| 2001 |
NUB1 was identified as an interferon-inducible protein that interacts with NEDD8 (ubiquitin-like protein) via yeast two-hybrid screening and down-regulates NEDD8 expression through a post-transcriptional mechanism. NUB1 is predominantly localized in the nucleus and overexpression causes severe reduction of NEDD8 monomer and conjugates. |
Yeast two-hybrid screening, western blot, overexpression in U2OS cells |
The Journal of biological chemistry |
Medium |
11259415
|
| 2001 |
NUB1 possesses a ubiquitin-like (UBL) domain at its N-terminus and binds to S5a (PSMD4) of the 19S proteasome (PA700). GST pull-down assays showed that NUB1 overexpression increases precipitation of NEDD8 conjugates with GST-S5a, and proteasome inhibitors block NUB1-mediated down-regulation of NEDD8 — indicating NUB1 acts as an adaptor that recruits NEDD8 and its conjugates to the proteasome for degradation. |
GST pull-down assay, proteasome inhibitor treatment, overexpression studies |
The Journal of biological chemistry |
High |
11585840
|
| 2003 |
A splicing variant of NUB1, NUB1L, possesses an additional 14-amino-acid insertion encoding a UBA domain, giving it an extra NEDD8-binding site. Mutational studies identified a conserved sequence A(X4)L(X10)L(X3)L in NEDD8-binding sites where at least three Leu residues are required for NEDD8 binding. The C-terminal NEDD8-binding site of both NUB1 and NUB1L is primarily responsible for down-regulation of NEDD8, while the UBA2 domain of NUB1L is minimally or not involved in this activity. |
Mutagenesis, structural/domain analysis, functional down-regulation assays |
The Journal of biological chemistry |
High |
12816948
|
| 2002 |
NUB1 physically interacts with AIPL1 (aryl hydrocarbon receptor-interacting protein-like 1), as demonstrated by yeast two-hybrid and co-immunoprecipitation in Y79 retinoblastoma cells. |
Yeast two-hybrid, co-immunoprecipitation in Y79 cells |
Human molecular genetics |
Medium |
12374762
|
| 2004 |
AIPL1 modulates the nuclear translocation of NUB1: co-transfection of AIPL1 with GFP-NUB1 shifted NUB1 distribution toward the cytoplasm. AIPL1 also suppressed inclusion formation by NUB1 fragments in a chaperone-like manner. C-terminal truncation of AIPL1 abolished this effect, and the interaction requires residues 181–330 of AIPL1. |
Co-transfection with GFP-fusion proteins, fluorescence imaging, domain deletion analysis |
The Journal of biological chemistry |
Medium |
15347646
|
| 2004 |
Several LCA-associated mutations of AIPL1 located between residues 181–330 abolish interaction with NUB1 as demonstrated by three independent interaction assays, while other AIPL1 mutants retain NUB1 binding. |
Three independent interaction assays (yeast two-hybrid, co-IP, and in vitro binding) |
Biochemical and biophysical research communications |
Medium |
15081406
|
| 2005 |
NUB1 directly interacts with the proteasome subunit S5a through its C-terminal region (residues 536–584), NOT through its UBL domain. The UBL domain is not an S5a-binding motif in NUB1 but is required for NUB1 function. |
In vitro GST pull-down assay, yeast two-hybrid assay, deletion mapping |
Biochemical and biophysical research communications |
Medium |
16171779
|
| 2006 |
NUB1 physically interacts with synphilin-1 through its NEDD8-binding site and promotes proteasomal degradation of synphilin-1. Overexpression of NUB1 suppresses formation of synphilin-1-positive inclusions in HEK293 cells, and this effect is blocked by proteasome inhibitors. |
Co-transfection/co-immunoprecipitation, biochemical proteasome inhibitor assay, inclusion formation assay in HEK293 cells |
