Affinage

PARVB

Beta-parvin · UniProt Q9HBI1

Length
364 aa
Mass
41.7 kDa
Annotated
2026-06-10
14 papers in source corpus 8 papers cited in narrative 8 extracted findings
Cross-family judge vs UniProt: Affinage preferred faithfulness: 4/5 claims corpus-supported (80%)

Mechanistic narrative

Synthesis pass · prose summary of the discoveries below

PARVB (beta-parvin) is a focal adhesion adaptor that couples integrin engagement to Rho-family GTPase signaling and cell motility (PMID:12499396). It physically interacts with the guanine nucleotide exchange factor ARHGEF6 (alphaPIX) through both the CH and coiled-coil domains of ARHGEF6, and the two proteins co-localize at lamellipodia and ruffles in cells spreading on fibronectin, placing PARVB upstream of Rac1/Cdc42 activation (PMID:12499396). PARVB also operates as a regulator of cell survival: it associates with the kinase TAK1 and protects it from degradation by blocking the E3 ligase ITCH from binding and ubiquitinating TAK1, so that loss of PARVB promotes TAK1 degradation and sensitizes proximal tubular epithelial cells to cisplatin-induced death and inflammation (PMID:39235496). In a separate survival axis, PARVB acts downstream of FSCN2/PPAR-γ and negatively modulates the ILK–AKT pathway, with PARVB knockdown restoring ILK-AKT activity and promoting proliferation and migration (PMID:38374196). PARVB expression is transcriptionally induced under hypoxia through HIF-1α/2α binding to a hypoxia-responsive element in its promoter, and its function as a driver of cell migration, invasion, and proliferation has been demonstrated across melanoma and tongue squamous cell carcinoma models (PMID:25422907, PMID:38301409).

Mechanistic history

Synthesis pass · year-by-year structured walk · 6 steps
  1. 2003 High

    Established the first direct molecular partner of PARVB, linking it physically to the integrin-to-GTPase signaling machinery rather than treating it as a generic adhesion protein.

    Evidence Yeast two-hybrid, reciprocal Co-IP, GST pull-down, domain-deletion mapping, and immunofluorescence co-localization on fibronectin

    PMID:12499396

    Open questions at the time
    • Whether PARVB directly modulates ARHGEF6 GEF activity toward Rac1/Cdc42 was not measured
    • No structural detail of the PARVB-ARHGEF6 interface
  2. 2024 High

    Defined a survival role for PARVB by showing it stabilizes TAK1 protein through competitive blockade of ITCH-mediated ubiquitination, explaining how PARVB loss sensitizes cells to injury.

    Evidence Conditional Cre-LoxP knockout in proximal tubular epithelium, Co-IP of PARVB-TAK1 and ITCH-TAK1, ubiquitination assay, and PARVB/TAK1 rescue plus in vivo cisplatin model

    PMID:39235496

    Open questions at the time
    • Whether PARVB occludes the ITCH binding site directly or allosterically is unresolved
    • Generalizability beyond renal tubular cells untested
  3. 2024 Medium

    Positioned PARVB within the FSCN2/PPAR-γ axis as a negative modulator of the ILK-AKT survival pathway in cochlear cells.

    Evidence Fscn2 knockout mouse, microarray, siRNA knockdown, overexpression rescue, PPAR-γ inhibition, and Western blot of ILK/p-AKT/Bcl-2/Caspase9

    PMID:38374196

    Open questions at the time
    • No direct biochemical reconstitution of a PARVB-ILK interaction
    • Mechanism by which PARVB suppresses ILK activity unclear
  4. 2024 Medium

    Identified hypoxia as an upstream transcriptional driver of PARVB and tied its expression to tumor cell motility and growth.

    Evidence HIF-1α/2α knockdown, promoter hypoxia-responsive element analysis, in vitro proliferation/migration/invasion assays, and melanoma xenograft

    PMID:38301409

    Open questions at the time
    • Direct HIF binding to the PARVB promoter element not shown by ChIP
    • Downstream effectors of PARVB in melanoma not defined
  5. 2024 Medium

    Confirmed PARVB as a functionally required driver of cell motility in a second cancer context.

