Affinage

MTNR1A

Melatonin receptor type 1A · UniProt P48039

Length
350 aa
Mass
39.4 kDa
Annotated
2026-04-29
56 papers in source corpus 9 papers cited in narrative 9 extracted findings

Mechanistic narrative

Synthesis pass · prose summary of the discoveries below

MTNR1A encodes the MT1 melatonin receptor, a G protein-coupled receptor that transduces melatonin signals to regulate circadian physiology, photoreceptor survival, steroidogenesis, and anti-apoptotic programs. Ligand binding triggers β-arrestin 2-dependent receptor internalization coupled to PKA and ERK phosphorylation, and conserved transmembrane residues are required for G protein-coupled signaling activation (PMID:25613019, PMID:33095446). MTNR1A mRNA is post-transcriptionally stabilized by cytoplasmic hnRNPL, which binds CA-repeat elements in the coding region and shields the transcript from EXOSC10-mediated degradation, linking receptor abundance to CREB phosphorylation in renal tubular cells (PMID:32730662). The receptor exhibits tissue-specific diurnal expression patterns, is subject to epigenetic silencing by promoter CpG methylation in oral squamous-cell carcinoma—where its re-expression inhibits tumor cell growth—and its loss of function causes rod photoreceptor degeneration in Xenopus retina (PMID:15470001, PMID:18452558, PMID:32792587).

Mechanistic history

Synthesis pass · year-by-year structured walk · 5 steps
  1. 2004 Medium

    Establishing that MTNR1A transcript levels are not uniform but exhibit tissue-specific diurnal rhythms—opposite in the premammillary hypothalamus versus the pars tuberalis—revealed that the receptor itself is a dynamically regulated component of circadian physiology, not merely a passive melatonin-binding site.

    Evidence RT-PCR and in situ hybridization with 35S-labeled riboprobe in ovine brain, day-night comparison

    PMID:15470001

    Open questions at the time
    • Mechanism driving tissue-specific diurnal transcription not identified
    • No causal manipulation linking MTNR1A rhythm to downstream physiology
  2. 2008 Medium

    Demonstrating that MTNR1A is epigenetically silenced by promoter CpG methylation in oral squamous-cell carcinoma, and that demethylation restores expression and inhibits cell growth, established the receptor as a tumor-suppressive locus subject to epigenetic inactivation.

    Evidence Bisulfite sequencing, 5-aza-2′-deoxycytidine demethylation, and exogenous MTNR1A re-expression with growth assay in OSCC cell lines

    PMID:18452558

    Open questions at the time
    • Downstream signaling pathway mediating growth suppression not characterized
    • Generalizability to other cancer types not tested in this study
  3. 2015 Medium

    Live-cell FRET imaging resolved the mechanism of melatonin-activated MTNR1A signaling by showing that β-arrestin 2 physically associates with the receptor upon ligand binding to drive internalization and downstream PKA/ERK phosphorylation, and that valproic acid disrupts this interaction.

    Evidence FRET imaging of YFP-β-arrestin 2 and CFP-MTNR1A in HEK-293 and Neuro-2a cells, phospho-PKA and phospho-ERK assays

    PMID:25613019

    Open questions at the time
    • Gα subtype coupling not directly tested
    • Endogenous β-arrestin 2 dependence not validated by knockdown
  4. 2017 Medium

    siRNA knockdown of MTNR1A in bovine granulosa cells revealed that the receptor mediates melatonin's dual anti-apoptotic and steroidogenic functions, as its loss increased pro-apoptotic gene expression and reduced progesterone/estradiol production.

    Evidence siRNA knockdown in bovine granulosa cells with qRT-PCR, Western blot, and ELISA readouts

    PMID:28805353

    Open questions at the time
    • Contribution of MTNR1B not fully excluded
    • Intracellular signaling cascade linking receptor to apoptotic gene regulation not mapped
  5. 2020 High

    Three studies collectively deepened understanding of MTNR1A's molecular determinants and physiological necessity: hnRNPL was identified as a post-transcriptional stabilizer of MTNR1A mRNA via CA-repeat binding that protects against EXOSC10 degradation; conserved transmembrane residues were shown to be required for G protein signaling; and CRISPR knockout in Xenopus demonstrated that MTNR1A is essential for rod photoreceptor survival.

