Affinage

RCBTB2

RCC1 and BTB domain-containing protein 2 · UniProt O95199

Length
551 aa
Mass
60.3 kDa
Annotated
2026-06-10
12 papers in source corpus 7 papers cited in narrative 8 extracted findings
Cross-family judge faithfulness: 4/4 claims corpus-supported (100%)

Mechanistic narrative

Synthesis pass · prose summary of the discoveries below

RCBTB2 (CHC1L) is a multi-domain protein that combines an N-terminal RCC1-like seven-bladed repeat region with a C-terminal BTB domain, acting both as a regulator of microtubule-organizing-center function and as a tumor suppressor (PMID:9806834, PMID:26291700). Through its BTB domain it is directed to vesicular and perinuclear compartments, and it localizes to Golgi bodies and centrosomes where it is required for primary cilium formation: loss of RCBTB2 reduces ciliogenesis and shortens cilia, a defect reversed by re-expression, consistent with a role in cargo transport from Golgi to centrosome (PMID:22768142, PMID:25762510). RCBTB2 functions as a ubiquitin ligase, directly binding GPAA1 and driving its ubiquitin-mediated proteasomal degradation, and its overexpression suppresses prostate cancer cell proliferation, migration, invasion, epithelial-mesenchymal transition, and xenograft growth (PMID:41244118). Consistent with a tumor-suppressive role, Chc1L-knockout mice develop histiocytic sarcoma, and reduced expression of its 551-amino-acid isoform is seen in prostate cancer (PMID:12115502, PMID:26291700). The catalytic basis of its inferred RCC1-like GEF activity has not been directly demonstrated in the available corpus.

Mechanistic history

Synthesis pass · year-by-year structured walk · 8 steps
  1. 1998 Medium

    Establishing the gene's domain architecture answered what protein family RCBTB2 belongs to, predicting a guanine-nucleotide-exchange-related function from its RCC1 homology.

    Evidence cDNA cloning, genomic characterization, and sequence homology analysis mapping the gene to 13q14.3

    PMID:9806834

    Open questions at the time
    • GEF activity inferred from homology, never demonstrated biochemically
    • No substrate GTPase identified
    • Function of the C-terminal region not addressed
  2. 2002 Medium

    Isoform-resolved expression profiling addressed which RCBTB2 product is dysregulated in cancer, linking specific loss of the 551 aa isoform to prostate tumors.

    Evidence Quantitative RT-PCR isoform analysis in primary prostate tumors vs. normal tissue

    PMID:12115502

    Open questions at the time
    • Correlation only; no causal mechanism for tumor suppression shown
    • Functional difference between the 551 and 526 aa isoforms unknown
  3. 2012 Medium

    Domain-dissection localization studies answered how RCBTB2 is targeted within the cell, showing the BTB domain rather than the RCC1 region directs subcellular localization, and placed the protein at the acrosome during spermatogenesis.

    Evidence Immunofluorescence co-localization with acrosomal markers and GFP-tagged domain constructs in transfected CHO cells

    PMID:22768142

    Open questions at the time
    • Molecular basis of BTB-mediated targeting not defined
    • Acrosomal function not tested by loss-of-function
    • Done in mouse ortholog and CHO cells
  4. 2015 High

    Loss-of-function with rescue answered whether RCBTB2 has a cellular role at the centrosome, establishing it as a necessary component of primary cilium formation.

    Evidence Stable shRNA knockdown, Golgi/centrosome immunolocalization, cilia length measurement, and rescue by re-expression in NIH3T3 and IMCD3 cells

    PMID:25762510

    Open questions at the time
    • Proposed Golgi-to-centrosome cargo transport mechanism not directly demonstrated
    • No identified ciliary cargo or transport machinery partner
  5. 2015 High

    A whole-animal knockout addressed whether RCBTB2 is a tumor suppressor in vivo, demonstrating that its loss drives histiocyte proliferation and neoplasia.

    Evidence Chc1L knockout mouse with histopathology and ex vivo proliferation assays of bone marrow and spleen cells

    PMID:26291700

    Open questions at the time
    • Molecular pathway linking loss to histiocyte proliferation not defined
    • Tumor-suppressor mechanism not connected to ciliary or ubiquitin functions
  6. 2015 Low

    A reported interaction placed RCBTB2 in a spermiogenesis signaling pathway, naming SPAG16S as a partner relevant to flagella and cilia formation.