    Evidence siRNA knockdown with migration and wound-healing assays in tongue squamous cell carcinoma cells

    PMID:25422907

    Open questions at the time
    • No molecular pathway linking PARVB to migration in this model
    • Single lab, related rather than orthogonal assays
  6. 2025 Low

    Extended PARVB's pro-tumor role to additional contexts and candidate effector pathways (JAK2/STAT3 and EMT, PALB2-dependent macropinocytosis, and a SMAD3-TNFSF13 immunosuppressive axis).

    Evidence In vitro knockdown/overexpression, 3D spheroid and macropinocytosis assays, transcriptomic/scRNA-seq and multiplex IHC across glioblastoma, PALB2-mutated breast, and cervical cancer

    PMID:34568031 PMID:40730089 PMID:40744226

    Open questions at the time
    • No direct biochemical validation of PARVB-JAK2/STAT3 or PARVB-SMAD3 interactions
    • Mechanism placing PARVB downstream of PALB2 unresolved
    • Pathway links inferred largely from transcriptomic/IHC correlation

Open questions

Synthesis pass · forward-looking unresolved questions
  • How PARVB integrates its distinct roles—ARHGEF6/GTPase scaffolding, TAK1 stabilization, and ILK-AKT modulation—into a unified mechanism, and which domains govern each, remains unresolved.
  • No structural model of PARVB defining domain-specific partner binding
  • Whether the survival and migration functions are mechanistically coupled is unknown

Mechanism profile

Synthesis pass · controlled-vocabulary classification · explore literature graph →
Molecular activity
GO:0060090 molecular adaptor activity 2 GO:0008092 cytoskeletal protein binding 1
Localization
GO:0005856 cytoskeleton 1
Pathway
R-HSA-5357801 Programmed Cell Death 2 R-HSA-162582 Signal Transduction 1
Partners

Evidence

Reading pass · 8 per-paper findings extracted from the source corpus
Year Finding Method Journal Conf PMIDs
2003 PARVB (beta-parvin) physically interacts with ARHGEF6 (alphaPIX), as demonstrated by yeast two-hybrid screening, co-immunoprecipitation, and GST pull-down assays. Both the N-terminal calponin homology (CH) domain and C-terminal coiled-coil domain of ARHGEF6 are required for the interaction. PARVB and ARHGEF6 co-localize at lamellipodia and ruffles in cells spreading on fibronectin, placing PARVB upstream of Rac1/Cdc42 activation in integrin-mediated signaling. Yeast two-hybrid, co-immunoprecipitation, GST pull-down, immunofluorescence co-localization, domain-deletion mutagenesis Human molecular genetics High 12499396
2024 PARVB associates with TAK1 (transforming growth factor-β-activated kinase 1) and prevents its ubiquitination by blocking the E3 ligase ITCH from binding TAK1. Conditional knockout of PARVB in proximal tubular epithelial cells promotes cisplatin-induced TAK1 degradation, inhibits TAK1 downstream signaling, and alleviates tubular cell death and inflammation. Restoration of PARVB or TAK1 in PARVB-deficient cells rescues cisplatin-induced injury, placing PARVB as a regulator of TAK1 protein stability via an ITCH-dependent ubiquitination pathway. Conditional knockout (Cre-LoxP), co-immunoprecipitation (PARVB-TAK1 and ITCH-TAK1 interaction), ubiquitination assay, rescue experiments with PARVB/TAK1 re-expression, in vivo mouse model Cellular and molecular life sciences : CMLS High 39235496
2024 PARVB knockdown in tongue squamous cell carcinoma cells causes decreases in cell migration and wound healing, establishing PARVB as a functionally required driver of cell motility. siRNA knockdown, cell migration assay, wound healing assay British journal of cancer Medium 25422907
2024 In Fascin2 (Fscn2) knockout cochlear cells, PARVB is upregulated and this upregulation is associated with decreased ILK, p-ILK, p-AKT, and Bcl-2 levels and increased cleaved-Caspase9. Knockdown of PARVB in HEI-OC1 cells promotes cell proliferation, migration, and rescues ILK-AKT pathway activity. FSCN2 negatively regulates PARVB expression by inhibiting PPAR-γ nuclear translocation, placing PARVB downstream of FSCN2/PPAR-γ and upstream of the ILK-AKT survival pathway. Fscn2 knockout mouse model, microarray, siRNA knockdown, PARVB/Fscn2 overexpression, Western blot (ILK, p-ILK, p-AKT, Bcl-2, Caspase9), PPAR-γ inhibitor (GW9662), cell proliferation and migration assays Cell death discovery Medium 38374196
2024 HIF-1α/2α transcription factors elevate PARVB expression under hypoxic conditions by binding to a hypoxia-responsive element in the PARVB promoter. Silencing PARVB reduces melanoma cell proliferation, migration, and invasion in vitro and decelerates tumor growth in vivo. HIF-1α/2α knockdown, PARVB promoter hypoxia-responsive element analysis, in vitro proliferation/migration/invasion assays, in vivo xenograft Translational oncology Medium 38301409
2021 PARVB promotes glioblastoma cell proliferation, migration, and invasion partially through activation of the JAK2/STAT3 pathway and induction of epithelial-mesenchymal transition (EMT), as demonstrated by in vitro functional assays. In vitro knockdown/overexpression, cell proliferation, migration and invasion assays, JAK2/STAT3 pathway analysis Frontiers in oncology Low 34568031
2025 PARVB is upregulated in PALB2-mutated breast epithelial cells and knockdown of PARVB reduces cell migration and morphological abnormalities of PALB2-mutated spheroids. Furthermore, macropinocytosis is enhanced in PALB2-mutated cells in a PARVB-dependent manner. siRNA knockdown, cell migration assay, 3D spheroid morphology, macropinocytosis assay (dextran uptake) Biochemical and biophysical research communications Low 40730089
2025 PARVB activates the SMAD signaling axis leading to upregulation of TNFSF13, which promotes M2 macrophage polarization; this PARVB-SMAD3-TNFSF13 axis enhances immunosuppressive interactions and drives tumor proliferation, as supported by functional assays and multiplex immunohistochemistry in cervical cancer. Transcriptomic/single-cell RNA-seq analysis, functional assays, multiplex immunohistochemistry Laboratory investigation; a journal of technical methods and pathology Low 40744226

