Affinage

PIGS

GPI-anchor transamidase component PIGS · UniProt Q96S52

Length
555 aa
Mass
61.7 kDa
Annotated
2026-06-10
100 papers in source corpus 2 papers cited in narrative 2 extracted findings
Cross-family judge vs UniProt: Affinage preferred faithfulness: 3/3 claims corpus-supported (100%)

Mechanistic narrative

Synthesis pass · prose summary of the discoveries below

PIGS (PIG-S) is an essential non-catalytic subunit of the endoplasmic reticulum GPI transamidase complex that transfers pre-assembled glycosylphosphatidylinositol (GPI) anchors onto substrate proteins (PMID:11483512). PIGS assembles into a stable complex with GAA1, GPI8, and PIG-T, and its loss abolishes GPI transfer by specifically blocking formation of the carbonyl intermediates that are the biochemical hallmark of the transamidation reaction (PMID:11483512). Structural characterization of the yeast ortholog (Gpi17p) indicates an elongated two-domain architecture, consistent with PIGS serving as a structural component spanning the transamidase complex (PMID:21134462). Beyond its role as a complex subunit and the carbonyl-intermediate step, no further catalytic or regulatory mechanism for PIGS has been characterized in the available corpus.

Mechanistic history

Synthesis pass · year-by-year structured walk · 2 steps
  1. 2001 High

    Established that PIGS is an essential, dedicated subunit of the GPI transamidase machinery and pinpointed which step of the transamidation reaction it enables.

    Evidence Homologous recombination knockout in mouse F9 cells with a GPI anchoring/carbonyl-intermediate assay, plus co-immunoprecipitation of complex members and identification of the yeast ortholog Gpi17p

    PMID:11483512

    Open questions at the time
    • Whether PIGS contributes any catalytic activity or is purely structural/scaffolding within the complex was not resolved
    • The molecular role of PIGS in forming or stabilizing the carbonyl intermediate (e.g. substrate or GPI positioning) was not defined
    • No structural basis for how PIGS contacts GAA1, GPI8, or PIG-T was determined
  2. 2010 Medium

    Provided the first structural view of the PIGS subunit, showing it is an elongated two-domain protein rather than a compact globular subunit.

    Evidence Small-angle X-ray scattering and circular dichroism on recombinant yeast ortholog (residues 38-467) produced in E. coli

    PMID:21134462

    Open questions at the time
    • Low-resolution solution envelope only; no atomic structure, no mutagenesis, and no functional validation
    • Performed on the yeast ortholog in isolation, not within the assembled transamidase complex or with the human protein
    • Does not assign which domain mediates complex assembly versus substrate handling

Open questions

Synthesis pass · forward-looking unresolved questions
  • The precise mechanistic contribution of PIGS to the transamidation chemistry and its contacts with the other transamidase subunits remain undefined.
  • No high-resolution structure of human PIGS within the intact transamidase complex
  • No definition of substrate or GPI-binding determinants on PIGS
  • No link to disease established within this corpus

Mechanism profile

Synthesis pass · controlled-vocabulary classification · explore literature graph →
Molecular activity
GO:0140096 catalytic activity, acting on a protein 1
Localization
GO:0005783 endoplasmic reticulum 1
Pathway
R-HSA-392499 Metabolism of proteins 1
Partners
Complex memberships
GPI transamidase complex

Evidence

Reading pass · 2 per-paper findings extracted from the source corpus
Year Finding Method Journal Conf PMIDs
2001 PIGS (PIG-S) is an essential subunit of the GPI transamidase complex in the endoplasmic reticulum. Homologous recombination knockout of PIGS in mouse F9 cells abolished transfer of GPI to proteins, specifically blocking formation of the carbonyl intermediates that are the hallmark of the transamidation reaction. PIGS forms a protein complex with GAA1, GPI8, and PIG-T, and the yeast ortholog is Gpi17p (YDR434W). Homologous recombination knockout in mouse F9 cells, GPI anchoring assay (carbonyl intermediate formation), co-immunoprecipitation of complex members The EMBO journal High 11483512
2010 The yeast ortholog of PIGS (yPIG-S, residues 38-467) adopts an elongated two-domain solution structure as determined by small-angle X-ray scattering (SAXS), with a larger domain (~10.1 nm length) and a smaller domain (~6.7 nm length) tilted relative to each other, and secondary structure comprising ~58% α-helix and ~18% β-sheet. This structural characterization places yPIG-S as an elongated subunit within the GPI transamidase complex. Small-angle X-ray scattering (SAXS), circular dichroism spectroscopy, recombinant protein production in E. coli Journal of structural biology Medium 21134462