    Evidence Binding-partner identification cited within the ciliogenesis study

    PMID:25762510

    Open questions at the time
    • Specific binding assay not detailed; single reference point
    • Functional consequence of the interaction not tested
    • No reciprocal validation
  7. 2023 Low

    Tumor-versus-normal localization scoring addressed where RCBTB2 normally acts, indicating predominantly nuclear localization that is lost with plasma-membrane mislocalization in oral squamous cell carcinoma.

    Evidence Quantitative immunohistochemical subcellular localization scoring in OSCC vs. normal oral mucosa

    PMID:37311552

    Open questions at the time
    • Descriptive IHC only; no functional consequence demonstrated
    • Nuclear function of RCBTB2 not characterized
    • Inconsistent with Golgi/centrosome localization reported elsewhere; not reconciled
  8. 2025 High

    Identification of an enzymatic activity and substrate answered how RCBTB2 suppresses tumor progression at the molecular level, showing it is a ubiquitin ligase that degrades GPAA1.

    Evidence RCBTB2 overexpression, Co-IP, co-localization, protein-but-not-mRNA downregulation of GPAA1, proliferation/migration/invasion assays, GPAA1 knockdown, and a nude-mouse xenograft model

    PMID:41244118

    Open questions at the time
    • E3 ligase catalytic machinery and ubiquitination site not defined
    • Relationship between ligase activity and the RCC1/BTB domains unresolved
    • Connection to ciliary and tumor-suppressor phenotypes not integrated

Open questions

Synthesis pass · forward-looking unresolved questions
  • How RCBTB2's distinct activities — RCC1-like domain, BTB-mediated localization, ciliogenesis, and GPAA1-directed ubiquitin ligase function — mechanistically integrate into a single tumor-suppressive program remains unresolved.
  • No direct demonstration of RCC1-like GEF activity or a target GTPase
  • Structural basis of substrate recognition by the ligase unknown
  • Conflicting subcellular localization reports (nuclear vs. Golgi/centrosome) not reconciled

Mechanism profile

Synthesis pass · controlled-vocabulary classification · explore literature graph →
Molecular activity
GO:0016874 ligase activity 1 GO:0140096 catalytic activity, acting on a protein 1
Localization
GO:0005794 Golgi apparatus 1 GO:0005815 microtubule organizing center 1 GO:0005929 cilium 1
Pathway
R-HSA-1852241 Organelle biogenesis and maintenance 1 R-HSA-392499 Metabolism of proteins 1
Partners

Evidence

Reading pass · 8 per-paper findings extracted from the source corpus
Year Finding Method Journal Conf PMIDs
1998 CHC1L (RCBTB2) encodes a ubiquitously expressed protein with an N-terminal half showing strong homology to the seven tandem repeat structure of RCC1, a guanine nucleotide exchange factor (GEF) for the Ras-related GTPase Ran, classifying it as a new member of the RCC1-related GEF family. The gene spans 30 kb, comprises 14 exons, and maps to chromosome 13q14.3. cDNA cloning, genomic characterization, sequence homology analysis Genomics Medium 9806834
2002 CHC1L (RCBTB2) is alternatively spliced at its 5' end to produce two protein isoforms of 551 and 526 amino acids. In prostate cancer, reduced expression is specifically attributable to decreased levels of the 551 aa isoform. Quantitative real-time RT-PCR, isoform expression analysis in primary prostate tumors vs. normal tissue International journal of cancer Medium 12115502
2012 Mouse RC/BTB2 (RCBTB2 ortholog) contains three RCC1 domains in the N-terminus and a BTB domain in the C-terminus. In spermatids, RC/BTB2 co-localizes with acrosomal markers sp56 and peanut lectin, identifying it as an acrosomal protein. In transfected CHO cells, a GFP-tagged full-length RC/BTB2 and a GFP-tagged BTB domain localize to vesicles near the nuclear membrane, whereas the isolated RCC1 domain distributes throughout the cytoplasm, indicating the BTB domain mediates subcellular localization of the full-length protein. Immunofluorescence co-localization with acrosomal markers, GFP-tagged domain constructs in transfected CHO cells, Western blot during spermatogenesis time course PloS one Medium 22768142
2015 RC/BTB2 (RCBTB2) localizes to Golgi bodies and centrosomes in NIH3T3 and IMCD3 cells. Stable shRNA-mediated knockdown of Rc/btb2 significantly reduces the percentage of cells forming primary cilia and shortens cilia length. Exogenous re-expression of RC/BTB2 in knockdown cells restores ciliogenesis, establishing RC/BTB2 as a necessary component of primary cilia formation, potentially through cargo transport from Golgi to centrosomes. Stable shRNA knockdown, immunofluorescence localization, cilia length measurement, rescue by exogenous expression in NIH3T3 and IMCD3 cell lines Cytoskeleton (Hoboken, N.J.) High 25762510
2015 Chc1L knockout mice show an exaggerated proliferative response in bone marrow and spleen cells and develop histiocytic sarcoma or histiocyte-associated lymphoma by approximately two years of age, demonstrating that Chc1L functions as a tumor suppressor for histiocyte-rich neoplasms in vivo. Chc1L knockout mouse generation, histopathological analysis, ex vivo proliferation assay of bone marrow and spleen cells PloS one High 26291700
2015 RC/BTB2 (RCBTB2) is a binding partner of SPAG16S (sperm associated antigen 16S), a regulator of spermiogenesis, placing RC/BTB2 in the SPAG16S-dependent pathway of flagella and cilia formation. Protein-protein interaction (binding partner identification, cited as established prior to the 2015 ciliogenesis study) Cytoskeleton (Hoboken, N.J.) Low 25762510
2025 RCBTB2 functions as a ubiquitin ligase that directly interacts with GPAA1 and promotes its ubiquitin-mediated proteasomal degradation (GPAA1 protein is downregulated without changes in mRNA levels upon RCBTB2 overexpression). RCBTB2 overexpression inhibits DU145 prostate cancer cell proliferation, migration, invasion, and epithelial-mesenchymal transition, and reduces xenograft tumor growth. GPAA1 knockdown recapitulates these phenotypes and reduces expression of aggrephagy-related factors such as p62. RCBTB2 overexpression cell line, co-immunoprecipitation, immunofluorescence co-localization, CCK-8 proliferation assay, scratch/Transwell migration-invasion assay, nude mouse xenograft model, GPAA1 knockdown, multi-omics analysis American journal of cancer research High 41244118
2023 In normal oral mucosa, CHC1L (RCBTB2) protein displays predominantly nuclear localization. In oral squamous cell carcinoma, CHC1L protein undergoes subcellular mislocalization with significantly increased plasma membrane staining and reduced nuclear staining, suggesting dysregulation of its normal nuclear function in malignancy. Immunohistochemistry with quantitative subcellular localization scoring in OSCC vs. normal oral mucosa specimens European journal of dentistry Low 37311552

