Affinage

PARVB

Beta-parvin · UniProt Q9HBI1

Length
364 aa
Mass
41.7 kDa
Annotated
2026-04-29
14 papers in source corpus 8 papers cited in narrative 8 extracted findings

Mechanistic narrative

Synthesis pass · prose summary of the discoveries below

PARVB (β-parvin) is a focal adhesion scaffold protein that coordinates integrin-linked signaling with cytoskeletal remodeling, cell migration, and cell survival. PARVB physically interacts with the Rac1/Cdc42 guanine-nucleotide exchange factor ARHGEF6 (αPIX) at lamellipodia and membrane ruffles, coupling integrin engagement on fibronectin to Rho-family GTPase activation and actin reorganization (PMID:12499396), and is functionally required for cell migration and macropinocytosis in multiple cellular contexts (PMID:25422907, PMID:40730089). PARVB also stabilizes TAK1 by competitively blocking the E3 ubiquitin ligase ITCH from binding TAK1, thereby preventing TAK1 ubiquitination and degradation and sustaining downstream inflammatory and survival signaling; conditional knockout in mouse renal tubular epithelium confirms this protective role in vivo (PMID:39235496). PARVB expression is transcriptionally induced by HIF-1α/HIF-2α through a hypoxia-responsive element in its promoter, and elevated PARVB can suppress ILK–AKT survival signaling or, context-dependently, promote proliferation and invasion via JAK2/STAT3 (PMID:38301409, PMID:38374196, PMID:34568031).

Mechanistic history

Synthesis pass · year-by-year structured walk · 7 steps
  1. 2003 High

    Identifying PARVB's first direct binding partner established it as a physical link between integrin adhesion complexes and Rac1/Cdc42 activation at the cell cortex.

    Evidence Yeast two-hybrid, reciprocal co-IP, GST pull-down, and immunofluorescence co-localization of PARVB with ARHGEF6 at lamellipodia in cells spreading on fibronectin; domain-mapping using X-linked mental retardation deletion mutants of ARHGEF6

    PMID:12499396

    Open questions at the time
    • Whether PARVB binding stimulates ARHGEF6 GEF catalytic activity was not tested
    • Downstream Rac1/Cdc42 activation was inferred, not directly measured
    • Role of ILK in bridging PARVB to integrin complexes was not addressed
  2. 2014 Medium

    Loss-of-function experiments demonstrated that PARVB is functionally required for cell migration and wound healing, moving beyond interaction mapping to establish a cellular phenotype.

    Evidence siRNA knockdown in tongue squamous cell carcinoma cells with migration and wound-healing assays

    PMID:25422907

    Open questions at the time
    • Mechanism downstream of PARVB depletion (specific GTPase, actin regulator) was not dissected
    • Only one cell type examined
    • Rescue with re-expression not reported
  3. 2021 Medium

    Connecting PARVB to the JAK2/STAT3 signaling axis and EMT broadened its functional scope beyond pure cytoskeletal scaffolding to include pro-invasive transcriptional programs.

    Evidence Overexpression and knockdown of PARVB in glioblastoma cell lines with JAK2/STAT3 pathway inhibitor and reporter assays

    PMID:34568031

    Open questions at the time
    • Direct physical interaction between PARVB and JAK2 or STAT3 was not demonstrated
    • Whether the JAK2/STAT3 link is cell-type-specific is unknown
    • In vivo validation was absent
  4. 2024 High

    Demonstrating that PARVB stabilizes TAK1 by competing with the E3 ligase ITCH revealed a non-cytoskeletal function — control of kinase turnover — with in vivo relevance for inflammatory signaling and cell death.

    Evidence Conditional proximal tubule-specific PARVB knockout mouse, co-IP of PARVB–TAK1 and ITCH–TAK1, in vivo/in vitro ubiquitination assays, genetic rescue with PARVB or TAK1 restoration

    PMID:39235496

    Open questions at the time
    • Structural basis of the competitive PARVB–ITCH interaction on TAK1 is unresolved
    • Whether PARVB protects other ITCH substrates is untested
    • Relevance of this mechanism outside the renal tubule is unknown
  5. 2024 Medium

    Identification of HIF-1α/HIF-2α as direct transcriptional activators of PARVB via a promoter HRE explained how PARVB becomes upregulated in hypoxic tumors and linked its expression to the oxygen-sensing network.

    Evidence ChIP on PARVB promoter HRE, hypoxia treatment, HIF-α reporter assays, PARVB silencing in melanoma xenografts

    PMID:38301409

    Open questions at the time
    • Whether the HRE is the sole hypoxia-responsive element in the PARVB locus was not determined
    • Post-transcriptional regulation of PARVB under hypoxia was not examined
  6. 2024 Medium

    Showing that elevated PARVB suppresses ILK–AKT signaling and promotes apoptosis in cochlear cells revealed a context-dependent inhibitory role for PARVB in the same ILK pathway it normally scaffolds.