Source papers

Stage 0 corpus · 100 papers · ranked by NIH iCite citations
Year Title Journal Citations PMID
1997 Infection of human cells by an endogenous retrovirus of pigs. Nature medicine 891 9055854
1985 Production of transgenic rabbits, sheep and pigs by microinjection. Nature 643 3892305
2007 Control of Mycoplasma hyopneumoniae infections in pigs. Veterinary microbiology 290 17964089
2002 Germ cell transplantation in pigs. Biology of reproduction 202 11751259
2005 Clostridial enteric infections in pigs. Journal of veterinary diagnostic investigation : official publication of the American Association of Veterinary Laboratory Diagnosticians, Inc 171 16475510
1997 Synthesis of citrulline and arginine from proline in enterocytes of postnatal pigs. The American journal of physiology 152 9227473
2001 PIG-S and PIG-T, essential for GPI anchor attachment to proteins, form a complex with GAA1 and GPI8. The EMBO journal 143 11483512
2006 Recombinant nipah virus vaccines protect pigs against challenge. Journal of virology 142 16873250
2011 Genetic modifications of pigs for medicine and agriculture. Molecular reproduction and development 139 21671302
2013 Pregnancy recognition signaling mechanisms in ruminants and pigs. Journal of animal science and biotechnology 138 23800120
2019 Transplanting organs from pigs to humans. Science immunology 137 31676497
2020 Extensive germline genome engineering in pigs. Nature biomedical engineering 125 32958897
2010 Genetic modification of pigs as organ donors for xenotransplantation. Molecular reproduction and development 123 19998476
1997 Regulation of conceptus development and attachment in pigs. Journal of reproduction and fertility. Supplement 116 9602725
2012 Uterine biology in pigs and sheep. Journal of animal science and biotechnology 107 22958877
1998 Leptospira fainei sp. nov., isolated from pigs in Australia. International journal of systematic bacteriology 104 9734039
2017 Update on Senecavirus Infection in Pigs. Viruses 98 28671611
2020 Dysregulated ribonucleoprotein granules promote cardiomyopathy in RBM20 gene-edited pigs. Nature medicine 96 33188278
2012 Transgenerational toxicity of Zearalenone in pigs. Reproductive toxicology (Elmsford, N.Y.) 96 22484360
1984 Experimental asthma in guinea pigs revisited. International archives of allergy and applied immunology 95 6141145
2017 Detection of dietetically absorbed maize-derived microRNAs in pigs. Scientific reports 84 28381865
2007 Advances in QTL mapping in pigs. International journal of biological sciences 84 17384738
2012 Genetically modified pigs for biomedical research. Journal of inherited metabolic disease 80 22453682
2015 Concept and application of ideal protein for pigs. Journal of animal science and biotechnology 76 25937926
2017 Cold adaptation in pigs depends on UCP3 in beige adipocytes. Journal of molecular cell biology 74 28486585
1993 Early uterine development in pigs. Journal of reproduction and fertility. Supplement 72 8145217
2004 Susceptibility of pigs and chickens to SARS coronavirus. Emerging infectious diseases 69 15030680
2018 Genome Editing of Pigs for Agriculture and Biomedicine. Frontiers in genetics 67 30233645
1995 Follicular atresia in pigs: measurement and physiology. Journal of animal science 67 8582874
2004 Antioxidant intervention prevents renal neovascularization in hypercholesterolemic pigs. Journal of the American Society of Nephrology : JASN 63 15213269
1990 A spiral microorganism in the stomach of pigs. Veterinary microbiology 58 1700535
2013 Feed energy evaluation for growing pigs. Asian-Australasian journal of animal sciences 57 25049902
1985 Influence of environmental temperature on prolificacy of pigs. Journal of reproduction and fertility. Supplement 55 3910825
1981 Cytomegalovirus-induced mononucleosis in guinea pigs. Infection and immunity 54 6265366
