| 1994 |
Phosphacan (the extracellular domain of PTPRZ1/RPTPζ/β) binds with high affinity (Kd ~0.1 nM) to neural cell adhesion molecules N-CAM and Ng-CAM/L1 via its core glycoprotein (not chondroitin sulfate chains), and inhibits neuronal adhesion and neurite outgrowth when neurons are incubated on dishes co-coated with phosphacan and Ng-CAM. |
Radioligand binding assay (125I-phosphacan), Scatchard analysis, chondroitinase treatment, antibody inhibition, neurite outgrowth assay |
The Journal of cell biology |
High |
7528221
|
| 1994 |
Phosphacan represents an mRNA splicing variant encoding the entire extracellular portion of the transmembrane receptor-type protein tyrosine phosphatase RPTP zeta/beta (PTPRZ1), established by cDNA cloning and peptide sequencing showing 76% identity to human RPTP zeta/beta extracellular domain; the N-terminal domain is homologous to carbonic anhydrases. |
cDNA cloning, peptide sequencing (CNBr, tryptic, endoproteinase Lys-C fragments), RNA analysis with domain-specific probes |
Proceedings of the National Academy of Sciences of the United States of America |
High |
7511813
|
| 1994 |
Phosphacan (PTPRZ1 extracellular domain) binds specifically and with high affinity to tenascin-C via the core glycoprotein (not chondroitin sulfate chains), as demonstrated by bead co-aggregation and solid-phase radioligand binding, and inhibits C6 glioma cell adhesion to tenascin. |
Fluorescent microbead co-aggregation, solid-phase radioligand binding, Scatchard analysis, chondroitinase treatment, Fab' antibody inhibition, cell adhesion assay |
The Journal of biological chemistry |
High |
7512960
|
| 1995 |
The interactions of phosphacan/PTPRZ1 with neural cell adhesion molecules (Ng-CAM/L1, N-CAM) and tenascin are mediated by asparagine-linked complex-type oligosaccharides located in the carbonic anhydrase-like and fibronectin type III-like domains (at Asn-232 and Asn-381), rather than by the proteoglycan chains. |
Tryptic digest radioligand binding, peptide N-glycosidase F treatment under non-denaturing conditions, endo-β-N-acetylglucosaminidase H treatment, size analysis of glycopeptides |
The Journal of biological chemistry |
High |
7559574
|
| 1996 |
6B4 proteoglycan/phosphacan (PTPRZ1 extracellular domain) binds pleiotrophin/HB-GAM with high affinity (Kd = 0.25 nM high-affinity site, 3 nM low-affinity site); chondroitin sulfate chains mediate differential binding affinities, and heparin potently inhibits binding (IC50 = 3.5 ng/ml). Anti-6B4 antibody added to cortical neuron cultures suppressed pleiotrophin-induced neurite outgrowth, indicating the interaction is required for pleiotrophin action. |
Affinity chromatography purification, N-terminal amino acid sequencing, Scatchard analysis, chondroitinase ABC digestion, heparin competition assay, neurite outgrowth assay with antibody blockade |
The Journal of biological chemistry |
High |
8702927
|
| 1996 |
Phosphacan/PTPRZ1 adsorbed as substrate exerts repulsive effects on cortical and thalamic neurons, preventing adhesion, but when sparsely seeded on poly-L-lysine co-coated with phosphacan it promotes neurite outgrowth and dendrite development of cortical neurons (not thalamic neurons) through a protein moiety (chondroitinase- and keratanase-resistant activity); this effect correlates with transient tyrosine phosphorylation of an 85 kDa protein in cortical neurons. |
Stripe/pattern substrate assay, chondroitinase/keratanase treatment, antibody neutralization, Western blot for tyrosine phosphorylation |
Development (Cambridge, England) |
High |
8625816
|
| 1996 |
Phosphacan/PTPRZ1 binds TAG-1/axonin-1 with very high affinity (Kd ~0.04 nM); approximately 70% of binding is mediated by chondroitin sulfate chains (opposite to binding of Ng-CAM/L1 and N-CAM where core protein dominates); N-deglycosylation does not affect binding to TAG-1. |