    Evidence Fscn2 knockout mice, PARVB siRNA, PPAR-γ inhibitor, western blotting for ILK/p-AKT/Bcl-2/caspase-9 in HEI-OC1 cells

    PMID:38374196

    Open questions at the time
    • Direct physical interaction between PARVB and ILK was assumed but not tested in this system
    • Whether PPAR-γ-driven PARVB upregulation occurs outside cochlear cells is unclear
    • Dose-dependency of PARVB's inhibitory vs. scaffolding effects on ILK was not resolved
  7. 2025 Medium

    Establishing PARVB as the effector required for enhanced macropinocytosis and migration in PALB2-mutated breast epithelial cells linked this cytoskeletal scaffold to oncogenic nutrient uptake.

    Evidence siRNA knockdown in isogenic PALB2-mutant vs. control breast epithelial lines; dextran-uptake macropinocytosis assay, migration assays, 3D spheroid morphology

    PMID:40730089

    Open questions at the time
    • Molecular mechanism connecting PALB2 loss to PARVB upregulation or activation is unknown
    • Whether PARVB directly regulates membrane ruffling machinery for macropinocytosis was not determined

Open questions

Synthesis pass · forward-looking unresolved questions
  • Major open questions include how PARVB's dual scaffolding and signaling functions are coordinated across tissue contexts, what structural features allow PARVB to compete with ITCH for TAK1 binding, and whether PARVB directly modulates GEF activity of ARHGEF6 or merely recruits it.
  • No structural model of PARVB in complex with any binding partner exists
  • Tissue-specific knockout phenotypes beyond kidney are largely unexplored
  • The relationship between PARVB's integrin-scaffold and TAK1-stabilization functions has not been addressed

Mechanism profile

Synthesis pass · controlled-vocabulary classification · explore literature graph →
Molecular activity
GO:0060090 molecular adaptor activity 2
Localization
GO:0005829 cytosol 2 GO:0005886 plasma membrane 1
Pathway
R-HSA-162582 Signal Transduction 4 R-HSA-168256 Immune System 2

Evidence

Reading pass · 8 per-paper findings extracted from the source corpus
Year Finding Method Journal Conf PMIDs
2003 PARVB (beta-parvin) physically interacts with ARHGEF6 (alphaPIX), requiring both the N-terminal calponin homology (CH) domain and C-terminal coiled-coil domain of ARHGEF6. The two proteins co-localize at lamellipodia and ruffles in cells spreading on fibronectin, linking PARVB to integrin-mediated Rac1/Cdc42 signaling. Yeast two-hybrid screen, co-immunoprecipitation, GST pull-down, immunofluorescence co-localization; domain mapping via mental-retardation deletion mutants of ARHGEF6 Human molecular genetics High 12499396
2014 PARVB knockdown in tongue squamous cell carcinoma cells causes significant decreases in cell migration and wound healing, demonstrating a direct role for PARVB in cell motility through actin reorganization and focal adhesions. siRNA knockdown in vitro, migration assay, wound-healing assay British journal of cancer Medium 25422907
2021 PARVB promotes GBM cell proliferation, migration, and invasion partially through the JAK2/STAT3 pathway, inducing epithelial-mesenchymal transition (EMT). In vitro functional assays (proliferation, migration, invasion), pathway inhibitor/reporter assays for JAK2/STAT3 in glioblastoma cell lines Frontiers in oncology Medium 34568031
2024 PARVB associates with TAK1 (TGF-β-activated kinase 1) and prevents the E3 ubiquitin ligase ITCH from binding TAK1, thereby blocking TAK1 ubiquitination and degradation. PARVB deficiency (Cre-LoxP proximal tubule-specific knockout) promotes ITCH-dependent TAK1 degradation, inhibits TAK1 downstream signaling, and alleviates cisplatin-induced tubular cell death and inflammation. Conditional knockout mouse (Cre-LoxP), co-immunoprecipitation (PARVB–TAK1, ITCH–TAK1), ubiquitination assay, rescue experiments (PARVB or TAK1 restoration in KO cells), in vitro cell death/inflammation readouts Cellular and molecular life sciences : CMLS High 39235496
2024 Elevated PARVB suppresses the ILK-AKT survival pathway: high PARVB correlates with decreased ILK, p-ILK, p-AKT, and Bcl-2 levels and increased apoptosis (cleaved Caspase-9) in cochlear cells. Mechanistically, FSCN2 normally binds PPAR-γ to prevent its nuclear translocation; loss of FSCN2 allows PPAR-γ to enter the nucleus and upregulate PARVB, which then inhibits ILK-AKT signaling and promotes cell death. Inhibition of PARVB or overexpression of FSCN2 restores ILK-AKT signaling and cell viability. Fscn2 knockout mice, microarray, western blotting, siRNA knockdown of PARVB, overexpression of FSCN2, PPAR-γ inhibitor (GW9662), cell proliferation and migration assays in HEI-OC1 cells Cell death discovery Medium 38374196
2024 HIF-1α and HIF-2α transcriptionally upregulate PARVB expression under hypoxic conditions by binding to a hypoxia-responsive element (HRE) in the PARVB promoter. Elevated PARVB in turn promotes melanoma cell proliferation, migration, and invasion in vitro and tumor growth in vivo; silencing PARVB reverses these effects. Hypoxia treatment, HIF-1α/2α reporter/ChIP on PARVB promoter HRE, PARVB silencing (in vitro proliferation/migration/invasion assays), in vivo xenograft model Translational oncology Medium 38301409
2025 PARVB is required for enhanced cell migration and macropinocytosis in PALB2-mutated breast epithelial cells; knockdown of PARVB reduces migration, reverses morphological abnormalities of PALB2-mutated spheroids, and abolishes the macropinocytosis enhancement, demonstrating a β-parvin-dependent mechanism for oncogenic properties downstream of PALB2 loss. siRNA knockdown in isogenic PALB2-mutated vs. control cell lines, migration assays, 3D spheroid morphology, macropinocytosis assay (dextran uptake) Biochemical and biophysical research communications Medium 40730089
2025 PARVB activates the SMAD3 signaling axis to upregulate TNFSF13, promoting M2 macrophage polarization and regulatory T-cell induction, thereby creating an immunosuppressive tumor microenvironment in cervical cancer. Integrative transcriptomic/single-cell RNA-seq analysis, functional assays, multiplex immunohistochemistry; PARVB-SMAD3-TNFSF13 pathway validated in cell-based assays Laboratory investigation Low 40744226

