Affinage

RMI2

RecQ-mediated genome instability protein 2 · UniProt Q96E14

Length
147 aa
Mass
15.9 kDa
Annotated
2026-06-10
12 papers in source corpus 10 papers cited in narrative 10 extracted findings
Cross-family judge vs UniProt: Affinage preferred faithfulness: 6/6 claims corpus-supported (100%)

Mechanistic narrative

Synthesis pass · prose summary of the discoveries below

RMI2 (BLAP18) is an OB-fold-containing scaffold subunit of the conserved BLM-Topoisomerase IIIα-RMI1-RMI2 (BTRR/dissolvasome) complex that governs the resolution of recombination and replication intermediates to enforce genome stability (PMID:18923083). The majority of cellular RMI2 exists in complex with Topo IIIα and RMI1, and its depletion destabilizes the complex, abolishes chromatin targeting of BLM, prevents BLM focus assembly under replication stress, and reduces double Holliday junction dissolution (PMID:18923083). Within the reconstituted complex RMI2 acts together with RMI1 to potentiate Topo IIIα-driven stimulation of BLM, conferring processivity on BLM-mediated 5′ DNA end resection (PMID:25200081), and the Topo IIIα-RMI1-RMI2 (TRR) subcomplex orients BLM to favor D-loop disruption over stabilization, providing quality control over the homologous recombination pathway toward non-crossover outcomes (PMID:35115525). Single-molecule analyses show TRR forms an open ssDNA gate whose mechanical size is modulated by dsDNA binding and by BLM, and that TRR processively relaxes highly negatively supercoiled DNA while remaining stably bound, supplying a mechanistic basis for resolving ultrafine anaphase bridges (PMID:35102151, PMID:41576078). Consistent with these biochemical roles, loss of RMI2 in human cells elevates sister chromatid exchange and produces anaphase DNA bridges and micronuclei, with impaired BLM and FANCD2 localization to ultrafine bridges (PMID:27977684). Separately from its dissolvasome function, MPS1 kinase phosphorylates RMI2 at serine 112 upon spindle assembly checkpoint activation, redirecting the complex between nucleoplasm and nuclear matrix to maintain mitotic arrest and prevent chromosomal instability, independent of BLM and of complex stability (PMID:24108125).

Mechanistic history

Synthesis pass · year-by-year structured walk · 8 steps
  1. 2008 High

    Established RMI2 as an essential structural subunit of the BLM dissolvasome, answering whether the newly identified OB-fold protein had a defined role in the complex.

    Evidence Co-IP, siRNA depletion, chromatin fractionation, and in vitro dHJ dissolution assay in human cells

    PMID:18923083

    Open questions at the time
    • Did not resolve which contacts within the complex RMI2 mediates
    • Quantitative contribution of RMI2 to dissolution versus chromatin targeting not separated
  2. 2013 High

    Defined a biochemical role for RMI2 beyond complex integrity, showing it potentiates BLM unwinding and resection processivity rather than merely scaffolding.

    Evidence In vitro reconstitution with purified human proteins and DNA unwinding/resection assays

    PMID:25200081

    Open questions at the time
    • Single lab
    • Did not isolate RMI2-specific contribution from RMI1 within the RMI1-RMI2 pair
  3. 2013 Medium

    Uncovered a mitosis-specific, dissolvasome-independent function for RMI2 as an MPS1 phosphorylation substrate maintaining the spindle assembly checkpoint.

    Evidence Phospho-specific analysis, S112A mutagenesis, reciprocal Co-IP, and cellular phenotype assays

    PMID:24108125

    Open questions at the time
    • Mechanism of nucleoplasm/nuclear-matrix redistribution unresolved
    • Direct MPS1-RMI2 kinase-substrate relationship in vitro not fully reconstituted
  4. 2016 High

    Confirmed the physiological requirement for RMI2 in genome maintenance using human null models, linking biochemistry to cellular phenotypes at replication intermediates.

    Evidence Patient-derived and CRISPR RMI2-knockout cells, sister chromatid exchange assays, immunofluorescence

    PMID:27977684

    Open questions at the time
    • Whether RMI2 loss phenotypes are fully accounted for by BLM mislocalization not established
    • No structural basis for ultrafine-bridge localization defect
  5. 2021 Medium

    Extended RMI2 function to meiosis via its ortholog, showing conserved BTR-complex interdependence and roles in crossover control.

    Evidence C. elegans rmif-2 genetics, immunofluorescence, and mutant epistasis with HIM-6/BLM, TOP-3, RMH-1

    PMID:34252074

    Open questions at the time
    • Ortholog-based; human meiotic role not directly tested
    • Molecular basis of mutual localization dependence not defined
  6. 2022 High

    Provided a mechanistic basis for how the complex enforces non-crossover recombination by reorienting BLM activity and defining the topoisomerase gate.

