Affinage

TMEM87A

Transmembrane protein 87A · UniProt Q8NBN3

Length
555 aa
Mass
63.4 kDa
Annotated
2026-06-10
17 papers in source corpus 12 papers cited in narrative 13 extracted findings
Cross-family judge vs UniProt: Affinage preferred faithfulness: 7/7 claims corpus-supported (100%)

Mechanistic narrative

Synthesis pass · prose summary of the discoveries below

TMEM87A is a Golgi-resident, GOLD-domain seven-transmembrane protein that links Golgi physiology to membrane trafficking, mechanotransduction, and tumor cell behavior (PMID:36373655, PMID:38992057). Its Golgi/TGN localization depends on retrograde tethering: TMEM87A overexpression partially rescues endosome-to-TGN retrograde transport in VPS54-null cells (PMID:26157166), and acute GARP-complex disruption mislocalizes and degrades the protein (PMID:40100055). A high-resolution cryo-EM structure positions TMEM87A within the GOLD-domain seven-transmembrane (GOST) family alongside the Wnt chaperone WLS, with a large membrane-facing cavity consistent with handling membrane-associated cargo (PMID:36373655). Functionally, TMEM87A operates as a voltage-dependent cation channel that maintains Golgi pH; its loss causes Golgi overacidification and fragmentation, altered glycosylation, and impaired spatial memory in knockout mice (PMID:38992057). The same channel activity is mechanically gated: TMEM87A reconstitutes mechanically activated currents in PIEZO1-deficient cells and is required for mechanotransduction in low-threshold mechanoreceptors, with its loss producing touch insensitivity in mice (PMID:32228863, PMID:38422143). Through its Golgi pH function, TMEM87A confers ferroptosis resistance by enabling FSP1-mediated coenzyme Q reduction, and its ablation suppresses tumor growth while enhancing antitumor T cell responses (PMID:42014864). TMEM87A further forms a mechanosensing complex with CHP1 that sustains WNT5A and Hedgehog/PTCH1 signaling, and its loss reduces melanoma motility and microgravity-dependent invasion linked to focal adhesion and YAP1 redistribution (PMID:40090965, PMID:42258092).

Mechanistic history

Synthesis pass · year-by-year structured walk · 11 steps
  1. 2015 Medium

    Established TMEM87A as a Golgi protein functionally tied to retrograde membrane trafficking, the first clue to its cellular role.

    Evidence Genome-wide haploid screen plus overexpression rescue of transport in VPS54-knockout human cells

    PMID:26157166

    Open questions at the time
    • Did not define molecular mechanism by which TMEM87A supports transport
    • No direct interaction partners identified
    • Rescue was partial
  2. 2020 High

    Showed TMEM87A is sufficient to generate mechanically activated currents independently of PIEZO1, reframing it as a candidate mechanotransduction channel and linking it to cell motility and adhesion.

    Evidence Heterologous expression in PIEZO1-deficient cells with patch-clamp, plus CRISPR knockout motility/adhesion assays in melanoma cells

    PMID:32228863

    Open questions at the time
    • Did not resolve whether TMEM87A is the pore-forming subunit
    • Gating mechanism unknown
    • Relationship between channel activity and Golgi trafficking role unresolved
  3. 2020 Medium

    Demonstrated an oncogenic TMEM87A-RASGRF1 fusion can transform cells, an event involving the TMEM87A locus rather than its native channel function.

    Evidence RNA-seq fusion detection, NIH/3T3 transformation and CRISPR-edited PC9 cells with MAPK readout

    PMID:32312893

    Open questions at the time
    • Oncogenicity driven by RASGRF1 GEF activity, not native TMEM87A function
    • Contribution of the TMEM87A portion to fusion activity undefined
    • Single exceptional-responder context
  4. 2022 High

    Provided the first structure, placing TMEM87A in the GOST family with WLS and supporting a membrane-cargo trafficking role, while structurally arguing against ion-channel/GPCR function.

    Evidence Cryo-EM in lipid nanodiscs with structural and functional comparison to WLS

    PMID:36373655

    Open questions at the time
    • Structural inference against channel function conflicts with electrophysiology
    • No cargo directly identified
    • Static structure does not capture gating or conduction
  5. 2022 Low

    Linked TMEM87A TGN residence to Vti1a/b-dependent retrograde trafficking, reinforcing its dependence on retrograde transport machinery for steady-state localization.

    Evidence Immunofluorescence intensity quantification in Vti1a/b double-knockout neurons

    PMID:36460703

    Open questions at the time
    • Single localization measurement without mechanistic follow-up
    • No direct interaction with Vti1a/b shown
    • Functional consequence of mislocalization untested
  6. 2024 High

    Resolved the channel controversy by demonstrating TMEM87A is a voltage-dependent cation channel that regulates Golgi pH, connecting its molecular activity to Golgi integrity, glycosylation and brain function in vivo.