The American journal of pathology |
Medium |
16877356
|
| 2009 |
FAT10-mediated proteasomal degradation occurs independently of polyubiquitylation: purified 26S proteasome degraded FAT10-DHFR but not ubiquitin-DHFR in vitro. Critically, degradation of FAT10-DHFR by the 26S proteasome required NUB1L; knockdown of NUB1L attenuated FAT10-DHFR degradation in intact cells. |
In vitro reconstituted degradation assay with purified 26S proteasome, siRNA knockdown in cells |
FEBS letters |
High |
19166848
|
| 2010 |
NUB1 controls the subcellular localization of p53: NUB1 expression leads to decreased NEDDylation of p53, stimulation of p53 ubiquitination by Mdm2, and cytoplasmic localization of p53 with inhibition of its transcriptional activity. This requires cooperation between NEDD8 and ubiquitin pathways. |
Overexpression, co-immunoprecipitation, subcellular fractionation/imaging, transcription reporter assays |
Oncogene |
Medium |
20101219
|
| 2012 |
NUB1L and FAT10 bind to the 26S proteasome via the VWA domain of hRpn10/S5a; NUB1L can also bind Rpn1/S2. Depletion of hRpn10 in human cells causes accumulation of FAT10-conjugates. Functional reconstitution in Rpn10-deficient yeast showed the VWA domain of hRpn10 suffices for FAT10 degradation. |
Co-IP, yeast functional complementation, siRNA knockdown, domain mapping |
Nature communications |
High |
22434192
|
| 2012 |
NUB1 interacts with both tau and GSK3β, disrupts their interaction, abolishes recruitment of GSK3β to tau inclusions, reduces GSK3β-mediated phosphorylation of tau, and promotes GSK3β degradation. The UBL domain of NUB1 is required for GSK3β degradation but not for the interaction with tau/GSK3β. The UBA domain is required for NUB1 to interact with and degrade GSK3β and suppress tau aggregation. NUB1 silencing stabilizes endogenous GSK3β and exacerbates tau phosphorylation. |
Co-immunoprecipitation, domain deletion mutagenesis, siRNA silencing, tau aggregation assay, phosphorylation assays |
Human molecular genetics |
High |
22965877
|
| 2013 |
NUB1 overexpression reduces mutant huntingtin (mHTT) levels by enhancing polyubiquitination and proteasomal degradation of mHTT. This process requires CUL3 and NEDD8 (required for CUL3 activation). Interferon-β lowers mHTT and rescues neuronal toxicity through induction of NUB1. |
Genome-wide RNAi screen, Drosophila in vivo validation, proteasome inhibitor studies, ubiquitination assays in neuronal models |
Nature neuroscience |
High |
23525043
|
| 2013 |
NUB1L promotes transfer of NEDD8 to the proteasome for degradation by directly recognizing NEDD8 at its key residue Asn-51 and interacting with P97/VCP via a positively charged VCP-binding motif. NUB1L coordinates with the P97-UFD1-NPL4 complex for NEDD8 delivery to the proteasome. NUB1L does not interact with ubiquitin. |
Co-immunoprecipitation, mutagenesis (Asn-51), in vitro binding assays |
The Journal of biological chemistry |
Medium |
24019527
|
| 2015 |
NUB1L suppresses atypical neddylation (ubiquitin enzyme-mediated NEDD8 conjugation) and promotes degradation of misfolded proteins by the proteasome. Loss of NUB1L exaggerates atypical neddylation; NUB1L overexpression represses it via promoting NEDD8 degradation. NUB1L depletion accumulates the cardiomyopathy-linked misfolded protein CryAB(R120G), and NUB1L overexpression promotes its degradation by suppressing neddylation of ubiquitinated proteins. |
siRNA knockdown, overexpression, GFPu degradation assay, western blotting in cardiomyocytes |
The Journal of biological chemistry |
Medium |
26260793
|
| 2017 |
