Affinage

SPATA17

Spermatogenesis-associated protein 17 · UniProt Q96L03

Length
361 aa
Mass
43.5 kDa
Annotated
2026-06-10
16 papers in source corpus 5 papers cited in narrative 5 extracted findings
Cross-family judge faithfulness: 4/4 claims corpus-supported (100%)

Mechanistic narrative

Synthesis pass · prose summary of the discoveries below

SPATA17 is a testis-enriched protein that functions in spermatogenesis, with roles in germ cell apoptosis regulation and in the structural organization of the spermatozoal flagellum (PMID:16395525, PMID:39686771). In the adult testis it localizes to the cytoplasm of round and elongating spermatids, and its overexpression in spermatogonial GC-1 cells accelerates apoptosis in a dose-dependent manner (PMID:16395525); this pro-apoptotic effect is recapitulated in vivo, where spermatocyte-specific overexpression in transgenic mice increases apoptotic germ cells without gross testicular defects (PMID:23079716). In mature sperm, SPATA17 is a component of the C1a projection of the flagellar axoneme, and its proper expression along the flagellum depends on SPAG17-mediated axonemal integrity, since loss-of-function SPAG17 mutations disrupt SPATA17 distribution (PMID:39686771). The protein carries calmodulin-binding IQ motifs, indicating potential calcium/calmodulin-dependent regulation (PMID:21108043). Beyond these observations, the molecular activity and direct binding partners of SPATA17 have not been characterized in the available corpus.

Mechanistic history

Synthesis pass · year-by-year structured walk · 5 steps
  1. 2006 Medium

    Establishing where SPATA17 acts and what cellular consequence it produces, the first study placed the protein in spermatid cytoplasm and linked its overexpression to germ cell apoptosis.

    Evidence Immunohistochemistry localization in mouse testis plus flow cytometry and Hoechst staining apoptosis assays following overexpression in GC-1 cells

    PMID:16395525

    Open questions at the time
    • Apoptotic pathway and effectors engaged by SPATA17 not identified
    • No loss-of-function evidence to establish endogenous role
    • Mechanism connecting localization to apoptosis unknown
  2. 2009 Low

    To test whether SPATA17 contributes to meiosis in humans, a genetic association implicated a SPATA17 coding variant in meiotic arrest azoospermia.

    Evidence Sequencing of SPATA17 coding regions and SNP allele-frequency comparison across azoospermia patients and controls

    PMID:19483714

    Open questions at the time
    • Genetic association only, no functional test of the variant
    • Small cohort
    • Causal link to meiotic arrest unestablished
  3. 2010 Low

    Probing how SPATA17 might be regulated, domain analysis identified calmodulin-binding IQ motifs and confirmed testis-predominant expression and the apoptotic phenotype.

    Evidence Bioinformatic IQ motif identification, multi-tissue RT-PCR/Northern blot, and flow cytometry/DNA ladder apoptosis assays in GC-1 cells (zebrafish ortholog)

    PMID:21108043

    Open questions at the time
    • IQ motif function not experimentally dissected
    • Calmodulin binding not demonstrated biochemically
    • No mechanistic link between IQ motifs and apoptosis
  4. 2012 Medium

    Moving from cell lines to a whole-animal context, transgenic overexpression confirmed that elevated SPATA17 drives germ cell apoptosis in vivo.

    Evidence PGK2 promoter-driven SPATA17 transgenic mice with histology and apoptosis quantification in testis

    PMID:23079716

    Open questions at the time
    • Overexpression model does not reveal endogenous loss-of-function role
    • No fertility or structural defect observed, leaving physiological function unclear
    • Downstream apoptotic mediators not identified
  5. 2024 Medium

    Defining a structural role in the mature gamete, SPATA17 was localized to the axonemal C1a projection and shown to depend on SPAG17 for proper flagellar distribution.

    Evidence Immunofluorescence and Western blot of human spermatozoa with homozygous SPAG17 mutations and TEM of axoneme cross-sections

    PMID:39686771

    Open questions at the time
    • Direct SPATA17-SPAG17 physical interaction not demonstrated
    • Functional contribution of SPATA17 to flagellar motility untested
    • Relationship between axonemal role and earlier apoptotic role unresolved

Open questions

Synthesis pass · forward-looking unresolved questions
  • The molecular activity of SPATA17 and the mechanism connecting its pro-apoptotic role in spermatids to its structural role in the flagellar axoneme remain undefined.
  • No biochemical activity or direct binding partner established
  • Calmodulin regulation predicted but unproven
  • Endogenous loss-of-function phenotype not characterized

Mechanism profile

Synthesis pass · controlled-vocabulary classification · explore literature graph →
Localization
GO:0005829 cytosol 1 GO:0005929 cilium 1
Partners
Complex memberships
flagellar axoneme C1a projection

