Affinage

TMX3

Protein disulfide-isomerase TMX3 · UniProt Q96JJ7

Length
454 aa
Mass
51.9 kDa
Annotated
2026-06-10
28 papers in source corpus 10 papers cited in narrative 10 extracted findings
Cross-family judge vs UniProt: Affinage preferred faithfulness: 5/5 claims corpus-supported (100%)

Mechanistic narrative

Synthesis pass · prose summary of the discoveries below

TMX3 is an endoplasmic reticulum-resident type I transmembrane thiol-disulfide oxidoreductase of the PDI family that participates in oxidative protein folding and redox-dependent cellular processes (PMID:15623505). Its ER-luminal region adopts a three thioredoxin-like domain architecture in which a single N-terminal redox-active 'a' domain carries the CGHC active site while the catalytically inactive 'b' domain stabilizes the redox-active domain against denaturation and proteolysis in both oxidation states (PMID:17881353); the luminal domain exhibits oxidase activity in vitro with a redox potential of −0.157 V, comparable to PDI and ERp57, and is anchored to the ER membrane via a C-terminal KKXX-type retrieval signal (PMID:15623505). TMX3 is not engaged by the Ero1α oxidase pathway that re-oxidizes other PDI-family members, distinguishing its route of catalytic-cysteine reoxidation (PMID:20802462). Functionally, its redox-active domain is required for vertebrate eye morphogenesis, since wild-type but not a patient-derived active-site-region missense mutant rescues the microphthalmia-like phenotype of TMX3 knockdown in zebrafish (PMID:20485507). TMX3 also promotes ER-mitochondria communication and constrains mitochondrial and NOX4-derived ROS to sustain NFAT1-driven melanoma proliferation and tumor growth (PMID:31304984), and it acts as an essential cofactor enabling functional heterologous assembly of insect nicotinic acetylcholine receptor heteromers (PMID:32611810).

Mechanistic history

Synthesis pass · year-by-year structured walk · 10 steps
  1. 2004 High

    Established TMX3 as a new ER membrane-anchored PDI-family oxidoreductase, answering what kind of enzyme it is and where it acts.

    Evidence Immunofluorescence, membrane fractionation, CD spectroscopy, in vitro oxidase and redox-potential assays on the recombinant luminal domain

    PMID:15623505

    Open questions at the time
    • In vivo physiological substrates not identified
    • Mechanism of catalytic-cysteine reoxidation unaddressed
  2. 2007 High

    Resolved the luminal domain organization, showing how a redox-inactive thioredoxin-like domain stabilizes the adjacent redox-active domain.

    Evidence Recombinant a/ab/abb' constructs analyzed by NMR/biophysics, chemical denaturation, limited proteolysis, and modeling

    PMID:17881353

    Open questions at the time
    • Role of the b' domain not defined
    • Structural consequences for substrate binding not shown
  3. 2010 Medium

    Determined that TMX3 is not re-oxidized by Ero1α, distinguishing its redox cycling from canonical PDI enzymes.

    Evidence Mixed-disulfide trapping and co-IP in normal and ERO1-deficient cells (negative result for TMX3)

    PMID:20802462

    Open questions at the time
    • The actual oxidant/reductant partner of TMX3 remains unidentified
    • Negative result does not exclude indirect/low-affinity coupling
  4. 2010 High

    Linked TMX3 redox-active function to a developmental phenotype, showing its catalytic domain is required for eye morphogenesis.

    Evidence Zebrafish morpholino knockdown with wild-type vs. patient missense human mRNA rescue and islet-1 retinal labeling

    PMID:20485507

    Open questions at the time
    • Substrates relevant to eye development unknown
    • Causal role of the human variant in disease not established by family genetics here
  5. 2009 Medium

    Defined TMX3 surface behavior in platelets, distinguishing it from activation-mobilized thiol isomerases.

    Evidence Flow cytometry, cell-surface biotinylation, immunoblot, and gene array in platelets/megakaryocytes

    PMID:19995400

    Open questions at the time
    • Functional role of surface TMX3 on platelets undefined
    • Mechanism of surface presentation despite ER-retrieval signal unexplained
  6. 2015 Medium

    Implicated TMX3 oxidoreductase activity in protein-thiol homeostasis relevant to mutant huntingtin clearance.