Source papers

Stage 0 corpus · 14 papers · ranked by NIH iCite citations
Year Title Journal Citations PMID
2013 Genome-wide scan revealed that polymorphisms in the PNPLA3, SAMM50, and PARVB genes are associated with development and progression of nonalcoholic fatty liver disease in Japan. Human genetics 164 23535911
2003 Interaction of alphaPIX (ARHGEF6) with beta-parvin (PARVB) suggests an involvement of alphaPIX in integrin-mediated signaling. Human molecular genetics 104 12499396
2015 Targeted-bisulfite sequence analysis of the methylation of CpG islands in genes encoding PNPLA3, SAMM50, and PARVB of patients with non-alcoholic fatty liver disease. Journal of hepatology 70 25776890
2014 PARVB overexpression increases cell migration capability and defines high risk for endophytic growth and metastasis in tongue squamous cell carcinoma. British journal of cancer 30 25422907
2014 Targeted next-generation sequencing and fine linkage disequilibrium mapping reveals association of PNPLA3 and PARVB with the severity of nonalcoholic fatty liver disease. Journal of human genetics 18 24621583
2021 Construction of Novel Methylation-Driven Gene Model and Investigation of PARVB Function in Glioblastoma. Frontiers in oncology 11 34568031
2015 Association of rs5764455 and rs6006473 polymorphisms in PARVB with liver damage of nonalcoholic fatty liver disease in Han Chinese population. Gene 11 26343796
2021 Interaction of SAMM50-rs738491, PARVB-rs5764455 and PNPLA3-rs738409 Increases Susceptibility to Nonalcoholic Steatohepatitis. Journal of clinical and translational hepatology 10 35528982
2013 Pathway analysis using genome-wide association study data for coronary restenosis--a potential role for the PARVB gene. PloS one 9 23950981
2024 PARVB promotes malignant melanoma progression and is enhanced by hypoxic conditions. Translational oncology 3 38301409
2024 Inhibition of the ILK-AKT pathway by upregulation of PARVB contributes to the cochlear cell death in Fascin2 gene knockout mice. Cell death discovery 3 38374196
2024 PARVB deficiency alleviates cisplatin-induced tubular injury by inhibiting TAK1 signaling. Cellular and molecular life sciences : CMLS 3 39235496
2025 PALB2 mutations increase oncogenic properties of breast epithelial cells by enhancing JAM3 and PARVB expression. Biochemical and biophysical research communications 0 40730089
2025 Potential Role of PARVB in Macrophage-Mediated Immunosuppression and Cervical Cancer Progression. Laboratory investigation; a journal of technical methods and pathology 0 40744226