    Evidence Patch-clamp with gluconate inhibition, multiple cryo-EM structures, and knockout mice with Golgi, glycosylation and memory phenotypes

    PMID:38992057

    Open questions at the time
    • Direct ion selectivity and conduction path not fully resolved
    • Mechanism coupling Golgi pH to glycosylation unclear
    • Reconciliation with 2022 structural channel-negative interpretation not fully addressed
  7. 2024 High

    Established TMEM87A as necessary for touch sensation by genetically restoring mechanically activated currents in null neurons across mouse and human systems.

    Evidence Elkin1 knockout mice, neuronal rescue, behavioral touch assays, and siRNA knockdown in human induced sensory neurons with electrophysiology

    PMID:38422143

    Open questions at the time
    • Whether TMEM87A forms the pore versus an essential subunit unresolved
    • Force-transmission mechanism to the channel unknown
    • Link between Golgi channel role and surface mechanotransduction undefined
  8. 2025 Medium

    Peer-reviewed confirmation that GARP-mediated retrograde tethering controls TMEM87A localization and stability, solidifying the trafficking dependence first seen in 2015.

    Evidence mAID degron VPS54 depletion with immunofluorescence and western blot

    PMID:40100055

    Open questions at the time
    • Direct GARP-TMEM87A contact not demonstrated
    • Degradation pathway upon mislocalization unidentified
    • Functional consequence on channel activity untested
  9. 2025 Medium

    Connected TMEM87A to mechanically responsive tumor cell behavior, showing its requirement for microgravity-induced cytoskeletal, focal adhesion and YAP1 changes and spheroid invasion.

    Evidence ELKIN1 knockout cells under simulated microgravity with focal adhesion/YAP1 imaging and organotypic invasion assay

    PMID:40090965

    Open questions at the time
    • Mechanism linking TMEM87A to YAP1 redistribution unknown
    • Single-lab phenotypic study
    • Whether channel activity is required not tested
  10. 2026 High

    Defined a Golgi pH-dependent role for TMEM87A in ferroptosis resistance and tumor progression, mechanistically coupling its pH-regulating activity to FSP1/coenzyme Q antioxidant defense.

    Evidence Knockout/depletion with Golgi pH, FSP1 activity and CoQ reduction assays plus multiple in vivo tumor models and immune profiling

    PMID:42014864

    Open questions at the time
    • How Golgi pH controls FSP1/CoQ chemistry mechanistically unclear
    • Direct versus indirect effect on FSP1 unresolved
    • Contribution of channel versus trafficking activity not separated
  11. 2026 Medium

    Identified CHP1 as a direct physical partner forming a TMEM87A mechanosensing complex that drives WNT5A and Hedgehog signaling in tumor growth and metastasis.

    Evidence Co-IP, CETSA, MST, SPR binding assays plus CRISPR knockout in spheroids and orthotopic mouse models with pathway western blots

    PMID:42258092

    Open questions at the time
    • Mechanism by which the complex transduces signal to WNT/Hedgehog undefined
    • Single-lab characterization
    • Whether complex requires channel/mechanical activity untested

Open questions

Synthesis pass · forward-looking unresolved questions
  • It remains unresolved how TMEM87A's Golgi pH-regulating channel activity, its plasma-membrane mechanotransduction role, and its GOST-family cargo-trafficking function are mechanistically unified within one protein.
  • No model reconciling Golgi-channel and surface mechanosensing roles
  • Pore-forming versus accessory-subunit status not definitively established
  • Native trafficking cargo not identified

Mechanism profile

Synthesis pass · controlled-vocabulary classification · explore literature graph →
Molecular activity
GO:0005215 transporter activity 3 GO:0140299 molecular sensor activity 2
Localization
GO:0005794 Golgi apparatus 4 GO:0005886 plasma membrane 2
Pathway
R-HSA-5653656 Vesicle-mediated transport 2 R-HSA-162582 Signal Transduction 1 R-HSA-5357801 Programmed Cell Death 1
Partners