    Evidence In vitro oxidoreductase screen plus lentiviral striatal overexpression in a mouse HD model with mHTT and atrophy readouts

    PMID:26664998

    Open questions at the time
    • Direct TMX3-mHTT interaction not shown
    • Mechanism of soluble mHTT reduction unresolved
  7. 2019 Medium

    Connected TMX3 to inter-organelle signaling, showing it promotes ER-mitochondria communication and restrains ROS to support NFAT1-dependent melanoma growth.

    Evidence siRNA knockdown with mitochondrial morphology/bioenergetics, ROS measurement, NFAT1 reporters, and xenografts

    PMID:31304984

    Open questions at the time
    • Molecular substrate at ER-mitochondria contacts unidentified
    • Single-lab finding without orthogonal genetic confirmation
  8. 2020 High

    Revealed a novel chaperone-like role, with TMX3 acting as an essential cofactor for functional assembly of insect nAChR heteromers.

    Evidence Heterologous expression in Xenopus oocytes with two-electrode voltage-clamp across multiple insect receptor subtypes

    PMID:32611810

    Open questions at the time
    • Whether redox activity is required for this assembly role not dissected
    • Relevance to mammalian receptor folding unknown
  9. 2024 Low

    Identified a candidate substrate-modulating interaction, TMX3 binding MT5-MMP and enhancing its η-secretase activity.

    Evidence Yeast two-hybrid screen of brain cDNA plus sAPPη production readout

    PMID:38345408

    Open questions at the time
    • No co-IP/pulldown confirmation of direct binding
    • Physiological relevance to APP processing untested
  10. 2025 Low

    Reported extracellular/secreted TMX3 in endothelial cells, extending its detected localization beyond the ER.

    Evidence Impermeable thiol labeling and mass spectrometry-based redox proteomics after diamide treatment

    PMID:40712755

    Open questions at the time
    • Single proteomics method without functional follow-up
    • Mechanism of secretion despite ER-retrieval signal unexplained

Open questions

Synthesis pass · forward-looking unresolved questions
  • The physiological substrates of TMX3 and the in vivo redox partner that reoxidizes its CGHC active site remain unidentified across all reported contexts.
  • No defined endogenous protein substrate
  • Reoxidation pathway unknown (not Ero1α)
  • Link between redox chemistry and the eye, melanoma, and nAChR phenotypes not mechanistically unified

Mechanism profile

Synthesis pass · controlled-vocabulary classification · explore literature graph →
Molecular activity
GO:0016491 oxidoreductase activity 2 GO:0044183 protein folding chaperone 1 GO:0140096 catalytic activity, acting on a protein 1
Localization
GO:0005783 endoplasmic reticulum 1 GO:0005886 plasma membrane 1
Pathway
R-HSA-392499 Metabolism of proteins 2
Partners