Radioligand binding assay, chondroitinase treatment, N-deglycosylation, Scatchard analysis |
The Journal of biological chemistry |
High |
8663515
|
| 1997 |
Phosphacan/PTPRZ1 binds to the fibrinogen-like globe of tenascin-C (Kd ~12 nM for this single domain, nearly same as native tenascin-C); binding is calcium-dependent and mediated by the proteoglycan core protein rather than glycosaminoglycan chains; rotary shadowing EM shows phosphacan apposed to the fibrinogen globe. |
Recombinant tenascin-C deletion variants, radioligand binding, inhibition studies, calcium chelation, chondroitinase treatment, rotary shadowing electron microscopy |
The Journal of biological chemistry |
High |
9182584
|
| 1998 |
Phosphacan/PTPRZ1 binds tenascin-R with high affinity (Kd 2–7 nM) via its core glycoprotein, and also binds amphoterin and HB-GAM (Kd 0.3–8 nM) predominantly through its chondroitin sulfate chains (>80% of binding); amphoterin increases phosphacan binding to contactin 5-fold. |
Radioligand binding assay, chondroitinase treatment, calcium chelation, Scatchard analysis |
The Journal of biological chemistry |
High |
9507007
|
| 1998 |
Phosphacan/PTPRZ1 core protein (not chondroitin sulfate chains) binds fibroblast growth factor-2 (FGF-2) with high affinity (Kd ~6 nM) and potentiates FGF-2 mitogenic activity on NIH/3T3 cells by 75–90%, comparable to heparin. |
Radioligand binding assay, chondroitinase treatment, Scatchard analysis, [3H]thymidine incorporation mitogenic assay |
The Journal of biological chemistry |
High |
9705269
|
| 2003 |
The chondroitin sulfate heterogeneity on phosphacan/PTPRZ1 regulates binding affinity for pleiotrophin: adult brain phosphacan containing the D unit (GlcA(2S)-GalNAc(6S)) binds pleiotrophin ~5-fold more strongly (KD = 0.14 nM) than postnatal phosphacan lacking D units (KD ~1.5 nM); chondroitinase treatment abolishes this difference. |
Surface plasmon resonance biosensor, chondroitinase ABC digestion, immunochemical characterization of CS disaccharide composition |
The Journal of biological chemistry |
High |
12840014
|
| 2003 |
A novel truncated isoform of PTPRZ1 (phosphacan short isoform, PSI), corresponding to N-terminal carbonic anhydrase- and fibronectin type III-like domains, is expressed in the CNS and can interact with Ig-CAMs F3/contactin and L1, and promotes neurite outgrowth of cortical neurons as a coated substrate; PSI is not a proteoglycan (lacks GAG chains) but carries HNK-1 oligosaccharides. |
cDNA library screening, Northern blot, Western blot with N-terminal sequencing, co-immunoprecipitation/binding assays with F3/contactin and L1, neurite outgrowth assay |
The Journal of biological chemistry |
High |
12700241
|
| 2007 |
PTPRZ1 (RPTPβ/ζ) forms a functional complex with ERBB4 bridged by MAGI scaffolding proteins: MAGI interacts with both ERBB4 and RPTPβ; ERBB4 expression leads to tyrosine phosphorylation of MAGI proteins that is enhanced by neuregulin, and RPTPβ shows spatial and functional association with ERBB4/MAGI in cultured cells. |
Yeast two-hybrid, co-immunoprecipitation in mammalian cells, tyrosine phosphorylation assay, neuregulin stimulation |
Molecular psychiatry |
Medium |
17579610
|
| 2007 |
PTPRZ1 amplification and overexpression in renal cell carcinoma activates the beta-catenin pathway: PTPRZ1 knockdown (siRNA) in RCC cell lines decreases nuclear beta-catenin and suppresses expression of target genes (cyclin D1, c-myc, c-jun, fra-1, CD44) and cellular proliferation, without involvement of Wnt signaling. |
Gene expression microarray, CGH array, siRNA knockdown, Western blot for nuclear beta-catenin, gene expression analysis |