    Evidence Single-molecule FRET, optical tweezers, and D-loop disruption assays with purified TRR and BLM

    PMID:35102151 PMID:35115525

    Open questions at the time
    • RMI2-specific contribution to gate plasticity versus Topo IIIα/RMI1 not isolated
    • Structural model of the gate in its active state not resolved
  7. 2025 Medium

    Expanded the dissolvasome interaction network, identifying RAD54L2 as a BTRR-proximal factor aiding BLM recruitment and non-crossover recombination.

    Evidence BioID proximity proteomics of BTRR, Co-IP, SCE assays, and ATPase-dead RAD54L2 mutant

    PMID:39870965

    Open questions at the time
    • Finding centers on RAD54L2; direct RMI2-RAD54L2 contact not shown
    • Whether RAD54L2 acts through RMI2 specifically is unknown
  8. 2026 High

    Demonstrated processive supercoil relaxation and stable DNA retention by TRR, linking the topoisomerase mechanism to ultrafine anaphase bridge resolution.

    Evidence Single-molecule optical tweezers with fluorescence imaging and real-time supercoiling measurement

    PMID:41576078

    Open questions at the time
    • RMI2-specific role in processivity not dissected from the complex
    • In-cell relevance to UFB resolution inferred, not directly observed

Open questions

Synthesis pass · forward-looking unresolved questions
  • How RMI2's two roles — dissolvasome scaffolding and MPS1-dependent checkpoint maintenance — are coordinated, and the structural basis of its specific contacts within the complex, remain unresolved.
  • No structure isolating RMI2 interfaces within BTRR
  • Coupling between mitotic phosphorylation and dissolvasome function undefined

Mechanism profile

Synthesis pass · controlled-vocabulary classification · explore literature graph →
Molecular activity
GO:0003677 DNA binding 2 GO:0098772 molecular function regulator activity 2 GO:0005198 structural molecule activity 1
Localization
GO:0005634 nucleus 2 GO:0005694 chromosome 2 GO:0005654 nucleoplasm 1
Pathway
R-HSA-1640170 Cell Cycle 3 R-HSA-73894 DNA Repair 3
Complex memberships
BLM-Topo IIIα-RMI1-RMI2 dissolvasome (BTRR/BTR)

