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Showing SGSM1RUTBC2 is a alias.

SGSM1

Small G protein signaling modulator 1 · UniProt Q2NKQ1

Length
1148 aa
Mass
129.7 kDa
Annotated
2026-06-10
17 papers in source corpus 3 papers cited in narrative 5 extracted findings
Cross-family judge vs UniProt: Affinage preferred faithfulness: 4/4 claims corpus-supported (100%)

Mechanistic narrative

Synthesis pass · prose summary of the discoveries below

SGSM1 (RUTBC2) is a RUN- and TBC-domain-containing regulator of small G protein signaling that operates within the trans-Golgi network/endosomal system to couple Rab9A effector function to Rab36/Rab34 inactivation (PMID:17509819, PMID:22637480). Endogenous SGSM1 localizes to the trans-Golgi network (PMID:17509819), where it binds Rab9A specifically as an effector without acting as a Rab9A GAP, while displaying its highest GTPase-activating activity toward Rab34 and Rab36 (PMID:22637480). Cellular assays establish a functional GAP role: wild-type SGSM1 reduces membrane-associated Rab36, whereas the catalytically inactive R829A mutant does not (PMID:22637480). SGSM1 protein levels are controlled post-translationally by TRIM21-mediated ubiquitination and degradation, an event antagonized by SHISA3, with consequences for MAPK pathway activation and nasopharyngeal carcinoma cell invasion (PMID:30573520).

Mechanistic history

Synthesis pass · year-by-year structured walk · 5 steps
  1. 2007 Medium

    Established that SGSM1 is a candidate modulator of small G protein signaling by linking its RUN/TBC domain architecture to physical association with RAP and RAB subfamily GTPases.

    Evidence Co-immunoprecipitation after cDNA overexpression plus immunofluorescence

    PMID:17509819

    Open questions at the time
    • Co-IP from overexpression without in vitro reconstitution or mutagenesis
    • Did not distinguish effector binding from GAP activity
    • Specific Rab partners not resolved
  2. 2007 Medium

    Placed SGSM1 at the trans-Golgi network, anchoring its candidate role in vesicular transport to a defined compartment.

    Evidence Immunofluorescence of endogenous protein in mouse Neuro2a cells

    PMID:17509819

    Open questions at the time
    • Single method, single cell line
    • No functional consequence of localization demonstrated
    • Membrane-targeting determinants unknown
  3. 2012 High

    Resolved the dual molecular logic of SGSM1: it binds Rab9A as an effector without hydrolyzing its GTP, yet acts catalytically as a GAP preferentially toward Rab34 and Rab36, defining a substrate-versus-partner distinction.

    Evidence In vitro binding and RabGAP activity screening plus cell-based co-IP, with R829A catalytic mutant control

    PMID:22637480

    Open questions at the time
    • Physiological output of Rab9A binding not defined
    • Relative in vivo contribution of Rab34 vs Rab36 unresolved
    • No structural model of the Rab9A-SGSM1-Rab36 link
  4. 2012 High

    Demonstrated that SGSM1 GAP activity is functional in cells by showing wild-type but not R829A SGSM1 depletes membrane-bound Rab36.

    Evidence Active-site mutagenesis with membrane fractionation/co-localization in cultured cells

    PMID:22637480

    Open questions at the time
    • Downstream trafficking consequence of Rab36 inactivation not traced
    • Cell-type generality untested
  5. 2018 Medium

    Identified post-translational control of SGSM1 abundance, showing TRIM21 ubiquitinates and degrades it while SHISA3 stabilizes it, with downstream effects on MAPK signaling and tumor cell invasion.

    Evidence Reciprocal co-IP, ubiquitination assay, siRNA knockdown, and in vitro/in vivo invasion assays

    PMID:30573520

    Open questions at the time
    • Mechanistic link between SGSM1 GAP activity and MAPK regulation not established
    • Single lab
    • Ubiquitination site on SGSM1 not mapped

Open questions

Synthesis pass · forward-looking unresolved questions
  • How SGSM1 effector binding to Rab9A is mechanistically coupled to its GAP-driven inactivation of Rab36/Rab34, and how this trafficking activity connects to its TRIM21/SHISA3-regulated role in MAPK signaling, remains unresolved.
  • No structural basis for simultaneous Rab9A binding and Rab36 GAP catalysis
  • Causal chain from Rab36 inactivation to MAPK output undefined
  • Endogenous loss-of-function trafficking phenotype not characterized

Mechanism profile

Synthesis pass · controlled-vocabulary classification · explore literature graph →
Molecular activity
GO:0098772 molecular function regulator activity 2 GO:0140096 catalytic activity, acting on a protein 2
Localization
GO:0005794 Golgi apparatus 1
Pathway
R-HSA-5653656 Vesicle-mediated transport 2