    Evidence RIP and RNAi screen in renal cells (hnRNPL/EXOSC10); site-directed mutagenesis with yeast GPCR biosensor; CRISPR/Cas9 knockout with retinal histology in Xenopus tropicalis

    PMID:32730662 PMID:32792587 PMID:33095446

    Open questions at the time
    • Whether hnRNPL stabilization operates in tissues beyond renal tubular cells is unknown
    • Structural basis for how individual transmembrane mutations alter ligand binding vs. G protein coupling not resolved
    • Whether rod degeneration in Xenopus mtnr1a mutants reflects a conserved mammalian phenotype is untested

Open questions

Synthesis pass · forward-looking unresolved questions
  • The full intracellular signaling cascade from MTNR1A activation through specific Gα subtype coupling to transcriptional outputs remains incompletely mapped, and whether the hnRNPL-mediated mRNA stabilization mechanism operates broadly or is tissue-restricted is unresolved.
  • No high-resolution structure of activated MT1 with cognate G protein published in this timeline
  • Relative contributions of Gi, β-arrestin, and other effector arms not systematically dissected in a single cell system
  • Functional significance of promoter methylation in non-cancer contexts (e.g., circadian regulation) unexplored

Mechanism profile

Synthesis pass · controlled-vocabulary classification · explore literature graph →
Molecular activity
GO:0060089 molecular transducer activity 3
Localization
GO:0005886 plasma membrane 2
Pathway
R-HSA-162582 Signal Transduction 3 R-HSA-5357801 Programmed Cell Death 2 R-HSA-9909396 Circadian clock 1