Evidence

Reading pass · 13 per-paper findings extracted from the source corpus
Year Finding Method Journal Conf PMIDs
2015 TMEM87A is a Golgi-resident membrane protein involved in endosome-to-TGN retrograde transport; overexpression of TMEM87A in VPS54-KO cells partially restored both endosome-to-TGN retrograde transport and post-Golgi anterograde transport of cell-surface proteins. Genome-wide screen in human haploid cells, VPS54 knockout rescue assay, overexpression of TMEM87A in KO cells with transport readouts Molecular biology of the cell Medium 26157166
2020 TMEM87A (renamed Elkin1) functions as a mechanically activated ion channel; heterologous expression of TMEM87A in PIEZO1-deficient cells (which have no baseline mechanosensitivity) reconstituted mechanically activated currents, establishing TMEM87A as sufficient for a PIEZO1-independent mechanoelectrical transduction pathway. Elkin1 deletion in melanoma cells caused decreased motility, increased cell-substrate adhesion, and decreased homotypic cell-cell adhesion. Heterologous expression in PIEZO1-deficient cells, patch-clamp electrophysiology, CRISPR knockout with motility and adhesion assays, organotypic spheroid dissociation assay eLife High 32228863
2022 Cryo-EM structure of human TMEM87A in lipid nanodiscs revealed a GOLD (Golgi-dynamics) domain atop a seven-transmembrane helix domain with a large cavity open to solution and the outer membrane leaflet. Structural analysis placed TMEM87A in a family of GOLD-domain seven-transmembrane helix (GOST) proteins including WLS, a chaperone for lipidated Wnt proteins, and found key structural determinants for WLS/trafficking function are conserved in TMEM87A, suggesting a role in trafficking membrane-associated cargo. Cryo-EM structure determination in lipid nanodiscs; structural comparison and functional analysis eLife High 36373655
2022 Structural and functional analyses of the cryo-EM structure suggested TMEM87A may NOT function as an ion channel or G-protein coupled receptor, contrasting with prior electrophysiological reports. Cryo-EM structure analysis and functional characterization eLife Medium 36373655
2024 TMEM87A (renamed GolpHCat) is a voltage-dependent cation channel in the Golgi apparatus that regulates Golgi pH; it displays unique voltage-dependent currents potently inhibited by gluconate. Three high-resolution cryo-EM structures of human GolpHCat provided structural insight into ion conduction. GolpHCat-knockout mice exhibited fragmented Golgi morphology, altered protein glycosylation, and impaired hippocampus-dependent spatial memory. Patch-clamp electrophysiology, gluconate inhibition assay, cryo-EM structure determination, TMEM87A knockout mouse model with Golgi morphology assessment, glycosylation analysis, and spatial memory behavioral testing Nature communications High 38992057
2024 ELKIN1 (TMEM87A) is necessary for mechanically activated (MA) currents in low-threshold mechanoreceptors; loss of Elkin1 in mice caused touch insensitivity. Reintroduction of Elkin1 into sensory neurons from Elkin1 knockout mice restored MA currents. siRNA knockdown of ELKIN1 in induced human sensory neurons substantially reduced indentation-induced MA currents. Elkin1 knockout mice, behavioral touch sensitivity assays, patch-clamp electrophysiology in sensory neurons, neuronal rescue by Elkin1 reintroduction, siRNA knockdown in human induced sensory neurons with electrophysiology Science (New York, N.Y.) High 38422143
2024 TMEM87A (GolpHCat/ELKIN1) is mislocalized and degraded upon acute GARP complex disruption (VPS54 mAID-degron rapid depletion), identifying TMEM87A as a Golgi protein whose localization depends on GARP-mediated retrograde vesicle tethering. mAID degron-mediated rapid VPS54 depletion in human cells; immunofluorescence and protein level analysis of TMEM87A localization bioRxiv : the preprint server for biologypreprint Medium 39416116
2025 TMEM87A localization and protein levels are reduced upon acute GARP complex disruption, confirmed in the peer-reviewed version of the GARP depletion study. mAID degron-mediated VPS54 depletion in human cells, immunofluorescence, western blot for TMEM87A Traffic (Copenhagen, Denmark) Medium 40100055
2022 TMEM87A is a recycling TGN protein whose staining intensity at the TGN is decreased in Vti1a/b-deficient neurons, linking its TGN localization to Vti1a/b-dependent retrograde trafficking. Vti1a/b double-knockout neurons, immunofluorescence staining intensity quantification of TMEM87A at the TGN Scientific reports Low 36460703
2025 ELKIN1 (TMEM87A) deletion prevented simulated microgravity-induced alterations of cellular structure, focal adhesion changes, and YAP1 transcription factor redistribution. Melanoma cell invasion from organotypic spheroids was reduced in simulated microgravity in an ELKIN1-dependent manner. ELKIN1 knockout cells in simulated microgravity conditions, immunofluorescence for focal adhesions and YAP1 localization, organotypic spheroid invasion assay NPJ microgravity Medium 40090965
2020 A TMEM87A-RASGRF1 gene fusion was identified in a lung cancer exceptional responder; the fusion drives RAS activation via RASGRF1 guanine exchange factor activity and activates MAPK signaling, as demonstrated in NIH/3T3 transformation assays and CRISPR-edited PC9 cells expressing the fusion. RNA-seq identification of fusion, NIH/3T3 oncogenicity assay, CRISPR-Cas9 editing of PC9 cells to express fusion, MAPK pathway activation measurement Clinical cancer research Medium 32312893
2026 TMEM87A maintains Golgi pH homeostasis and mediates resistance to ferroptosis; depletion of TMEM87A caused Golgi overacidification, which impaired FSP1-mediated reduction of coenzyme Q, thereby sensitizing cells to ferroptosis. TMEM87A ablation suppressed tumor progression in multiple murine models and enhanced antitumor T cell responses. TMEM87A knockout/depletion, Golgi pH measurement, FSP1 activity assay, coenzyme Q reduction assay, in vivo tumor models (melanoma, colorectal cancer, liver cancer), immune cell analysis Nature cancer High 42014864
2026 CHP1 (calcineurin homologous protein 1) physically interacts with TMEM87A, forming a mechanosensing complex; knockout of either CHP1 or TMEM87A downregulated WNT5A/GPC6 and inhibited WNT5A/Hedgehog pathways. Sodium gluconate disrupted CHP1-TMEM87A binding and inhibited downstream Hedgehog/PTCH1 signaling. In vivo, CHP1 or TMEM87A knockout suppressed orthotopic ovarian tumor growth and metastasis. Co-immunoprecipitation, CETSA, microscale thermophoresis (MST), surface plasmon resonance (SPR), CRISPR knockout in 3D spheroid models and in vivo NSG mouse orthotopic model, pathway analysis by western blot Molecular biomedicine Medium 42258092