Mdm2 E3 ubiquitin ligase is a NUB1-interacting protein that induces non-proteolytic di-ubiquitination of NUB1 specifically on lysine 159. This di-ubiquitination positively regulates NUB1 function: mutation of Lys-159 to Arg impairs NUB1's negative regulation of Nedd8 and neddylated proteins. Mdm2 thus acts as a positive regulator of NUB1. |
Co-immunoprecipitation, site-directed mutagenesis (K159R), ubiquitination assays |
PloS one |
Medium |
28099510
|
| 2019 |
Phosphorylation of NUB1 at serine 46 (P-NUB46) creates a phosphomimetic mutant that more efficiently degrades aggregates in a cell-based assay. Antibodies specific to P-NUB46 react with Lewy bodies in PD/DLB but not with glial cytoplasmic inclusions in MSA, indicating phosphorylation modulates NUB1 activity during synucleinopathy pathology. |
Phosphomimetic mutagenesis, cell-based aggregate degradation assay, immunohistochemistry |
Brain pathology (Zurich, Switzerland) |
Medium |
31006160
|
| 2023 |
FAT10 and NUB1L cooperate to activate the 26S proteasome: FAT10 binds to the UBA domains of NUB1L and interferes with NUB1L dimerization, which increases NUB1L's affinity for the proteasomal subunit RPN1. Together, FAT10 and NUB1L facilitate gate opening of the 20S proteasome and activate all peptidolytic activities of the 26S proteasome in a ubiquitin- and USP14-independent manner. |
In vitro proteasome activity assays, co-immunoprecipitation, domain interaction studies |
Life science alliance |
High |
37188463
|
| 2024 |
NUB1 reduction in hepatocellular carcinoma upregulates NEDD8, which promotes NEDDylation of PCNA at lysine 164. This NEDDylation antagonizes PCNA K48-linked polyubiquitination and thereby stabilizes PCNA protein, promoting tumor cell growth. The NEDDylation inhibitor TAS4464 reversed this by decreasing PCNA NEDDylation. |
Knockdown/overexpression experiments, site-specific mutagenesis (Lys164), in vitro and in vivo xenograft assays, western blotting |
Cell death & disease |
Medium |
40164590
|
| 2025 |
NUB1 traps the N-terminal ubiquitin-like domain of FAT10 in an unfolded state and delivers it to the 26S proteasome for engagement via the Rpn1 subunit, enabling ubiquitin-independent and p97-independent degradation of FAT10-ylated substrates. Cryo-EM revealed a highly dynamic NUB1 complex bound to Rpn1 during FAT10 delivery and early ATP-dependent degradation. Hydrogen-deuterium exchange and site-directed mutagenesis defined the FAT10-NUB1 interaction complex that activates NUB1 for proteasome docking. |
In vitro reconstitution with purified human components, hydrogen-deuterium exchange mass spectrometry, cryo-EM, site-directed mutagenesis, structural modeling |
Nature structural & molecular biology |
High |
40217121
|
| 2024 |
NUB1 overexpression decreases NF-κB nuclear translocation and IL-6 mRNA in IL-1β-stimulated rheumatoid arthritis fibroblast-like synoviocytes (FLS), placing NUB1 as a negative regulator of NF-κB-mediated inflammatory signaling through the neddylation/CUL1 axis. |
Overexpression vector transfection, NF-κB nuclear translocation assay, RT-PCR for IL-6 mRNA in RA FLS |
Arthritis & rheumatology (Hoboken, N.J.) |
Medium |
38566346
|
| 2004 |
NUB1 interacts with the ubiquitin precursor UbC1 (composed of nine tandem ubiquitin repeats linked by alpha-peptide bonds) through its UBA domain. The UBA domain binds alpha-peptide bond-linked polyubiquitin but not isopeptide bond-linked polyubiquitin. An unidentified ubiquitin C-terminal hydrolase co-immunoprecipitates with NUB1, suggesting NUB1 recruits UbC1 to this hydrolase complex for processing into ubiquitin monomers. |
Yeast two-hybrid, co-immunoprecipitation, domain-specific binding assays |
European journal of biochemistry |
Medium |
15009209
|