Evidence

Reading pass · 9 per-paper findings extracted from the source corpus
Year Finding Method Journal Conf PMIDs
2015 Valproic acid (VPA) interferes with MTNR1A internalization kinetics after melatonin treatment in a β-arrestin 2-dependent manner: FRET imaging showed VPA reduced melatonin-initiated association between YFP-labeled β-arrestin 2 and CFP-labeled MTNR1A, and this was associated with decreased phosphorylation of PKA (Thr197) and ERK (Thr202/Tyr204), without altering whole-cell currents. Time-lapse confocal microscopy of MTNR1A-EGFP in HEK-293 and Neuro-2a cells, FRET imaging (YFP-β-arrestin 2 / CFP-MTNR1A), phosphorylation assays Molecular neurobiology Medium 25613019
2020 hnRNPL stabilizes MTNR1A mRNA post-transcriptionally in renal tubular cells: cytoplasmic hnRNPL binds CA-repeat elements in the MTNR1A coding region, protecting the transcript from degradation by EXOSC10 (exosome component 10). hnRNPL knockdown or overexpression altered CREB phosphorylation levels, and both hnRNPL and MTNR1A were reduced in tubular epithelial cells from experimental membranous nephropathy kidneys. RNA interference screening, RNA immunoprecipitation, hnRNPL knockdown/overexpression, CREB phosphorylation assays, mouse kidney diurnal expression analysis Journal of cellular physiology High 32730662
2020 CRISPR/Cas9-mediated deletion mutation of the mtnr1a (Mel1a) gene in Xenopus tropicalis causes loss of rod photoreceptors in developing heterozygous mutant retinas, with cones relatively spared, establishing a required role for MTNR1A signaling in rod photoreceptor survival during development. In vivo CRISPR/Cas9 genomic editing in Xenopus tropicalis, histological and immunofluorescence analysis of retinas Scientific reports Medium 32792587
2020 Site-directed mutagenesis of consensus sequence residues in human MTNR1A expressed in a yeast GPCR fluorescent biosensor (chimeric Gα + ZsGreen reporter) showed that most mutations in conserved positions significantly reduced signaling capacity, with some mutations differentially affecting MTNR1A vs. MTNR1B, identifying key residues for receptor activation. Site-directed mutagenesis, yeast GPCR fluorescent biosensor assay (chimeric Gα, ZsGreen reporter) Biotechnology and bioengineering Medium 33095446
2017 MTNR1A mediates melatonin's anti-apoptotic effects and regulation of steroidogenesis in bovine granulosa cells: MTNR1A knockdown increased pro-apoptotic gene expression (BAX, CASP3, TP53) and altered hormone-related gene expression (FSHR, LHR, INHA, INHBA, TGFBR3), and reduced progesterone and estradiol production, mirroring the opposite of melatonin treatment effects. siRNA knockdown of MTNR1A in bovine granulosa cells, qRT-PCR, ELISA for progesterone/estradiol, Western blot Molecular reproduction and development Medium 28805353
2025 NG-497 alleviates LPS-induced neuroinflammation in human microglia through elevation of MTNR1A protein levels (rather than through ATGL inhibition), and the MTNRs agonist Ramelteon exerts comparable anti-inflammatory effects, establishing MTNR1A as a functional mediator of anti-inflammatory and neuroprotective signaling in human microglia. Pharmacological treatment of human microglia with NG-497, MTNR1A protein quantification, LPS-induced pro-inflammatory cytokine assays, humanized in vitro neuroinflammation model Inflammation Low 39751706
2008 MTNR1A expression is epigenetically silenced in oral squamous-cell carcinoma (OSCC) via CpG island hypermethylation in its promoter region; treatment with 5-aza-2'-deoxycytidine restored MTNR1A mRNA expression in gene-silenced OSCC cells lacking homozygous deletion, and exogenous restoration of MTNR1A inhibited OSCC cell growth. Array-CGH, RT-PCR, bisulfite sequencing/methylation analysis, 5-aza-2'-deoxycytidine demethylation treatment, exogenous MTNR1A re-expression with growth assay Cancer science Medium 18452558
2016 A differentially methylated CpG site (cg02303933) within MTNR1A mediates the effect of a paternally inherited genetic variant (rs10009104 G allele) on comorbidity of asthma and allergic rhinitis, demonstrating that epigenetic regulation of MTNR1A via DNA methylation transmits parent-of-origin genetic effects on allergic disease. Genome-wide linkage scan, SNP association analysis in European families, DNA methylation association analysis (mediation analysis) The Journal of allergy and clinical immunology Low 27038909
2004 MTNR1A transcripts are expressed in the ovine premammillary hypothalamus (PMH) and exhibit a diurnal rhythm opposite to that in the pars tuberalis: MTNR1A mRNA expression is greater at the end of the night than at the end of the day in the PMH, whereas expression is lower at night in the pars tuberalis, suggesting tissue-specific diurnal regulation of the receptor. RT-PCR, in situ hybridization with 35S-labeled ovine MTNR1A riboprobe, day-night comparison Biology of reproduction Medium 15470001