Source papers

Stage 0 corpus · 17 papers · ranked by NIH iCite citations
Year Title Journal Citations PMID
2015 Post-Golgi anterograde transport requires GARP-dependent endosome-to-TGN retrograde transport. Molecular biology of the cell 86 26157166
2020 TMEM87a/Elkin1, a component of a novel mechanoelectrical transduction pathway, modulates melanoma adhesion and migration. eLife 51 32228863
2020 Circular RNA TMEM87A promotes cell proliferation and metastasis of gastric cancer by elevating ULK1 via sponging miR-142-5p. Journal of gastroenterology 36 33155080
2024 Transmembrane proteins with unknown function (TMEMs) as ion channels: electrophysiological properties, structure, and pathophysiological roles. Experimental & molecular medicine 34 38556553
2024 Touch sensation requires the mechanically gated ion channel ELKIN1. Science (New York, N.Y.) 24 38422143
2020 Identification of a RAS-activating TMEM87A-RASGRF1 Fusion in an Exceptional Responder to Sunitinib with Non-Small Cell Lung Cancer. Clinical cancer research : an official journal of the American Association for Cancer Research 20 32312893
2022 Structure of the GOLD-domain seven-transmembrane helix protein family member TMEM87A. eLife 19 36373655
2020 Identification of Target Genes in Hypertension and Left Ventricular Remodeling. Medicine 15 32664164
2024 GolpHCat (TMEM87A), a unique voltage-dependent cation channel in Golgi apparatus, contributes to Golgi-pH maintenance and hippocampus-dependent memory. Nature communications 9 38992057
2022 Vti1a/b support distinct aspects of TGN and cis-/medial Golgi organization. Scientific reports 4 36460703
2025 The mechanosensitive channel ELKIN1 regulates cellular adaptations to simulated microgravity. NPJ microgravity 3 40090965
2025 Acute GARP Depletion Disrupts Vesicle Transport, Leading to Severe Defects in Sorting, Secretion and O-Glycosylation. Traffic (Copenhagen, Denmark) 2 40100055
2024 Inflammation alters the expression and activity of the mechanosensitive ion channels in periodontal ligament cells. European journal of orthodontics 2 39789885
2026 TMEM87A suppresses ferroptosis and increases cancer immunotherapy resistance by maintaining the Golgi apparatus pH homeostasis. Nature cancer 1 42014864
2024 Acute GARP depletion disrupts vesicle transport, leading to severe defects in sorting, secretion, and O-glycosylation. bioRxiv : the preprint server for biology 1 39416116
2026 A Decade-Old Atlas of TMEM (Transmembrane) Protein Family in Lung Cancer: Lessons Learnt and Future Directions. International journal of molecular sciences 0 41596760
2026 Targeting the Calcineurin Homologous Protein 1 (CHP1)-Transmembrane Protein 87A (TMEM87A) mechanosensing complex: a druggable vulnerability in metastatic ovarian cancer. Molecular biomedicine 0 42258092

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