Source papers

Stage 0 corpus · 12 papers · ranked by NIH iCite citations
Year Title Journal Citations PMID
2008 Low expression of ZHX2, but not RCBTB2 or RAN, is associated with poor outcome in multiple myeloma. British journal of haematology 30 18353163
2002 CHC1-L, a candidate gene for prostate carcinogenesis at 13q14.2, is frequently affected by loss of heterozygosity and underexpressed in human prostate cancer. International journal of cancer 23 12115502
1998 cDNA cloning, gene characterization and 13q14.3 chromosomal assignment of CHC1-L, a chromosome condensation regulator-like guanine nucleotide exchange factor. Genomics 19 9806834
2010 Expression of RAN, ZHX-2, and CHC1L genes in multiple myeloma patients and in myeloma cell lines treated with HDAC and Dnmts inhibitors. Neoplasma 13 20568903
2003 A culture device demonstrates that hydrostatic pressure increases mRNA of RGS5 in neuroblastoma and CHC1-L in lymphocytic cells. Cells, tissues, organs 13 14504426
2015 RC/BTB2 is essential for formation of primary cilia in mammalian cells. Cytoskeleton (Hoboken, N.J.) 6 25762510
2012 Mouse RC/BTB2, a member of the RCC1 superfamily, localizes to spermatid acrosomal vesicles. PloS one 5 22768142
2015 Chromosome Condensation 1-Like (Chc1L) Is a Novel Tumor Suppressor Involved in Development of Histiocyte-Rich Neoplasms. PloS one 2 26291700
2024 Familial 46, XY Disorder of Sexual Development identified in a Ph+BCR::ABL1 Acute Lymphoblastic Leukemia septuagenarian female with RCBTB2::LPAR6 fusion gene: a case report. Frontiers in oncology 1 39091920
2023 Preliminary Study on the Expression of CLLD7 and CHC1L Proteins in Oral Squamous Cell Carcinoma. European journal of dentistry 1 37311552
2025 The ubiquitin ligase RCBTB2 regulates aggrephagy and inhibits prostate cancer progression by targeting GPAA1 for degradation. American journal of cancer research 0 41244118
2024 Expression of CLLD7 and CHC1L Proteins in Oral Epithelial Dysplasia in a Group of Thai Patients. Asian Pacific journal of cancer prevention : APJCP 0 38679985

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