| 2019 |
NIPSNAP1 (and NIPSNAP2) accumulate on the mitochondrial surface upon mitochondrial depolarization, where they recruit autophagy receptors and ATG8 proteins to function as 'eat me' signals for mitophagy. NIPSNAP1 and NIPSNAP2 have redundant functions in mitophagy. Zebrafish lacking functional Nipsnap1 show reduced mitophagy in the brain and parkinsonian phenotypes including loss of dopaminergic neurons, reduced motor activity, and increased oxidative stress. |
Cell imaging, protein localization assays, Co-IP/pulldown for ATG8 and autophagy receptor interactions, zebrafish knockout model with behavioral and histological readouts |
Developmental cell |
High |
30982665
|
| 2008 |
NIPSNAP1 was identified as a novel auxiliary protein that inhibits TRPV6 ion channel activity. Pull-down assays confirmed physical interaction; electrophysiological recordings showed NIPSNAP1 abolishes TRPV6 currents. Biotinylation assays demonstrated that TRPV6 plasma membrane expression did not change in the presence of NIPSNAP1, indicating the inhibition is independent of reduced cell-surface channel expression. |
Bioinformatics, pull-down assay, electrophysiology (patch-clamp), biotinylation surface expression assay, RT-PCR, immunohistochemistry |
Pflugers Archiv : European journal of physiology |
Medium |
18392847
|
| 2012 |
NIPSNAP1 was identified as a cell-surface interacting protein for the neuropeptide nocistatin (NST) in synaptosomal membranes. The N-terminal truncated 29-kDa form (not the 33-kDa precursor) interacts with NST and is present on the cell surface and in synaptic membranes/mitochondria. NIPSNAP1-deficient mice completely lack NST-mediated inhibition of N/OFQ-evoked tactile allodynia, establishing NIPSNAP1 as required for NST pain-modulating function. |
High-performance affinity latex bead pulldown from synaptosomal membranes, NIPSNAP1-deficient mouse behavioral assays (tactile allodynia), protein fractionation/Western blot |
The Journal of biological chemistry |
Medium |
22311985
|
| 2010 |
NIPSNAP1 is localized to the mitochondrial matrix in neurons. In vitro binding assays showed NIPSNAP1 binds to the branched-chain alpha-keto acid (BCKA) dehydrogenase complex components (dihydrolipoyl-transacylase and -transacetylase) and pyruvate dehydrogenase complex components. NIPSNAP1 expression is restricted to neurons (pyramidal, Purkinje, motor, dopaminergic, and noradrenergic neurons) in rat nervous system. |
Subcellular fractionation, in vitro binding assay, immunohistochemistry, immunofluorescence |
The European journal of neuroscience |
Medium |
20646061
|
| 2010 |
NIPSNAP1 interacts with amyloid precursor protein (APP) family members. The interaction was confirmed in transiently transfected COS7 cells and in mouse brain. NIPSNAP1 is targeted to mitochondria via its N-terminal targeting sequence and interacts with the outer mitochondrial membrane chaperone TOM22. APP overexpression disrupts NIPSNAP1 mitochondrial localization and downregulates NIPSNAP1 levels in cultured cells. |
Co-immunoprecipitation in transfected COS7 cells and mouse brain lysates, mitochondrial targeting sequence analysis, Western blot |
The European journal of neuroscience |
Medium |
20497468
|
| 2016 |
NIP-SNAP-1 and NIP-SNAP-2 are maintained by HSP60 chaperone activity. Co-immunoprecipitation identified HSP60 and p62/SQSTM1 as binding partners. Native gel electrophoresis and filter trap assays showed human HSP60 prevented aggregation of newly synthesized NIP-SNAP-2 in an in vitro translation system. HSP60 knockdown decreased NIP-SNAP-1 and -2 expression levels. NIP-SNAP-1 and -2 localize to the mitochondrial inner membrane space, while HSP60 localizes to the matrix. |
Co-immunoprecipitation, native gel electrophoresis, filter trap assay, in vitro translation system, siRNA knockdown, subcellular fractionation |
Biochemical and biophysical research communications |
Medium |
28011268
|
| 2016 |
NIPSNAP1 (NIP-SNAP-1) was identified as a clarithromycin (CAM)-binding protein using CAM-conjugated Sepharose affinity pulldown. Knockdown of NIP-SNAP-1 or -2 suppressed LPS-induced IL-8 and IL-6 production and NF-κB activity in epithelial cell lines, revealing NIPSNAP1 role in NF-κB-mediated cytokine production. |
Affinity pulldown with drug-conjugated Sepharose, proteome analysis, siRNA knockdown, cytokine ELISA, NF-κB reporter assay |
Biochemical and biophysical research communications |
Medium |
27998764
|
| 2021 |
Phosphorylated FUNDC1 (driven by reduced NLRX1 expression) cannot interact with NIPSNAP1 and NIPSNAP2 on the outer membrane of damaged mitochondria, thereby failing to initiate mitophagy. This was demonstrated by immunoprecipitation showing the FUNDC1–NIPSNAP1/2 interaction is phosphorylation-dependent, placing NIPSNAP1 downstream of the NLRX1–FUNDC1 axis in mitophagy signaling. |
Co-immunoprecipitation, Western blot, siRNA knockdown, in vitro and in vivo overexpression models |
Cell proliferation |
Medium |
33432610
|
| 2023 |
SIRT3, a mitochondrial deacetylase, specifically deacetylates NIPSNAP1 and PINK1 to regulate mitophagy in liver fibrosis. SIRT3 knockout deepened liver fibrosis severity. Simultaneous interference with NIPSNAP1 (or PINK1) and SIRT3 overexpression disrupted SIRT3's beneficial effects on mitophagy and fibrosis, establishing NIPSNAP1 as a downstream effector of SIRT3 deacetylation. |
