Affinage

RMI2

RecQ-mediated genome instability protein 2 · UniProt Q96E14

Length
147 aa
Mass
15.9 kDa
Annotated
2026-04-28
13 papers in source corpus 10 papers cited in narrative 10 extracted findings

Mechanistic narrative

Synthesis pass · prose summary of the discoveries below

RMI2 is an OB-fold-containing scaffolding subunit of the BLM-Topo IIIα-RMI1-RMI2 (BTRR/BTR) dissolvasome complex that is essential for genome stability through its roles in double Holliday junction dissolution, DNA end resection, D-loop disruption, and ultrafine anaphase bridge resolution. RMI2 stabilizes the BTR complex, targets BLM helicase to chromatin and ultrafine DNA bridges, and—together with RMI1—potentiates the Topo IIIα-mediated strand-passage activity that forms a size-adjustable ssDNA gate capable of processive relaxation of negatively supercoiled DNA (PMID:18923083, PMID:35102151, PMID:41576078). The Topo IIIα-RMI1-RMI2 sub-complex orients BLM to efficiently disrupt D-loops, thereby directing homologous recombination toward non-crossover outcomes, and stimulates 5′ end resection processivity (PMID:35115525, PMID:25200081). During mitosis, MPS1 phosphorylates RMI2 at Ser112 to regulate its nuclear matrix redistribution and spindle assembly checkpoint maintenance, while CDK1-mediated destabilization of the BTRR complex at centromeres prevents inappropriate DNA unwinding (PMID:24108125, PMID:27977684).

Mechanistic history

Synthesis pass · year-by-year structured walk · 6 steps
  1. 2008 High

    Identification of RMI2 as a core BTR complex subunit resolved how Topo IIIα-RMI1 achieves stable association with BLM and efficient dHJ dissolution, establishing that RMI2 stabilizes the complex, recruits BLM to chromatin, and is required for dissolvasome function.

    Evidence Co-immunoprecipitation, siRNA depletion, dHJ dissolution assays, chromatin fractionation, and immunofluorescence in human cells

    PMID:18923083

    Open questions at the time
    • Structural basis of RMI2 OB-fold interactions within the complex not resolved
    • Whether RMI2 has catalytic activity or is purely scaffolding was unclear
    • In vivo phenotype of complete RMI2 loss not yet characterized
  2. 2013 High

    Three studies collectively established that the BTR complex functions beyond dHJ dissolution: RMI1-RMI2 potentiate Topo IIIα stimulation of BLM-mediated DNA unwinding and 5′ end resection processivity, RPA interaction with RMI1 is required for efficient dissolution, and MPS1 phosphorylation of RMI2 at Ser112 regulates spindle assembly checkpoint maintenance independent of BLM.

    Evidence Reconstituted in vitro resection/unwinding/dissolution assays with purified proteins; phospho-specific antibodies, S112A mutagenesis, rescue of RMI2-depleted cells, and cellular fractionation

    PMID:23543748 PMID:24108125 PMID:25200081

    Open questions at the time
    • How Ser112 phosphorylation mechanistically links to SAC signaling components was undefined
    • Whether resection stimulation is relevant in vivo was not tested
    • Direct structural role of RMI2 OB-fold in DNA binding during resection not determined
  3. 2016 High

    Loss-of-function analysis in patient-derived and CRISPR knockout cells demonstrated that RMI2 is required in vivo for BLM localization to ultrafine DNA bridges, suppression of sister chromatid exchanges, and prevention of anaphase bridges and micronuclei—phenocopying partial Bloom syndrome.