Evidence

Reading pass · 10 per-paper findings extracted from the source corpus
Year Finding Method Journal Conf PMIDs
2008 BLAP18/RMI2 contains a putative OB-fold domain and is an essential component of the BTB (BLM-Topo IIIα-RMI1) complex; the majority of RMI2 exists in complex with Topo IIIα and RMI1, and depletion of RMI2 destabilizes the BTB complex, abolishes chromatin targeting of BLM, prevents BLM focus assembly upon hydroxyurea treatment, and reduces the double Holliday junction (dHJ) dissolution capability of the complex. Co-immunoprecipitation, siRNA depletion, chromatin fractionation, immunofluorescence, in vitro dHJ dissolution assay Genes & development High 18923083
2013 The Topo IIIα-RMI1-RMI2 complex is required for processivity of BLM-mediated 5′ DNA end resection; RMI1-RMI2 potentiates stimulation of BLM DNA unwinding by Topo IIIα in a reconstituted system with purified human proteins. In vitro reconstitution with purified human proteins, DNA unwinding/resection assays The Journal of biological chemistry High 25200081
2013 MPS1 kinase phosphorylates RMI2 at serine 112 upon spindle assembly checkpoint (SAC) activation during mitosis; the S112A mutant of RMI2 fails to maintain mitotic arrest, causes redistribution defects between nucleoplasm and nuclear matrix, and results in genomic instability (micronuclei, multiple nuclei, aberrant chromosome segregation), while phosphorylation at S112 is independent of BLM and not required for BTR complex stability or BLM focus formation under replication stress. Phospho-specific analysis, site-directed mutagenesis (S112A), coimmunoprecipitation, immunofluorescence, cellular phenotype assays The Journal of biological chemistry Medium 24108125
2016 Loss of RMI2 in human cells (patient-derived and CRISPR knockout) results in elevated sister chromatid exchange, anaphase DNA bridges, and micronuclei, and reduces localization of BLM to ultrafine DNA bridges and FANCD2 at foci linking bridges, indicating that RMI2 is required for full BLM complex function at replication intermediates. RMI2 knockout cells (patient-derived homozygous deletion and independently generated KO), sister chromatid exchange assay, immunofluorescence PLoS genetics High 27977684
2022 The Topo IIIα-RMI1-RMI2 (TRR) complex forms an open ssDNA gate of 8.5 ± 3.8 nm; dsDNA binding to the open gate increases its size by ~16%, and BLM alters the mechanical flexibility of the gate, revealing plasticity of the TRR-ssDNA gate mechanism. Single-molecule optical tweezers, fluorescence microscopy Nature communications High 35102151
2022 The Topo IIIα-RMI1-RMI2 (TRR) complex orients BLM helicase for efficient D-loop disruption; presence of TRR markedly shifts BLM activity from D-loop stabilization toward efficient D-loop disruption, providing a mechanism for HR pathway quality control. Single-molecule FRET, biochemical D-loop disruption assays with purified proteins Nature communications High 35115525
2025 RAD54L2, a SNF2-family protein, physically interacts with BLM and is revealed by a BLM-TOP3A-RMI1-RMI2 (BTRR) proximity proteome map; RAD54L2 requires an intact ATPase domain to promote non-crossover recombination and is important for BLM recruitment to chromatin. BioID proximity proteomics of the BTRR complex, co-immunoprecipitation, sister chromatid exchange assays, ATPase domain mutant EMBO reports Medium 39870965
2026 The Topo IIIα-RMI1-RMI2 (TRR) complex relaxes highly negatively supercoiled DNA in a processive manner using a single-molecule approach; TRR remains stably bound to DNA after torsional stress is released, providing a mechanistic basis for TRR's role in ultrafine anaphase bridge (UFB) resolution. Single-molecule optical tweezers combined with fluorescence imaging, real-time supercoiling density measurement Proceedings of the National Academy of Sciences of the United States of America High 41576078
2021 In C. elegans, the RMI2 functional homolog RMIF-2 shows dynamic localization to meiotic recombination foci in a manner mutually dependent on other BTR complex proteins (HIM-6/BLM, TOP-3, RMH-1), and is required for crossover distribution and suppression of heterologous recombination during meiosis. C. elegans genetics, immunofluorescence localization, rmif-2 and rmh-1 mutant phenotype comparison PLoS genetics Medium 34252074
2023 The β-catenin/TCF complex binds to a TCF binding site at −333/−326 of the RMI2 promoter, driving RMI2 transcription as a Wnt/β-catenin target gene in hepatic cell lines. Chromatin immunoprecipitation (ChIP) assay, luciferase reporter assay with promoter deletions BMC cancer Medium 37875822

Source papers

Stage 0 corpus · 12 papers · ranked by NIH iCite citations
Year Title Journal Citations PMID
2008 BLAP18/RMI2, a novel OB-fold-containing protein, is an essential component of the Bloom helicase-double Holliday junction dissolvasome. Genes & development 180 18923083
2014 Multifaceted role of the Topo IIIα-RMI1-RMI2 complex and DNA2 in the BLM-dependent pathway of DNA break end resection. Nucleic acids research 65 25200081
2016 Loss of RMI2 Increases Genome Instability and Causes a Bloom-Like Syndrome. PLoS genetics 46 27977684
2013 Role of replication protein A in double holliday junction dissolution mediated by the BLM-Topo IIIα-RMI1-RMI2 protein complex. The Journal of biological chemistry 38 23543748
2022 Duplex DNA and BLM regulate gate opening by the human TopoIIIα-RMI1-RMI2 complex. Nature communications 16 35102151
2022 The toposiomerase IIIalpha-RMI1-RMI2 complex orients human Bloom's syndrome helicase for efficient disruption of D-loops. Nature communications 12 35115525
2013 Monopolar spindle 1 (MPS1) protein-dependent phosphorylation of RecQ-mediated genome instability protein 2 (RMI2) at serine 112 is essential for BLM-Topo III α-RMI1-RMI2 (BTR) protein complex function upon spindle assembly checkpoint (SAC) activation during mitosis. The Journal of biological chemistry 10 24108125
2023 A combined bioinformatics and experimental approach identifies RMI2 as a Wnt/β-catenin signaling target gene related to hepatocellular carcinoma. BMC cancer 7 37875822
2021 Caenorhabditis elegans RMI2 functional homolog-2 (RMIF-2) and RMI1 (RMH-1) have both overlapping and distinct meiotic functions within the BTR complex. PLoS genetics 7 34252074
2025 The BLM-TOP3A-RMI1-RMI2 proximity map reveals that RAD54L2 suppresses sister chromatid exchanges. EMBO reports 2 39870965
2021 The Clinical Significance of RMI2 in Hepatocellular Carcinoma. Technology in cancer research & treatment 2 34634948
2026 Mechanistic basis for relaxation of DNA supercoils by human topoisomerase IIIα-RMI1-RMI2. Proceedings of the National Academy of Sciences of the United States of America 0 41576078

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