Evidence

Reading pass · 5 per-paper findings extracted from the source corpus
Year Finding Method Journal Conf PMIDs
2006 Mouse Spata17 protein is localized to the cytoplasm of round spermatids and elongating spermatids within seminiferous tubules of the adult testis, and its overexpression in GC-1 spermatogonial cells accelerates cell apoptosis in a dose-dependent manner. Immunohistochemistry (subcellular localization), flow cytometry and Hoechst 33258 staining (apoptosis assay), transfection of pcDNA3.1(-)/Spata17 into GC-1 cells (overexpression) Acta biochimica et biophysica Sinica Medium 16395525
2010 Zebrafish SPATA17 protein contains three calmodulin-binding IQ motifs, is expressed predominantly in testis, and its overexpression in GC-1 cells accelerates apoptosis as measured by flow cytometry and DNA laddering. Bioinformatic domain analysis (IQ motif identification), multi-tissue RT-PCR/Northern blot (expression), flow cytometry and genomic DNA ladder assay (apoptosis) in GC-1 cells Molecular biology reports Low 21108043
2012 Overexpression of human SPATA17 specifically in spermatocytes of transgenic male mice (driven by the PGK2 promoter) significantly increases apoptotic germ cells without causing gross testicular anatomical defects or infertility. Transgenic mouse generation with PGK2 promoter-driven SPATA17, histological analysis and apoptosis quantification in testis Molecular biology reports Medium 23079716
2009 A coding SNP (SNP3) in SPATA17 is significantly elevated in frequency among Japanese patients with meiotic arrest azoospermia compared to Sertoli-cell-only syndrome patients and healthy controls, suggesting SPATA17 has a functional role in meiosis during spermatogenesis. Sequencing of SPATA17 coding regions in 18 meiotic arrest patients, statistical comparison of SNP allele frequencies across patient and control groups Asian journal of andrology Low 19483714
2024 SPATA17 is a component of the C1a projection of the spermatozoal flagellar axoneme; loss-of-function SPAG17 mutations cause disrupted SPATA17 protein expression along the flagella, indicating SPATA17's localization and function depend on SPAG17-mediated axonemal integrity. Immunofluorescence and Western blot of patient spermatozoa with homozygous SPAG17 mutations; transmission electron microscopy of axoneme cross-sections Asian journal of andrology Medium 39686771

Source papers

Stage 0 corpus · 16 papers · ranked by NIH iCite citations
Year Title Journal Citations PMID
2011 Application of site and haplotype-frequency based approaches for detecting selection signatures in cattle. BMC genomics 115 21679429
2009 Identification of novel candidate loci for anorexia nervosa at 1q41 and 11q22 in Japanese by a genome-wide association analysis with microsatellite markers. Journal of human genetics 49 19680270
2013 De novo microduplications at 1q41, 2q37.3, and 8q24.3 in patients with VATER/VACTERL association. European journal of human genetics : EJHG 41 23549274
2011 Effects of decabromodiphenyl ether (BDE-209) on mRNA transcription of thyroid hormone pathway and spermatogenesis associated genes in Chinese rare minnow (Gobiocypris rarus). Environmental toxicology 39 21901812
2009 A single nucleotide polymorphism in SPATA17 may be a genetic risk factor for Japanese patients with meiotic arrest. Asian journal of andrology 16 19483714
2012 Overexpression of human SPATA17 protein induces germ cell apoptosis in transgenic male mice. Molecular biology reports 15 23079716
2020 Whole exome sequencing identifies multiple novel candidate genes in familial gastroschisis. Molecular genetics & genomic medicine 13 32163230
2006 Expression and identification of a novel apoptosis gene Spata17 (MSRG-11) in mouse spermatogenic cells. Acta biochimica et biophysica Sinica 12 16395525
2010 Overexpression a novel zebra fish spermatogenesis-associated gene 17 (SPATA17) induces apoptosis in GC-1 cells. Molecular biology reports 11 21108043
2022 Comprehensive Transcriptome Analysis of Gonadal and Somatic Tissues for Identification of Sex-Related Genes in the Largemouth Bass Micropterus salmoides. Marine biotechnology (New York, N.Y.) 9 35384611
2024 DNA methylation patterns in patients with asthenospermia and oligoasthenospermia. BMC genomics 8 38886667
2016 In silico analysis of candidate proteins sharing homology with Streptococcus agalactiae proteins and their role in male infertility. Systems biology in reproductive medicine 7 27802063
2024 Novel homozygous SPAG17 variants cause human male infertility through multiple morphological abnormalities of spermatozoal flagella related to axonemal microtubule doublets. Asian journal of andrology 6 39686771
2014 Genetic analysis of intracapillary glomerular lipoprotein deposits in aging mice. PloS one 3 25353171
2026 The Molecular Characterization and Functional Analysis of Pomacea canaliculata Boule: A Central Player in Spermatogenesis and Male Fertility. Biology 0 41972556
2024 Feature Engineering-Assisted Drug Repurposing on Disease-Drug Transcriptome Profiles in Gastric Cancer. Assay and drug development technologies 0 38572922

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