    Evidence Patient cells with homozygous RMI2 deletion, CRISPR knockout, SCE assays, immunofluorescence for BLM and FANCD2

    PMID:27977684

    Open questions at the time
    • Whether RMI2 loss causes the full clinical spectrum of Bloom syndrome was not established
    • Mechanism by which RMI2 promotes FANCD2 localization to bridges was not defined
    • Contribution of RMI2 to other DNA repair pathways beyond HR/dissolution not tested
  4. 2022 High

    Single-molecule studies revealed two new mechanistic functions: the TRR complex forms a size-adjustable ssDNA gate (~8.5 nm) capable of dsDNA strand passage, and TRR orients BLM to efficiently disrupt D-loops, establishing how the complex controls HR pathway choice at early recombination intermediates.

    Evidence Single-molecule optical tweezers, fluorescence microscopy, single-molecule FRET, and magnetic tweezers with purified TRR and BLM

    PMID:35102151 PMID:35115525

    Open questions at the time
    • Whether dsDNA passage through the gate occurs in vivo is unconfirmed
    • Structural basis of how TRR reorients BLM on D-loops not resolved
    • Role of RMI2 specifically vs. RMI1 in gate mechanics not dissected
  5. 2025 Medium

    Discovery of RAD54L2 as a BTRR-interacting SNF2-family ATPase revealed a new upstream regulator that promotes BLM chromatin recruitment and non-crossover recombination through its ATPase activity.

    Evidence BioID proximal proteomics, co-immunoprecipitation, ATPase domain mutagenesis, SCE assays, chromatin recruitment assays

    PMID:39870965

    Open questions at the time
    • Whether RAD54L2 contacts RMI2 directly or interacts via BLM is unknown
    • Single-lab finding not yet independently replicated
    • Mechanism by which ATPase activity facilitates BLM recruitment is undefined
  6. 2026 High

    Demonstration that the TRR complex processively relaxes negatively supercoiled DNA on a timescale compatible with PICH-generated supercoiling provided direct biophysical evidence supporting TRR's role in ultrafine anaphase bridge resolution.

    Evidence Single-molecule optical tweezers with fluorescence imaging and real-time supercoiling density measurement

    PMID:41576078

    Open questions at the time
    • How BLM and PICH coordinate with TRR processivity in vivo is not established
    • Whether processive relaxation requires RMI2 specifically or is driven by Topo IIIα catalysis alone is not dissected
    • Structural basis of stable post-relaxation DNA binding is unknown

Open questions

Synthesis pass · forward-looking unresolved questions
  • The individual structural and catalytic contributions of RMI2 within the TRR gate, its precise role in mitotic checkpoint signaling downstream of Ser112 phosphorylation, and whether RMI2 deficiency constitutes a bona fide Bloom syndrome spectrum disorder remain unresolved.
  • No high-resolution structure of the full BTRR complex on a DNA substrate
  • Downstream effectors of pSer112-RMI2 in SAC signaling unknown
  • Clinical significance of RMI2 mutations in human disease not fully defined

Mechanism profile

Synthesis pass · controlled-vocabulary classification · explore literature graph →
Molecular activity
GO:0005198 structural molecule activity 3 GO:0098772 molecular function regulator activity 2
Localization
GO:0005634 nucleus 2 GO:0005694 chromosome 2 GO:0005654 nucleoplasm 1
Pathway
R-HSA-73894 DNA Repair 4 R-HSA-1640170 Cell Cycle 2 R-HSA-69306 DNA Replication 2
Complex memberships
BLM-TOP3A-RMI1-RMI2 (BTRR/BTR dissolvasome)TOP3A-RMI1-RMI2 (TRR sub-complex)

