Affinage

SNX20

Sorting nexin-20 · UniProt Q7Z614

Length
316 aa
Mass
36.2 kDa
Annotated
2026-06-10
5 papers in source corpus 2 papers cited in narrative 4 extracted findings
Cross-family judge vs UniProt: Affinage preferred faithfulness: 2/3 claims corpus-supported (67%)

Mechanistic narrative

Synthesis pass · prose summary of the discoveries below

SNX20 (SLIC-1) is an endosomal sorting nexin that controls the subcellular trafficking of the leukocyte adhesion receptor PSGL-1 (PMID:18196517). It binds directly to the cytoplasmic domain of PSGL-1 through a mapped interaction motif (PMID:18196517), and its Phox homology (PX) domain binds phosphoinositides to target the resulting PSGL-1/SNX20 complex to endosomes (PMID:18196517). Loss of the murine homologue does not impair PSGL-1-dependent signaling or neutrophil adhesion, indicating that SNX20 acts in endosomal recycling/sorting of PSGL-1 rather than in outside-in signaling or leukocyte recruitment (PMID:18196517). Beyond this PSGL-1 trafficking role, no further binding partners or mechanistic detail for SNX20 have been characterized in the available corpus (PMID:30072438).

Mechanistic history

Synthesis pass · year-by-year structured walk · 4 steps
  1. 2008 Medium

    Establishing a physical partner for SNX20 defined its first molecular function: a yeast two-hybrid screen identified direct binding to the cytoplasmic domain of the adhesion receptor PSGL-1.

    Evidence Yeast two-hybrid screen, reciprocal co-immunoprecipitation, and motif mapping

    PMID:18196517

    Open questions at the time
    • Binding interface defined only by motif mapping, not by structure
    • Whether SNX20 binds other receptor tails was not tested
  2. 2008 Medium

    Localizing the complex addressed where SNX20 acts: its PX domain binds phosphoinositides and targets the PSGL-1/SNX20 complex to endosomes, placing SNX20 in the membrane sorting machinery.

    Evidence Colocalization imaging and subcellular fractionation

    PMID:18196517

    Open questions at the time
    • Specific phosphoinositide species bound not resolved
    • No direct lipid-binding biochemistry reported
  3. 2008 Medium

    A knockout addressed whether SNX20 contributes to PSGL-1 signaling versus trafficking: loss of the murine homologue left PSGL-1-dependent signaling and neutrophil adhesion intact, confining SNX20's role to endosomal sorting rather than leukocyte recruitment.

    Evidence Knockout mouse with neutrophil adhesion and signaling assays

    PMID:18196517

    Open questions at the time
    • Direct measurement of PSGL-1 endosomal cycling kinetics not shown
    • Possible redundancy with related sorting nexins not assessed
  4. 2018 Low

    Domain analysis placed SNX20 in the SNX-PXB family of predicted endosome-associated scaffolds, but no SNX20-specific interactome was generated.

    Evidence Quantitative proteomics on SNX21 with domain-based classification of SNX20

    PMID:30072438

    Open questions at the time
    • No direct experiment performed on SNX20 in this study
    • SNX20 binding partners beyond PSGL-1 remain unidentified
    • Scaffold function is predicted, not demonstrated

Open questions

Synthesis pass · forward-looking unresolved questions
  • Whether SNX20 has cargoes or functions beyond PSGL-1, and the molecular consequences of its endosomal sorting activity, remain undefined.
  • No SNX20-specific interactome
  • No structural model of the PX or PXB domains
  • Functional significance of PSGL-1 recycling not established

Mechanism profile

Synthesis pass · controlled-vocabulary classification · explore literature graph →
Molecular activity
GO:0008289 lipid binding 1 GO:0060090 molecular adaptor activity 1
Localization
GO:0005768 endosome 1
Pathway
R-HSA-5653656 Vesicle-mediated transport 2
Partners

Evidence

Reading pass · 4 per-paper findings extracted from the source corpus
Year Finding Method Journal Conf PMIDs
2008 SLIC-1/SNX20 directly interacts with the cytoplasmic domain of PSGL-1, as identified by yeast two-hybrid screen and confirmed by co-immunoprecipitation and motif mapping. Yeast two-hybrid screen, co-immunoprecipitation, motif mapping European journal of immunology Medium 18196517
2008 SLIC-1/SNX20 contains a Phox homology (PX) domain that binds phosphoinositides and targets the PSGL-1/SLIC-1 complex to endosomes, as demonstrated by colocalization experiments. Colocalization experiments, subcellular fractionation/imaging European journal of immunology Medium 18196517
2008 Deficiency of the murine homologue of SLIC-1/SNX20 did not modulate PSGL-1-dependent signaling nor alter neutrophil adhesion through PSGL-1, indicating that SNX20 functions as a sorting molecule cycling PSGL-1 into endosomes without impacting leukocyte recruitment. Knockout mouse model, neutrophil adhesion assays, signaling assays European journal of immunology Medium 18196517
2018 SNX20 and SNX21 are classified as SNX-PXB proteins based on the presence of a PX-associated B (PXB) domain, predicted to function as endosome-associated scaffolds; this paper established the SNX21 interactome but did not directly characterize SNX20 binding partners. Unbiased quantitative proteomics (for SNX21); classification of SNX20 as SNX-PXB protein by domain analysis Journal of cell science Low 30072438

Source papers

Stage 0 corpus · 5 papers · ranked by NIH iCite citations
Year Title Journal Citations PMID
2008 SLIC-1/sorting nexin 20: a novel sorting nexin that directs subcellular distribution of PSGL-1. European journal of immunology 22 18196517
2020 Increased SNX20 and PD-L1 Levels Can Predict the Clinical Response to PD-1 Inhibitors in Lung Adenocarcinoma. OncoTargets and therapy 8 33116590
2020 The molecular basis of gender disparities in smoking lung cancer patients. Life sciences 8 33358908
2018 Sorting nexin-21 is a scaffold for the endosomal recruitment of huntingtin. Journal of cell science 8 30072438
2022 [The Expression of RTN1 in Lung Adenocarcinoma and 
Its Effect on Immune Microenvironment]. Zhongguo fei ai za zhi = Chinese journal of lung cancer 4 35747917

Missed literature

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