Source papers

Stage 0 corpus · 56 papers · ranked by NIH iCite citations
Year Title Journal Citations PMID
2008 Frequent silencing of a putative tumor suppressor gene melatonin receptor 1 A (MTNR1A) in oral squamous-cell carcinoma. Cancer science 79 18452558
1995 Mapping of the gene for the Mel1a-melatonin receptor to human chromosome 4 (MTNR1A) and mouse chromosome 8 (Mtnr1a). Genomics 71 7558006
2004 MTNR1A melatonin receptors in the ovine premammillary hypothalamus: day-night variation in the expression of the transcripts. Biology of reproduction 39 15470001
2013 Association between genetic variations in MTNR1A and MTNR1B genes and gestational diabetes mellitus in Han Chinese women. Gynecologic and obstetric investigation 37 24157813
2012 Characterisation of the Melatonin Receptor 1A (MTNR1A) gene in the Rasa Aragonesa sheep breed: association with reproductive seasonality. Animal reproduction science 32 22809454
2017 MTNR1A and MTNR1B gene polymorphisms in women with gestational diabetes. Gynecological endocrinology : the official journal of the International Society of Gynecological Endocrinology 31 28084098
2017 The role of Melatonin receptor MTNR1A in the action of Melatonin on bovine granulosa cells. Molecular reproduction and development 29 28805353
2011 A polymorphism at the melatonin receptor 1A (MTNR1A) gene in Sarda ewes affects fertility after AI in the spring. Reproduction, fertility, and development 25 21211471
2018 SNP rs403212791 in exon 2 of the MTNR1A gene is associated with reproductive seasonality in the Rasa aragonesa sheep breed. Theriogenology 24 29475126
2008 Relationship between MTNR1A melatonin receptor gene polymorphism and seasonal reproduction in different goat breeds. Animal reproduction science 23 18243602
2008 Lack of association between the promoter polymorphism of the MTNR1A gene and adolescent idiopathic scoliosis. Spine 23 18794763
2016 DNA methylation within melatonin receptor 1A (MTNR1A) mediates paternally transmitted genetic variant effect on asthma plus rhinitis. The Journal of allergy and clinical immunology 22 27038909
2010 Effect of genotype at the MTNR1A locus and melatonin treatment on first conception in Sarda ewe lambs. Theriogenology 22 20708235
2011 The melatonin receptor 1A (MTNR1A) gene is associated with recurrent and idiopathic calcium nephrolithiasis. Nephrology, dialysis, transplantation : official publication of the European Dialysis and Transplant Association - European Renal Association 21 21652546
2020 Reproductive performance in three Slovenian sheep breeds with different alleles for the MTNR1A gene. Animal reproduction science 19 32414462
2016 Influences of melatonin treatment, melatonin receptor 1A (MTNR1A) and kisspeptin (KiSS-1) gene polymorphisms on first conception in Sarda ewe lambs. Reproduction, fertility, and development 18 25375207
2011 Characterization of the Mediterranean Italian buffaloes melatonin receptor 1A (MTNR1A) gene and its association with reproductive seasonality. Theriogenology 18 21497385
2014 Sequence analysis and identification of new variations in the coding sequence of melatonin receptor gene (MTNR1A) of Indian Chokla sheep breed. Meta gene 17 25606429
2018 Reproductive response to male joining with ewes with different allelic variants of the MTNR1A gene. Animal reproduction science 15 30553547
2008 Pig melatonin receptor 1a (MTNR1A) genotype is associated with seasonal variation of sow litter size. Animal reproduction science 15 19181464
2021 Detection of Polymorphisms in the MTNR1A Gene and Their Association with Reproductive Performance in Awassi Ewes. Animals : an open access journal from MDPI 14 33672405
2012 Association between melatonin receptor 1A (MTNR1A) gene polymorphism and the reproductive performance of Mediterranean Italian buffaloes. Reproduction, fertility, and development 14 22935159
2020 New polymorphisms at MTNR1A gene and their association with reproductive resumption in sarda breed sheep. Theriogenology 13 33049568
2018 Polymorphism of melatonin receptor (MTNR1A) gene and its association with seasonal reproduction in water buffalo (Bubalus bubalis). Animal reproduction science 12 30384994
2022 Expression and distribution of MTNR1A in the hypothalamus-pituitary-gonadal axis of Tibetan sheep during the estrous cycle. Gene 11 35835405
2020 Polymorphisms of the melatonin receptor 1A (MTNR1A) gene influence the age at first mating in autumn-born ram-lambs and sexual activity of adult rams in spring. Theriogenology 11 32799126
2019 Expression of MTNR1A, steroid (ERα, ERβ, and PR) receptor gene transcripts, and the concentration of melatonin and steroid hormones in the ovarian follicles of buffalo. Domestic animal endocrinology 11 31421986