Evidence

Reading pass · 10 per-paper findings extracted from the source corpus
Year Finding Method Journal Conf PMIDs
2008 RMI2 (BLAP18) was identified as a novel OB-fold-containing component of the BTR (BLM-Topo IIIα-RMI1-RMI2) dissolvasome complex. RMI2 co-purifies with Topo IIIα and RMI1, is required for stability of the BTR complex, targets BLM to chromatin, promotes BLM focus formation upon replication stress, and stimulates double Holliday junction (dHJ) dissolution activity of the BTR complex. Co-immunoprecipitation, protein depletion (siRNA), dHJ dissolution assays, chromatin fractionation, immunofluorescence microscopy Genes & development High 18923083
2013 The Topo IIIα-RMI1-RMI2 sub-complex stimulates BLM helicase-mediated DNA unwinding and is required for processivity of 5' DNA end resection in a reconstituted system with purified human proteins. Topo IIIα localizes to double-strand break ends, implicating it in recruitment of resection factors, and RMI1-RMI2 potentiate Topo IIIα's stimulatory effect on BLM. In vitro reconstitution with purified human proteins, DNA unwinding/resection assays, biochemical fractionation Nucleic acids research High 25200081
2013 RPA physically interacts with RMI1 within the BTR complex and stimulates BTR-mediated dHJ dissolution by sequestering single-stranded DNA intermediates. The RPA-interaction domain of RMI1 was mapped and RMI1 mutants impaired for RPA interaction showed defective dHJ dissolution. In vitro dHJ dissolution assays, co-immunoprecipitation, domain mapping, mutagenesis The Journal of biological chemistry High 23543748
2013 MPS1 kinase phosphorylates RMI2 at serine 112 upon spindle assembly checkpoint (SAC) activation during mitosis. The S112A phospho-dead mutant of RMI2 localizes normally and is incorporated into the BTR complex but fails to maintain mitotic arrest upon SAC activation, resulting in genomic instability (micronuclei, multiple nuclei, aberrant chromosome segregation). This phosphorylation regulates redistribution of RMI2 between nucleoplasm and nuclear matrix during mitosis and is independent of BLM. Phospho-specific antibodies, site-directed mutagenesis (S112A), complementation of RMI2-depleted cells, co-immunoprecipitation, immunofluorescence, cellular fractionation The Journal of biological chemistry High 24108125
2016 Loss of RMI2 in human cells results in elevated sister chromatid exchange, anaphase DNA bridges, and micronuclei, phenocopying a partial Bloom syndrome. RMI2 knockout reduces localization of BLM to ultrafine DNA bridges and reduces FANCD2 foci at bridges, demonstrating RMI2 is required for proper targeting of the BTR complex to these structures. Patient-derived cells with homozygous RMI2 deletion, CRISPR/RMI2 knockout cells, sister chromatid exchange assays, immunofluorescence for BLM and FANCD2 PLoS genetics High 27977684
2022 The human Topo IIIα-RMI1-RMI2 (TRR) complex forms an open ssDNA gate of 8.5 ± 3.8 nm. dsDNA binding to the open gate increases its size by ~16%, while BLM alters the mechanical flexibility of the gate. Direct visualization showed binding of a second ssDNA or dsDNA molecule to the open TRR-ssDNA gate followed by catenation, revealing unexpected plasticity in gate size and suggesting dsDNA transfer may be physiologically relevant. Single-molecule optical tweezers and fluorescence microscopy with purified TRR complex Nature communications High 35102151
2022 The Topo IIIα-RMI1-RMI2 complex orients BLM helicase for efficient disruption of D-loops (displacement loops), early HR intermediates. BLM alone shows a balance between D-loop stabilization and disruption, but the presence of Topo IIIα-RMI1-RMI2 markedly shifts this balance toward efficient D-loop disruption, establishing a mechanism for HR pathway regulation by the full complex. Single-molecule FRET, magnetic tweezers, and ensemble biochemical assays with purified proteins Nature communications High 35115525
2025 RAD54L2, a SNF2-family ATPase, physically interacts with BLM and suppresses sister chromatid exchanges. RAD54L2 is required for recruitment of BLM to chromatin and requires an intact ATPase domain to promote non-crossover recombination, placing RAD54L2 as a novel regulator of the BLM-TOP3A-RMI1-RMI2 (BTRR) complex. Proximity-dependent biotinylation (BioID) BTRR proximal proteome, co-immunoprecipitation, ATPase domain mutagenesis, sister chromatid exchange assays, BLM chromatin recruitment assays EMBO reports Medium 39870965
2024 During early mitosis, CDK1 destabilizes the BTRR (BLM/TOP3A/RMI1/RMI2) complex and suppresses its association with PICH at centromeric chromatin, protecting centromeres from inappropriate unwinding. MPS1-PLK1 axis phosphorylation of BLM at specific sites prevents BLM hyper-activation at centromeres; inactivating the BLM-TOP3A interaction compromises mitotic UFB-binding and prevents centromere destruction. Different clusters of mitotic phosphorylation on BLM differentially affect its interaction with the TOP3A/RMI1/RMI2 subcomplex. Phospho-site mutagenesis, kinase inhibitors, co-immunoprecipitation, live-cell imaging, chromatin fractionation bioRxivpreprint Medium bio_10.1101_2024.05.21.595148
2026 The TRR (Topo IIIα-RMI1-RMI2) complex relaxes negatively supercoiled DNA in a processive manner at the single-molecule level. The timescale of relaxation is shorter than the expected lifetime of negatively supercoiled loops generated by the PICH translocase, supporting TRR's proposed role in ultrafine anaphase bridge (UFB) resolution. After relaxation, TRR remains stably bound to DNA. Single-molecule optical tweezers combined with fluorescence imaging, real-time supercoiling density measurement Proceedings of the National Academy of Sciences of the United States of America High 41576078