The American journal of pathology |
Medium |
18055543
|
| 2008 |
The transcription factor Egr-1 directly regulates PTPRZ1 (phosphacan) expression in astrocytes after ischemic injury: Egr-1 binds to a site within the phosphacan promoter and transactivates its expression; Egr-1-deficient mice show reduced phosphacan RNA and protein after experimental stroke. |
Gain/loss-of-function in primary astrocytes, promoter-reporter assay, chromatin immunoprecipitation (ChIP), knockout mouse model, RT-PCR, Western blot |
The American journal of pathology |
High |
18556777
|
| 2010 |
Crystal structures of the carbonic anhydrase-like domain of PTPRZ show it interacts directly with the second and third Ig repeats of CNTN1; PTPRZ binds specifically CNTN1 (but not CNTN3/4/5/6), establishing binding specificity determined by the carbonic anhydrase-like domain. |
X-ray crystallography, direct binding assays |
Proceedings of the National Academy of Sciences of the United States of America |
High |
20133774
|
| 2011 |
PTPRZ binds specifically to CNTN1 expressed at the surface of oligodendrocyte precursor cells (OPCs); this PTPRZ/CNTN1 complex inhibits OPC proliferation and promotes their differentiation into mature oligodendrocytes, as shown in PTPRZ-deficient mice. |
Cocrystal structure of PTPRZ carbonic anhydrase-like domain with CNTN1 Ig repeats, surface binding assays, glial cell population analysis in Ptprz-/- vs. wild-type mice |
Proceedings of the National Academy of Sciences of the United States of America |
High |
21969550
|
| 2012 |
RPTPζ/phosphacan (PTPRZ1) undergoes aberrant O-mannosyl glycosylation in the brain: it is a major substrate for POMGnT1-mediated O-mannosylation; in POMGnT1-knockout mice modeling muscle-eye-brain disease, RPTPζ/phosphacan shifts to lower molecular weight and loses HNK-1 epitopes. |
Western blot, immunoprecipitation, glycan epitope analysis in POMGnT1 knockout mouse brain |
Neuroscience |
High |
22728091
|
| 2013 |
Phosphacan/PTPRZ1 is identified as the major carrier of O-mannose-linked HNK-1 glycan in developing mouse brain; GlcAT-P specifically synthesizes O-linked HNK-1 onto phosphacan; the 6B4 monoclonal antibody epitope is O-mannose-linked HNK-1 on phosphacan, as shown in GlcAT-P-deficient mice. |
Mass spectrometric glycan analysis, GlcAT-P knockout mice, co-expression in cultured cells, immunoblot |
Glycobiology |
High |
24352591
|
| 2014 |
PTPRZ1-MET (ZM) fusion transcripts arise from chromosomal translocation involving introns 3 or 8 of PTPRZ1 and intron 1 of MET in secondary glioblastomas; exogenous expression of ZM fusion in U87MG cells enhances cell migration and invasion. |
RNA-seq, RT-PCR, Sanger sequencing, genomic translocation analysis, cell migration/invasion assay after ZM overexpression |
Genome research |
High |
25135958
|
| 2015 |
ZM fusion proteins preserve wild-type MET processing and dimerization properties, and enhance MET phosphorylation in both HGF-dependent and HGF-independent manners, with increased MET mRNA expression induced by fusion with PTPRZ1 promoter. |
Western blot for phospho-MET, HGF stimulation assays, dimerization analysis, mRNA expression analysis in patient samples and transfected cells |
FEBS letters |
Medium |
25935522
|
| 2015 |
PTPRZ specifically dephosphorylates GIT1 at Tyr-554 in vitro and in HEK293T cells; this dephosphorylation promotes GIT1 association with paxillin and Hic-5; in Ptprz-deficient mice, GIT1 Tyr-554 phosphorylation is higher and paxillin binding is lower; cyclic phosphorylation-dephosphorylation at GIT1 Tyr-554 is critical for cell motility. |
In vitro phosphatase assay, site-directed mutagenesis of GIT1 Tyr-554, co-immunoprecipitation, Ptprz-/- mouse brain biochemistry, random motility/wound healing/Boyden chamber assays with GIT1 mutants |