Evidence

Reading pass · 10 per-paper findings extracted from the source corpus
Year Finding Method Journal Conf PMIDs
2004 TMX3 is a type I transmembrane protein of the endoplasmic reticulum with a single thioredoxin-like domain containing a CGHC active site, an N-terminal signal sequence, a transmembrane domain, and a C-terminal KKKD ER-retrieval sequence. It localizes to the ER membrane (confirmed by immunofluorescence and alkaline extraction), contains EndoH-sensitive glycans, and exhibits oxidase activity in vitro. Its recombinant luminal domain has a redox potential of -0.157 V, similar to PDI and ERp57, and is partially oxidized in human cells. Immunofluorescence microscopy, alkaline extraction/membrane fractionation, circular dichroism spectroscopy, redox potential determination (in vitro), in vitro oxidase activity assay The Journal of biological chemistry High 15623505
2007 The ER-luminal region of TMX3 contains three thioredoxin-like domains: one N-terminal redox-active domain (a) with a CGHC active site and two enzymatically inactive domains (b and b'). The isolated reduced a domain is folded but is greatly destabilized upon oxidation. The adjacent b domain stabilizes the a domain against chemical denaturation and proteolysis in both oxidized and reduced forms, demonstrating that redox-inactive thioredoxin-like domains can function in stabilizing neighboring redox-active domains. Recombinant domain expression (a, ab, abb' constructs), NMR/biophysical methods, chemical denaturation assays, limited proteolysis, molecular modeling The Journal of biological chemistry High 17881353
2010 Mixed-disulfide complexes of Ero1α do not form detectably with TMX3 (unlike PDI, ERp57, and ERp72), indicating TMX3 is not a substrate of the Ero1α oxidase pathway for ER disulfide generation. Mixed-disulfide trapping, co-immunoprecipitation, experiments in ERO1-deficient cells The EMBO journal Medium 20802462
2010 TMX3 is required for normal eye development in zebrafish: morpholino knockdown of the TMX3 orthologue produced significantly smaller eyes and reduced islet-1 labeling of retinal ganglion cells. Co-injection of wild-type human TMX3 mRNA rescued the small-eye phenotype, but the p.Arg39Gln missense mutant (found in a microphthalmia patient) did not rescue, establishing that the redox-active domain function is necessary for TMX3's role in eye morphogenesis. Zebrafish antisense morpholino knockdown, mRNA rescue experiments (wild-type vs. patient mutant TMX3), islet-1 immunolabeling PloS one High 20485507
2009 TMX3 is present on the surface of resting platelets and does not increase in surface expression following platelet activation, unlike other thiol isomerases (ERp72, ERp57, ERp44, ERp29) that are released and relocate to the surface upon activation. Immunoblotting, flow cytometry, cell-surface biotinylation, gene array analysis British journal of haematology Medium 19995400
2019 TMX3 (together with TMX1) promotes ER-mitochondria communication. Knockdown of TMX3 altered mitochondrial organization, enhanced mitochondrial bioenergetics, and elevated mitochondrial- and NOX4-derived ROS. TMX3 knockdown-induced oxidative stress suppressed melanoma proliferation, migration, and xenograft tumor growth by inhibiting NFAT1 transcription factor activity. siRNA knockdown, mitochondrial morphology imaging, bioenergetics assays, ROS measurement, xenograft tumor growth assay, NFAT1 reporter assays The EMBO journal Medium 31304984
2020 TMX3 functions as an essential cofactor enabling robust functional expression of insect nicotinic acetylcholine receptor (nAChR) heteromers (from honeybee, bumblebee, and fruit fly) in Xenopus laevis oocytes, a role not previously described for any PDI family member in ion channel assembly. Heterologous expression in Xenopus laevis oocytes, two-electrode voltage-clamp electrophysiology Proceedings of the National Academy of Sciences of the United States of America High 32611810
2015 Overexpression of TMX3 (and TRX1) in a lentiviral mouse model of Huntington's disease decreased soluble mutant huntingtin (mHTT) levels in cultured cells and reduced mHTT-induced striatal neuronal atrophy in vivo, implicating TMX3's thiol-disulfide oxidoreductase activity in protein-thiol homeostasis relevant to mHTT clearance. In vitro genetic screen of oxidoreductases, lentiviral overexpression in mouse striatum, mHTT aggregate/soluble level quantification, neuronal atrophy measurement PLoS currents Medium 26664998
2024 TMX3 was identified as a binding partner of MT5-MMP (membrane-type 5 matrix metalloproteinase) via yeast two-hybrid screen of a human brain cDNA library, and TMX3 binding to MT5-MMP resulted in a significant increase in MT5-MMP η-secretase activity (sAPPη production), suggesting TMX3 facilitates MT5-MMP processing of amyloid precursor protein. Yeast two-hybrid screen, sAPPη production assay (functional readout) Journal of cellular physiology Low 38345408
2025 TMX3 is secreted by vascular endothelial cells and detected as an oxidized extracellular protein on the cell surface following diamide treatment, providing the first evidence of TMX3 secretion in endothelial cells. Plasma membrane-impermeable thiol labeling, mass spectrometry-based redox proteomics Journal of proteomics Low 40712755