Source papers

Stage 0 corpus · 13 papers · ranked by NIH iCite citations
Year Title Journal Citations PMID
2008 BLAP18/RMI2, a novel OB-fold-containing protein, is an essential component of the Bloom helicase-double Holliday junction dissolvasome. Genes & development 180 18923083
2014 Multifaceted role of the Topo IIIα-RMI1-RMI2 complex and DNA2 in the BLM-dependent pathway of DNA break end resection. Nucleic acids research 65 25200081
2016 Loss of RMI2 Increases Genome Instability and Causes a Bloom-Like Syndrome. PLoS genetics 45 27977684
2013 Role of replication protein A in double holliday junction dissolution mediated by the BLM-Topo IIIα-RMI1-RMI2 protein complex. The Journal of biological chemistry 37 23543748
2016 The RTR Complex Partner RMI2 and the DNA Helicase RTEL1 Are Both Independently Involved in Preserving the Stability of 45S rDNA Repeats in Arabidopsis thaliana. PLoS genetics 28 27760121
2022 Duplex DNA and BLM regulate gate opening by the human TopoIIIα-RMI1-RMI2 complex. Nature communications 15 35102151
2022 The toposiomerase IIIalpha-RMI1-RMI2 complex orients human Bloom's syndrome helicase for efficient disruption of D-loops. Nature communications 12 35115525
2013 Monopolar spindle 1 (MPS1) protein-dependent phosphorylation of RecQ-mediated genome instability protein 2 (RMI2) at serine 112 is essential for BLM-Topo III α-RMI1-RMI2 (BTR) protein complex function upon spindle assembly checkpoint (SAC) activation during mitosis. The Journal of biological chemistry 10 24108125
2023 A combined bioinformatics and experimental approach identifies RMI2 as a Wnt/β-catenin signaling target gene related to hepatocellular carcinoma. BMC cancer 7 37875822
2021 Caenorhabditis elegans RMI2 functional homolog-2 (RMIF-2) and RMI1 (RMH-1) have both overlapping and distinct meiotic functions within the BTR complex. PLoS genetics 6 34252074
2025 The BLM-TOP3A-RMI1-RMI2 proximity map reveals that RAD54L2 suppresses sister chromatid exchanges. EMBO reports 2 39870965
2021 The Clinical Significance of RMI2 in Hepatocellular Carcinoma. Technology in cancer research & treatment 2 34634948
2026 Mechanistic basis for relaxation of DNA supercoils by human topoisomerase IIIα-RMI1-RMI2. Proceedings of the National Academy of Sciences of the United States of America 0 41576078