PloS one |
High |
25742295
|
| 2016 |
The chondroitin sulfate (CS) moiety of PTPRZ-A maintains it in a monomeric active (dephosphorylated-substrate) state by electrostatic repulsion between CS chains, preventing spontaneous clustering; pleiotrophin (PTN) binding induces receptor clustering/inactivation by neutralizing CS repulsion, thereby promoting OPC differentiation. CS removal by chondroitinase ABC similarly inactivates PTPRZ and promotes OPC differentiation. |
Surface receptor localization imaging (punctate vs. diffuse distribution), chondroitinase ABC treatment of OPCs, PTN ligand application, oligodendrocyte differentiation assay, Ptn-deficient mouse analysis |
The Journal of biological chemistry |
High |
27445335
|
| 2016 |
Crystal structure of the PTPRZ catalytic domain was determined; SCB4380 binds stoichiometrically to the catalytic pocket and inhibits PTPRZ phosphatase activity; site-directed mutagenesis validated the docking-predicted binding mode; intracellular delivery of SCB4380 in C6 glioblastoma cells inhibits PTPRZ activity, suppresses migration and proliferation in vitro, and reduces tumor growth in vivo. |
X-ray crystallography, biochemical phosphatase assay, mass spectrometry, molecular docking, site-directed mutagenesis, liposome drug delivery, in vitro migration/proliferation assay, rat allograft tumor model |
Scientific reports |
High |
26857455
|
| 2017 |
TAMs secrete pleiotrophin (PTN) to activate PTPRZ1 signaling in glioma stem cells (GSCs); disrupting PTPRZ1 (shRNA or anti-PTPRZ1 antibody) abrogates GSC maintenance and tumorigenicity; silencing PTN in M2-like macrophages reduces their pro-tumorigenic activity; PTPRZ1 is preferentially expressed on GSCs. |
GSC co-implantation with M2 macrophages, shRNA knockdown, antibody blockade, neurosphere formation assay, in vivo tumor growth assay |
Nature communications |
High |
28569747
|
| 2017 |
PTPRZ knockdown in C6 and U251 glioblastoma sphere-forming cells alters expression of stem cell transcription factors SOX2, OLIG2, and POU3F2 and decreases sphere-forming ability; the small-molecule allosteric inhibitor NAZ2329 reduces SOX2 expression and sphere-forming ability, and slows tumor growth in xenograft model when combined with temozolomide. |
Stable PTPRZ shRNA knockdown, small-molecule inhibitor (NAZ2329) treatment, sphere-forming assay, Western blot for transcription factors, C6 xenograft mouse model |
Scientific reports |
High |
28717188
|
| 2019 |
PTPRZ dephosphorylates AFAP1L2 at tyrosine residues in vitro and in HEK293T cells; PTN-PTPRZ signaling enhances phosphorylation of AFAP1L2, AKT, and mTOR in OPC-like cells to activate the PI3K-AKT pathway for OPC differentiation; catalytically inactive PTPRZ knock-in mice (CS mutation) show higher AFAP1L2/AKT/mTOR phosphorylation and accelerated OPC differentiation and remyelination. |
In vitro phosphatase assay with AFAP1L2 substrate, HEK293T cell transfection, PTN stimulation of OL1 cells, PTPRZ catalytic dead knock-in mouse (Cys-to-Ser), cuprizone demyelination model, Western blot for phosphoproteins |
Glia |
High |
30667096
|
| 2019 |
RPTPζ/PTPRZ1 is required for perineuronal net (PNN) reticulated structure: in Ptprz1-/- mice, PNNs lose their reticular lattice and form puncta, phenocopying tenascin-R knockout; RPTPζ mediates one of two distinct modes of PNN component anchoring to the neuronal surface (the other requiring hyaluronan). |
Ptprz1-/- mouse analysis, immunostaining of PNN components, biochemical fractionation, neuronal culture experiments |
The Journal of biological chemistry |
High |
31822561
|
| 2019 |