Source papers

Stage 0 corpus · 14 papers · ranked by NIH iCite citations
Year Title Journal Citations PMID
2013 Genome-wide scan revealed that polymorphisms in the PNPLA3, SAMM50, and PARVB genes are associated with development and progression of nonalcoholic fatty liver disease in Japan. Human genetics 165 23535911
2003 Interaction of alphaPIX (ARHGEF6) with beta-parvin (PARVB) suggests an involvement of alphaPIX in integrin-mediated signaling. Human molecular genetics 104 12499396
2015 Targeted-bisulfite sequence analysis of the methylation of CpG islands in genes encoding PNPLA3, SAMM50, and PARVB of patients with non-alcoholic fatty liver disease. Journal of hepatology 70 25776890
2014 PARVB overexpression increases cell migration capability and defines high risk for endophytic growth and metastasis in tongue squamous cell carcinoma. British journal of cancer 30 25422907
2014 Targeted next-generation sequencing and fine linkage disequilibrium mapping reveals association of PNPLA3 and PARVB with the severity of nonalcoholic fatty liver disease. Journal of human genetics 18 24621583
2021 Construction of Novel Methylation-Driven Gene Model and Investigation of PARVB Function in Glioblastoma. Frontiers in oncology 12 34568031
2015 Association of rs5764455 and rs6006473 polymorphisms in PARVB with liver damage of nonalcoholic fatty liver disease in Han Chinese population. Gene 11 26343796
2021 Interaction of SAMM50-rs738491, PARVB-rs5764455 and PNPLA3-rs738409 Increases Susceptibility to Nonalcoholic Steatohepatitis. Journal of clinical and translational hepatology 10 35528982
2013 Pathway analysis using genome-wide association study data for coronary restenosis--a potential role for the PARVB gene. PloS one 9 23950981
2024 PARVB promotes malignant melanoma progression and is enhanced by hypoxic conditions. Translational oncology 3 38301409
2024 Inhibition of the ILK-AKT pathway by upregulation of PARVB contributes to the cochlear cell death in Fascin2 gene knockout mice. Cell death discovery 3 38374196
2024 PARVB deficiency alleviates cisplatin-induced tubular injury by inhibiting TAK1 signaling. Cellular and molecular life sciences : CMLS 3 39235496
2025 PALB2 mutations increase oncogenic properties of breast epithelial cells by enhancing JAM3 and PARVB expression. Biochemical and biophysical research communications 0 40730089
2025 Potential Role of PARVB in Macrophage-Mediated Immunosuppression and Cervical Cancer Progression. Laboratory investigation; a journal of technical methods and pathology 0 40744226

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