2015 Valproic Acid Influences MTNR1A Intracellular Trafficking and Signaling in a β-Arrestin 2-Dependent Manner. Molecular neurobiology 11 25613019
2015 Assessment of Genetic Variability in the Coding Sequence of Melatonin Receptor Gene (MTNR1A) in Tropical Arid Sheep Breeds of India. Reproduction in domestic animals = Zuchthygiene 11 25708518
2010 Analysis of genetic variations in the human melatonin receptor (MTNR1A, MTNR1B) genes and antipsychotics-induced tardive dyskinesia in schizophrenia. The world journal of biological psychiatry : the official journal of the World Federation of Societies of Biological Psychiatry 10 20726823
2023 Melatonin receptor 1A (MTNR1A) gene linkage and association to type 2 diabetes in Italian families. European review for medical and pharmacological sciences 9 37259752
2021 MTNR1A gene polymorphisms and reproductive recovery after seasonal anoestrus in different Mediterranean sheep breeds. Animal reproduction science 9 34922186
2019 Genotype of MTNR1A gene regulates the conception rate following melatonin treatment in water buffalo. Theriogenology 9 30711643
2015 Characterization of MTNR1A gene in terms of genetic variability in a panel of subtemperate and subtropical Indian sheep breeds. Journal of genetics 9 26690527
2014 Association between melatonin receptor 1A (MTNR1A) gene single-nucleotide polymorphisms and the velvet antler yield of Sika deer. Molecular biology reports 9 24595444
2012 MTNR1A receptor expression in normal and pathological human salivary glands. Anticancer research 9 23155241
2023 Association of rotating night shift work, CLOCK, MTNR1A, MTNR1B genes polymorphisms and their interactions with type 2 diabetes among steelworkers: a case-control study. BMC genomics 8 37138267
2020 The MTNR1A mRNA is stabilized by the cytoplasmic hnRNPL in renal tubular cells. Journal of cellular physiology 8 32730662
2015 Association study and expression analysis of MTNR1A as a candidate gene for body measurement and meat quality traits in Qinchuan cattle. Gene 8 26067916
2023 Analysis of MTNR1A Genetic Polymorphisms and Their Association with the Reproductive Performance Parameters in Two Mediterranean Sheep Breeds. Animals : an open access journal from MDPI 7 36766337
2024 A novel p.127Val>Ile single nucleotide polymorphism in the MTNR1A gene and its relation to litter size in Thin-tailed Indonesian ewes. Animal bioscience 5 38938032
2022 Reproductive Resumption in Winter and Spring Related to MTNR1A Gene Polymorphisms in Sarda Sheep. Animals : an open access journal from MDPI 5 36359071
2019 No polymorphism of melatonin receptor 1A (MTNR1A) gene was found in Markhoz goat. Veterinary medicine and science 5 30735014
2023 Association of MTNR1A and GDF9 gene allelles with the reproductive performance, response to oestrus induction treatments and prolificacy, in improved and non-improved local indigenous sheep breeds. Reproduction in domestic animals = Zuchthygiene 3 37668279
2025 NG-497 Alleviates Microglia-Mediated Neuroinflammation in a MTNR1A-Dependent Manner. Inflammation 2 39751706
2023 MTNR1A and MTNR1B Gene Variants of the Melatonin Receptor and Arterial Stiffness in Persons without Arterial Hypertension. Bulletin of experimental biology and medicine 2 36892670
2020 CRISPR/Cas9 mediated mutation of the mtnr1a melatonin receptor gene causes rod photoreceptor degeneration in developing Xenopus tropicalis. Scientific reports 2 32792587
2019 Variation near MTNR1A associates with early development and interacts with seasons. Journal of sleep research 2 31588999
2006 [Effects of MTNR1A gene on litter size in a large white and a landrace herd]. Yi chuan = Hereditas 2 16825166
2022 Assessment of the cellular integrity and expression of melatonin receptor (MTNR1A) in the retina assaulted by ethanol and acetaminophen. Human & experimental toxicology 1 36572547
2025 Antioxidant components of ram seminal plasma are influenced by age, season, and the RsaI polymorphism of the MTNR1A gene. Animal reproduction science 0 40328208
2025 Polymorphisms in MTNR1A (rs2119882) and CLOCK (rs1801260) genes are associated with facial acne susceptibility in gas station workers. PloS one 0 40705802
2025 Manipulating seasonality by using PMSG and Kisspeptin hormones and the impact of the MTNR1A gene on reproduction efficiency in ewes. Open veterinary journal 0 41035969
2023 Polymorphism of the MTNR1A Melatonin Receptor Gene in Goat Breeds of Northern Italy. Animals : an open access journal from MDPI 0 38136892
2020 Comparative analyses of site-directed mutagenesis of human melatonin MTNR1A and MTNR1B receptors using a yeast fluorescent biosensor. Biotechnology and bioengineering 0 33095446
2007 [Effect of genetic polymorphism of MTNR1A gene on adolescent idiopathic scoliosis]. Zhonghua wai ke za zhi [Chinese journal of surgery] 0 18067741