2017 Immunomodulatory effects of phytogenics in chickens and pigs - A review. Asian-Australasian journal of animal sciences 53 29268586
1989 Establishment of pregnancy in sheep and pigs. Reproduction, fertility, and development 49 2682807
2018 Bat-Origin Coronaviruses Expand Their Host Range to Pigs. Trends in microbiology 48 29680361
2016 Pigs as models of human cancers. Theriogenology 46 27156684
2016 Assessment of Domestic Pigs, Wild Boars and Feral Hybrid Pigs as Reservoirs of Hepatitis E Virus in Corsica, France. Viruses 46 27556478
2011 Osseointegration of SLActive implants in diabetic pigs. Clinical oral implants research 46 22111960
1990 Ruminant pestivirus infection in pigs. Revue scientifique et technique (International Office of Epizootics) 46 1966720
1996 Intestinal Chlamydia in finishing pigs. Veterinary pathology 45 8817833
1991 Expression of mouse IgA by transgenic mice, pigs and sheep. European journal of immunology 44 2019284
2022 Sertoli cell and spermatogonial development in pigs. Journal of animal science and biotechnology 43 35399096
2016 Salmonella Vaccination in Pigs: A Review. Zoonoses and public health 43 26853216
2014 Species-dependent neuropathology in transgenic SOD1 pigs. Cell research 43 24577199
2009 Genetic manipulation in pigs. Current opinion in organ transplantation 43 19469029
2003 Creating genetically modified pigs by using nuclear transfer. Reproductive biology and endocrinology : RB&E 42 14613542
1971 Isolation and characterization of a herpesvirus from leukemic guinea pigs. Journal of virology 41 4108575
2016 Interleukins, interferons, and establishment of pregnancy in pigs. Reproduction (Cambridge, England) 39 27001998
2006 Chlamydiales in guinea-pigs and their zoonotic potential. Journal of veterinary medicine. A, Physiology, pathology, clinical medicine 39 16629952
2005 Exudative epidermitis in pigs caused by toxigenic Staphylococcus chromogenes. Veterinary microbiology 36 15708827
1990 Molecular basis of complement C3 deficiency in guinea pigs. The Journal of clinical investigation 35 1973176
1990 Expression and performance in transgenic pigs. Journal of reproduction and fertility. Supplement 35 2192041
2020 Genetically Engineered Pigs to Study Cancer. International journal of molecular sciences 34 31940967
2009 Enteric calicivirus and rotavirus infections in domestic pigs. Epidemiology and infection 34 19781118
2017 Molecules produced by probiotics prevent enteric colibacillosis in pigs. BMC veterinary research 33 29141637
2009 Experimental ocular tuberculosis in guinea pigs. Archives of ophthalmology (Chicago, Ill. : 1960) 33 19752425
2016 Pharmacology of Bradykinin-Evoked Coughing in Guinea Pigs. The Journal of pharmacology and experimental therapeutics 32 27000801
1997 Steroidogenic enzyme expression during preovulatory follicle maturation in pigs. Biology of reproduction 32 9166694
2020 Effects of endocrine disrupting chemicals in pigs. Environmental pollution (Barking, Essex : 1987) 31 32268228
2001 Apoptosis during folliculogenesis in pigs. Reproduction (Cambridge, England). Supplement 31 11980188
2019 Effect of quercetin on ovarian cells of pigs and cattle. Animal reproduction science 30 30981564
1996 Effects of colostrum feeding on intestinal development in newborn pigs. Biology of the neonate 30 9001695
2018 Identification and comparison of long non-conding RNA in Jinhua and Landrace pigs. Biochemical and biophysical research communications 28 29890140
2009 Ghrelin and its biological effects on pigs. Peptides 28 19463757
2023 Fecal transplant from myostatin deletion pigs positively impacts the gut-muscle axis. eLife 27 37039469
2017 LncRNA profiling of skeletal muscles in Large White pigs and Mashen pigs during development. Journal of animal science 27 29108073
2004 Cloning CYP2D21 and CYP3A22 cDNAs from liver of miniature pigs. Drug metabolism and disposition: the biological fate of chemicals 27 15039288