Source papers

Stage 0 corpus · 28 papers · ranked by NIH iCite citations
Year Title Journal Citations PMID
2010 Disulphide production by Ero1α-PDI relay is rapid and effectively regulated. The EMBO journal 119 20802462
2009 Platelets release novel thiol isomerase enzymes which are recruited to the cell surface following activation. British journal of haematology 86 19995400
2020 Cofactor-enabled functional expression of fruit fly, honeybee, and bumblebee nicotinic receptors reveals picomolar neonicotinoid actions. Proceedings of the National Academy of Sciences of the United States of America 81 32611810
2004 Identification and characterization of a novel thioredoxin-related transmembrane protein of the endoplasmic reticulum. The Journal of biological chemistry 72 15623505
2019 Redox signals at the ER-mitochondria interface control melanoma progression. The EMBO journal 70 31304984
2015 Extracellular Thiol Isomerases and Their Role in Thrombus Formation. Antioxidants & redox signaling 61 26467859
2020 Thioredoxin-Related Transmembrane Proteins: TMX1 and Little Brothers TMX2, TMX3, TMX4 and TMX5. Cells 39 32878123
2010 A male with unilateral microphthalmia reveals a role for TMX3 in eye development. PloS one 33 20485507
2010 A maternally inherited chromosome 18q22.1 deletion in a male with late-presenting diaphragmatic hernia and microphthalmia-evaluation of DSEL as a candidate gene for the diaphragmatic defect. American journal of medical genetics. Part A 30 20358601
2007 Structure-function analysis of the endoplasmic reticulum oxidoreductase TMX3 reveals interdomain stabilization of the N-terminal redox-active domain. The Journal of biological chemistry 28 17881353
2022 A Human Hereditary Cardiomyopathy Shares a Genetic Substrate With Bicuspid Aortic Valve. Circulation 23 36325906
2023 Functional impact of subunit composition and compensation on Drosophila melanogaster nicotinic receptors-targets of neonicotinoids. PLoS genetics 21 36795653
2020 Robust functional expression of insect nicotinic acetylcholine receptors provides new insights into neonicotinoid actions and new opportunities for pest and vector control. Pest management science 21 33202087
2007 Nt mutation causing laterality defects associated with deletion of rotatin. Mammalian genome : official journal of the International Mammalian Genome Society 13 17551791
2022 Effects of cofactors RIC-3, TMX3 and UNC-50, together with distinct subunit ratios on the agonist actions of imidacloprid on Drosophila melanogaster Dα1/Dβ1 nicotinic acetylcholine receptors expressed in Xenopus laevis oocytes. Pesticide biochemistry and physiology 8 36127041
2015 Protein disulfide isomerases: Impact of thapsigargin treatment on their expression in melanoma cell lines. International journal of biological macromolecules 8 25912252
2015 Thiol-disulfide Oxidoreductases TRX1 and TMX3 Decrease Neuronal Atrophy in a Lentiviral Mouse Model of Huntington's Disease. PLoS currents 8 26664998
2024 Endoplasmic reticulum stress of endometrial mesenchymal stem cells in endometriosis. Tissue & cell 6 39217786
2024 Impact of a worker bee thoracic ganglion RIC-3 variant on the actions of acetylcholine and neonicotinoids on nicotinic receptors in Apis mellifera. Pest management science 5 39167025
2025 Binding site loops D and G make a stronger contribution than loop C to the actions of neonicotinoids on the NACHO-assisted, robustly expressed Drosophila melanogaster Dα1/Dβ1 nicotinic acetylcholine receptor. Pesticide biochemistry and physiology 3 40082022
2024 TMX5/TXNDC15, a natural trapping mutant of the PDI family is a client of the proteostatic factor ERp44. Life science alliance 3 39348940
2014 Trichinella spiralis: genome database searches for the presence and immunolocalization of protein disulphide isomerase family members. Journal of helminthology 3 25475092
2025 Redox proteomics workflow to unveil extracellular targets of oxidation in vascular endothelial cells. Journal of proteomics 2 40712755
2026 Effect of the R80T mutation in the nicotinic acetylcholine receptor β1 subunit on the susceptibility of Frankliniella occidentalis (Pergande) to neonicotinoids. Pest management science 1 41508997
2025 Membrane-Type 5 Matrix Metalloproteinase (MT5-MMP): Background and Proposed Roles in Normal Physiology and Disease. Biomolecules 1 40867559
2024 Identification of binding partners that facilitate membrane-type 5 matrix metalloproteinase (MT5-MMP) processing of amyloid precursor protein. Journal of cellular physiology 1 38345408
2024 Molecular characterization of a novel thioredoxin-related transmembrane protein gene AcTMX3 that plays important roles in antioxidant defence in Arma chinensis diapause. Insect molecular biology 1 39440724
2025 A panel of plasma proteins associated with venous thromboembolism in patients with prostate cancer. Cancer biomarkers : section A of Disease markers 0 41348521

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