SIRT3 KO mouse model, siRNA knockdown, protein overexpression, LC3-II/I and p62 assay, colocalization (TOM20/LAMP1), acetylation analysis |
Journal of cellular physiology |
Medium |
37417912
|
| 2023 |
NIPSNAP1 prevents senescence in cancer cells through dual mechanisms: (1) it sequesters the E3 ubiquitin ligase FBXL14 to prevent proteasome-mediated c-Myc turnover, and (2) it promotes interaction between SIRT3 and SOD2 to maintain ROS below the threshold needed to induce cell cycle arrest. NIPSNAP1 levels are themselves subject to transcriptional repression by the c-Myc–Miz1 complex, forming a feedback loop. |
Mass spectrometry proteomics, RNAi knockdown, Co-IP (NIPSNAP1-FBXL14, SIRT3-SOD2), luciferase reporter assay, proteasome degradation assay, flow cytometry (ROS), xenograft model |
Journal of translational medicine |
Medium |
37340421
|
| 2023 |
Nipsnap1 localizes to the mitochondrial matrix in brown adipose tissue (BAT), increases expression in response to cold and β3-adrenergic stimulation, and is required for long-term non-shivering thermogenesis maintenance. Nipsnap1 knockout mice cannot sustain cold-induced energy expenditure or normal body temperature and show severe defects in beta-oxidation capacity, linking NIPSNAP1 to lipid metabolism in BAT. |
Nipsnap1 knockout mouse generation, whole-body respirometry, cellular and mitochondrial respiration assay, immunoblotting, RT-qPCR |
Molecular metabolism |
Medium |
37423391
|
| 2016 |
NIPSNAP1-deficient mice show increased nociceptive responses in the late phase of the formalin test and exacerbated prolonged inflammatory pain (carrageenan and CFA models), with enhanced phosphorylation of ERK in the spinal dorsal horn. Prostaglandin E2 stimulates NIPSNAP1 mRNA expression via the cAMP-PKA signaling pathway in dorsal root ganglion cells. |
NIPSNAP1 KO mice, formalin/carrageenan/CFA behavioral pain models, Western blot (p-ERK), in situ hybridization, pharmacological treatment of isolated DRG cells |
Molecular pain |
Medium |
27030720
|
| 2025 |
Nipsnap1 interacts with proteins involved in both mitochondrial and peroxisomal fatty acid beta-oxidation in brown adipocytes, including solute carrier family 25 member 20 and enoyl-CoA hydratase/3-hydroxyacyl-CoA dehydrogenase. Adipose-specific overexpression of Nipsnap1 increases energy expenditure by ~20% through lipid utilization and increases beta-oxidation by ~39% in primary brown adipocytes. |
Immunoprecipitation-mass spectrometry protein-protein network mapping, AAV-mediated adipose-specific overexpression, metabolic cage respirometry, Seahorse mitochondrial respiration assay |
The Journal of nutrition |
Medium |
40412760
|
| 2025 |
UBE4B is an E3 ubiquitin ligase for NIPSNAP1 that catalyzes NIPSNAP1 ubiquitination in HEK293T and HeLa cells under mitochondrial depolarization, promoting lysosome-dependent NIPSNAP1 degradation and enhancing interaction of NIPSNAP1 with autophagy adaptors NDP52 and p62/SQSTM1. UBE4B-mediated NIPSNAP1 ubiquitination facilitates mitophagy in Parkin-null HeLa cells specifically through strengthening NIPSNAP1–NDP52 binding. Parkin does not ubiquitinate NIPSNAP1. |
Co-immunoprecipitation, ubiquitination assay in HEK293T and HeLa cells, Parkin-null cell line, lysosome inhibition assay, mitophagy reporter assay |
International journal of molecular sciences |
Medium |
41596759
|
| 2025 |
Loss of NIPSNAP1 and NIPSNAP2 (double knockout mice) impairs mitochondrial function and enhances glycolysis but does NOT affect mitophagy despite significant Parkin accumulation, suggesting NIPSNAP1/2 role in mitochondrial quality control is not solely through mitophagy. DKO mice show accelerated aging phenotypes including reduced muscle strength, fibrosis, and inflammation. |
Nipsnap1/2 double knockout mouse, mitochondrial function assays, mitophagy flux assay (Parkin accumulation), RNA-seq, metabolic and aging phenotyping |
Metabolism: clinical and experimental |
Medium |
40517951
|
| 2025 |
IGF2BP2 functions as an m6A reader that binds NIPSNAP1 mRNA and regulates its stability. NIPSNAP1 overexpression promotes mitophagy and maintains mitochondrial dynamics in hepatic ischemia-reperfusion, while NIPSNAP1 knockdown impairs mitophagy and disrupts mitochondrial dynamics. |
AAV-mediated gene overexpression in vivo, siRNA knockdown, hypoxia/reoxygenation cell model, mitophagy assay, mitochondrial dynamics imaging, RNA-binding protein pulldown/m6A analysis |
World journal of gastroenterology |
Low |
40539202
|
| 2024 |
NIPSNAP1 and NIPSNAP2 knockdown reduces mitochondrial oxygen consumption rate (OCR) and impairs TLR4-mediated IL-8 production, linking NIPSNAP1/2 to mitochondrial quality control supporting cytokine signaling. However, individual or double KO of NIPSNAP1/2 did not impair IL-8 secretion or OCR, indicating compensation or off-target effects in the KD experiments. Clarithromycin suppresses IL-8 production by reducing OCR via functional inhibition of NIPSNAP1 and 2. |
RNA interference KD, CRISPR KO, Seahorse OCR assay, cytokine ELISA, TLR4 stimulation |
Scientific reports |
Low |
38287119
|