2002 Clinical xenotransplantation: pigs might fly? American journal of transplantation : official journal of the American Society of Transplantation and the American Society of Transplant Surgeons 27 12243490
2022 Insect as feed ingredients for pigs. Animal bioscience 26 34991213
2012 Production of cloned pigs expressing human thrombomodulin in endothelial cells. Xenotransplantation 26 22497510
2007 Pigs taking wing with transposons and recombinases. Genome biology 26 18047690
2021 Magnitude and Kinetics of T Cell and Antibody Responses During H1N1pdm09 Infection in Inbred Babraham Pigs and Outbred Pigs. Frontiers in immunology 25 33603740
2018 Influenza B viruses in pigs, Taiwan. Influenza and other respiratory viruses 22 29996007
2015 When pigs fly, UCP1 makes heat. Molecular metabolism 21 25973382
2022 Pigs (Sus Scrofa) in Biomedical Research. Advances in experimental medicine and biology 20 34807450
2017 Imatinib relaxes the pulmonary venous bed of guinea pigs. Respiratory research 20 28178968
2008 Multifocal electroretinogram in rhodopsin P347L transgenic pigs. Investigative ophthalmology & visual science 20 18223250
1993 Sources and biological actions of relaxin in pigs. Journal of reproduction and fertility. Supplement 19 8145201
2020 Multilocus genotyping of Giardia duodenalis from pigs in Korea. Parasitology international 17 32531468
2015 Lipopolysaccharide significantly influences the hepatic triglyceride metabolism in growing pigs. Lipids in health and disease 17 26121977
2014 Detecting mitochondrial signatures of selection in wild Tibetan pigs and domesticated pigs. Mitochondrial DNA. Part A, DNA mapping, sequencing, and analysis 17 24810064
2018 Assembling multiple xenoprotective transgenes in pigs. Xenotransplantation 16 30055014
2023 Distinct Transcriptional Responses of Skeletal Muscle to Short-Term Cold Exposure in Tibetan Pigs and Bama Pigs. International journal of molecular sciences 15 37108597
2021 A Methodology to Quantify Resilience in Growing Pigs. Animals : an open access journal from MDPI 15 34679989
2019 Physical inactivity and knee osteoarthritis in guinea pigs. Osteoarthritis and cartilage 15 31302235
2003 Corynebacterium suicordis sp. nov., from pigs. International journal of systematic and evolutionary microbiology 14 14657140
1997 Developments in transgenic techniques in pigs. Journal of reproduction and fertility. Supplement 14 9602732
2020 Transcriptomic comparison of liver tissue between Anqing six-end-white pigs and Yorkshire pigs based on RNA sequencing. Genome 13 31928416
2020 Thymol modulates the endocannabinoid system and gut chemosensing of weaning pigs. BMC veterinary research 13 32787931
2018 Role of AMPK signalling pathway during compensatory growth in pigs. BMC genomics 13 30223793
2017 Transplantation of hepatocytes from genetically engineered pigs into baboons. Xenotransplantation 13 28130881
2022 Change of Gut Microbiota in PRRSV-Resistant Pigs and PRRSV-Susceptible Pigs from Tongcheng Pigs and Large White Pigs Crossed Population upon PRRSV Infection. Animals : an open access journal from MDPI 12 35739841
2013 Experimental teschovirus encephalomyelitis in gnotobiotic pigs. Journal of comparative pathology 12 24650890
2011 Microarray and cytokine analyses of field cases of pigs with diarrhoea. Veterinary microbiology 12 21741782
2010 Structural insight into the glycosylphosphatidylinositol transamidase subunits PIG-K and PIG-S from yeast. Journal of structural biology 12 21134462
1983 Postnatal DNA-syntheses and mitoses in hearts of dwarf pigs. Journal of molecular and cellular cardiology 12 6663631
2017 Gene Location, Expression, and Function of FNDC5 in Meishan Pigs. Scientific reports 11 28801552
2011 Expression and imprinting analysis of the NESP55 gene in pigs. Gene expression patterns : GEP 11 22067442

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