under mitochondrial depolarization, enhancing NIPSNAP1 interaction with autophagy adaptors NDP52 and p62/SQSTM1 and promoting lysosome-dependent NIPSNAP1 degradation; this UBE4B-NIPSNAP1 axis mediates Parkin-independent mitophagy in HeLa cells. |
Co-immunoprecipitation, in-cell ubiquitination assay (HEK293T and HeLa), lysosome/proteasome inhibitor assays, interaction assay with autophagy adaptors |
International journal of molecular sciences |
Medium |
41596759
|
| 2026 |
UBE4B ubiquitinates and promotes proteasomal degradation of CCAR2; CCAR2 accumulation upon UBE4B depletion inhibits SIRT1 activity, enhancing p53 acetylation and stability; UBE4B thus suppresses apoptosis via dual pathways: direct p53 ubiquitination and CCAR2 degradation (which indirectly stabilizes p53 via SIRT1). |
Orthogonal ubiquitin transfer screening, co-immunoprecipitation, ubiquitination assay, rescue overexpression, transcriptional profiling |
International journal of molecular sciences |
Medium |
42074320
|
| 2011 |
Two alternative splice isoforms of UBE4B (UFD2a-7 and UFD2a-7/7a) are sequentially expressed during myoblast differentiation and are exclusively expressed in mature striated muscle in vertebrates; the muscle-specific isoform UFD2a-7/7a does not interact with VCP/p97 in yeast two-hybrid assays, unlike the canonical isoform. |
RT-PCR/Western blot during C2C12 differentiation and cardiotoxin-induced regeneration, yeast two-hybrid for VCP/p97 interaction |
PloS one |
Medium |
22174917
|