Evidence

Reading pass · 5 per-paper findings extracted from the source corpus
Year Finding Method Journal Conf PMIDs
2007 SGSM1 protein contains RUN and TBC domain motifs and co-precipitates with RAP and RAB subfamily members of the small G protein superfamily, indicating it functions as a modulator of RAP/RAB-mediated signaling. Immunoprecipitation assay following expression of cDNA constructs; immunofluorescence microscopy Genomics Medium 17509819
2007 Endogenous Sgsm1 protein localizes to the trans-Golgi network in mouse Neuro2a cells, suggesting a role in vesicular transport at this compartment. Immunofluorescence microscopy of endogenous protein Genomics Medium 17509819
2012 RUTBC2 (SGSM1 alias) binds Rab9A specifically both in vitro and in cultured cells (acting as a Rab9A effector) but is NOT a GAP for Rab9A; instead, RUTBC2 displays highest GAP activity toward Rab34 and Rab36 in biochemical screening. In vitro binding assay, co-immunoprecipitation in cultured cells, biochemical RabGAP activity screening The Journal of biological chemistry High 22637480
2012 Expression of wild-type RUTBC2 (SGSM1) decreases membrane-associated Rab36, whereas the catalytically inactive mutant RUTBC2 R829A does not, establishing that RUTBC2 acts as a Rab36 GAP in cells. Active-site mutagenesis (R829A), membrane fractionation / immunofluorescence co-localization in cultured cells The Journal of biological chemistry High 22637480
2018 SGSM1 protein stability is regulated by the E3 ubiquitin ligase TRIM21, which ubiquitinates and degrades SGSM1; SHISA3 impedes this TRIM21-mediated ubiquitination, thereby stabilizing SGSM1 and suppressing MAPK pathway activation and NPC cell invasion. Co-immunoprecipitation, ubiquitination assay, siRNA knockdown of SGSM1, in vitro and in vivo invasion/metastasis assays Cancer research Medium 30573520

Source papers

Stage 0 corpus · 17 papers · ranked by NIH iCite citations
Year Title Journal Citations PMID
2007 Identification of three novel proteins (SGSM1, 2, 3) which modulate small G protein (RAP and RAB)-mediated signaling pathway. Genomics 54 17509819
2016 Loss of RNA expression and allele-specific expression associated with congenital heart disease. Nature communications 49 27670201
2018 Hypermethylation of SHISA3 Promotes Nasopharyngeal Carcinoma Metastasis by Reducing SGSM1 Stability. Cancer research 40 30573520
2012 RUTBC2 protein, a Rab9A effector and GTPase-activating protein for Rab36. The Journal of biological chemistry 30 22637480
2020 Dexmedetomidine alleviates postoperative cognitive dysfunction through circular RNA in aged rats. 3 Biotech 18 32226705
2017 Trivial role for NSMCE2 during in vitro proliferation and differentiation of male germline stem cells. Reproduction (Cambridge, England) 16 28576919
2019 Small G protein signalling modulator 2 (SGSM2) is involved in oestrogen receptor-positive breast cancer metastasis through enhancement of migratory cell adhesion via interaction with E-cadherin. Cell adhesion & migration 12 30744493
2020 Gene-Based Association Testing of Dichotomous Traits With Generalized Functional Linear Mixed Models Using Extended Pedigrees: Applications to Age-Related Macular Degeneration. Journal of the American Statistical Association 8 34321704
2004 Characterization of RUSC1 and RUSC2 genes in silico. Oncology reports 8 15375525
2022 The piRNAs present in the developing testes of Chinese indigenous Xiang pigs. Theriogenology 6 35738035
2021 Targeted massively parallel sequencing of candidate regions on chromosome 22q predisposing to multiple schwannomas: An analysis of 51 individuals in a single-center experience. Human mutation 5 34747535
2023 Uncovering structural variants associated with body weight and obesity risk in labrador retrievers: a genome-wide study. Frontiers in genetics 4 37799139
2021 Epigenetic mechanisms involved in the neuroprotective effect of scorpion extract in a Parkinson's disease murine model based on multi-omics approach. Journal of traditional Chinese medicine = Chung i tsa chih ying wen pan 4 34114396
2025 Clinical and Genetic Factors Associated with Intraoperative Minimum Alveolar Concentration Ratio: A Single-center Retrospective Cohort and Genome-wide Association Study. Anesthesiology 3 40489632
2024 Genome-wide association study of genetic markers of coat color patterns in Sumatran native cattle. Veterinary world 2 39829673
2023 Screening and identification of key biomarkers associated with amyotrophic lateral sclerosis and depression using bioinformatics. Medicine 2 38013317
2026 Endothelial NOX1 Drives Obesity via Skeletal Muscle Mitochondrial Dysfunction. Circulation research 0 42021739

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