Ptprz-knockout mice lacking all three isoforms show increased exploratory activity, deficits in spatial and contextual learning, and reduced responses to methamphetamine including reduced methamphetamine-evoked dopamine release in nucleus accumbens; phosphatase activity of PTPRZ receptor isoforms (CS mutant mice) is specifically required for dopaminergic regulation, while the extracellular region (including secretory isoform) mediates behavioral responses to novelty and aversive memory. |
Behavioral testing (open field, inhibitory avoidance), Ptprz-KO and knock-in mouse lines (CS catalytic dead, ΔD2 domain deletion), microdialysis for dopamine measurement |
PloS one |
High |
31194769
|
| 2019 |
GlcNAc6ST3 (encoded by Chst5, expressed in oligodendrocytes in adult brain) is a major keratan sulfate sulfotransferase for PTPRZ1; a KS-modified isoform of PTPRZ1 is a major R-10G-reactive KS proteoglycan associated with perineuronal nets in adult brain. |
Immunostaining with R-10G anti-KS antibody, Chst5-specific in situ hybridization, mass spectrometry-based proteoglycan identification, adult visual cortex analysis |
Scientific reports |
Medium |
30867513
|
| 2021 |
ZM fusion protein activates MET kinase in a ligand-independent manner, attributed to a coiled-coil motif from the PTPRZ1 fusion partner that promotes dimerization/activation of the MET extracellular domain; ZM-positive clinical specimens show hyperactivation of MET signaling. |
3D structural prediction, coiled-coil motif analysis, cell line experiments with ZM expression, phospho-MET analysis in patient specimens |
CNS neuroscience & therapeutics |
Medium |
33645009
|
| 2023 |
RPTPζ/PTPRZ1 ectodomain forms direct protein-protein complexes with tenascin-R and tenascin-C; structural basis for these interactions was determined; mutations at the RPTPζ-TNR interface impair PNN formation in dissociated neuronal cultures; TNR is absent from net structures in Ptprz1-/- neuronal cultures. |
Structural determination of PTPRZ1 ectodomain-TNR complex, binding assays, Ptprz1-/- neuronal cultures, site-directed mutagenesis at interface residues, immunostaining of PNN components |
The Journal of biological chemistry |
High |
37356715
|
| 2023 |
PTPRZ1 deletion or pharmacological inhibition of its phosphatase activity in endothelial cells activates c-Met and Akt kinase, increasing angiogenesis; PTPRZ1 mediates c-Met activation by VEGFA165 and pleiotrophin in endothelial cells, and this effect is abolished by the c-Met inhibitor crizotinib; Ptprz1-/- mice show enhanced LUAD growth and lung angiogenesis. |
Ptprz1-/- mouse model, lung microvascular endothelial cell isolation, PTPRZ1 pharmacological inhibitor, Western blot for c-Met/Akt phosphorylation, in vitro angiogenesis assay, LUAD urethane model, crizotinib rescue experiment |
International journal of cancer |
High |
37260355
|
| 2024 |
PTPRZ1-MET (ZM) fusion in GSCs activates MET-STAT3-ISG20 axis; ZM-positive GSCs secrete ISG20 extracellularly to recruit macrophages and drive their polarization toward an immunosuppressive M2-like phenotype, thereby promoting tumor progression. |
RNA-seq of sGBM patient tissues, GSC sphere cultures with ZM, ISG20 knockdown/overexpression, macrophage polarization assays, conditioned medium experiments |
Cellular signalling |
Medium |
38685521
|
| 2025 |
Curcumin directly interacts with PTPRZ1 to maintain its enzymatic phosphatase activity, which in turn regulates phosphorylation of the m6A-reader YTHDF2; this PTPRZ1-YTHDF2 axis modulates expression of inflammatory genes to reduce microglial inflammatory responses. |
Binding assay of curcumin with PTPRZ1, phosphatase activity assay, phosphorylation analysis of YTHDF2, gene expression analysis, microglial inflammatory assay |
Advanced science (Weinheim, Baden-Wurttemberg, Germany) |
Medium |
39921492
|