Affinage

LGI3

Leucine-rich repeat LGI family member 3 · UniProt Q8N145

Length
548 aa
Mass
61.7 kDa
Annotated
2026-06-10
13 papers in source corpus 11 papers cited in narrative 11 extracted findings
Cross-family judge faithfulness: 5/5 claims corpus-supported (100%)

Mechanistic narrative

Synthesis pass · prose summary of the discoveries below

LGI3 is a secreted leucine-rich repeat protein that functions as an extracellular ligand organizing ion channel complexes and, in non-neural contexts, as a survival- and differentiation-promoting signaling factor. In the nervous system, LGI3 is secreted by oligodendrocytes and enriched at juxtaparanodes of myelinated axons, where it binds axonal ADAM23 to control the accumulation and stability of Kv1 channel complexes; loss of LGI3 or ADAM23 disrupts juxtaparanodal Kv1 clustering, alters the axonal refractory period and burst firing, and suppresses Kv1-mediated short-term synaptic plasticity, and a disease-associated LGI3 missense variant is defective in secretion (PMID:36828548, PMID:38194969). In the heart, LGI3 associates with KV1.5 channels in atrial tissue, interferes with the KV1.5/KVβ association, reverses KVβ-induced inactivation, and reduces IKur and KV1.5 surface expression (PMID:41854369). In keratinocytes, LGI3 secretion is driven by UVB and by LPS through a TRIF-dependent NF-κB pathway that binds the LGI3 promoter, and the secreted protein engages ADAM22 and selectively activates the PI3K–Akt axis to promote survival (via MDM2 phosphorylation and p53 degradation), differentiation, and high-glucose migration (via β-catenin accumulation) (PMID:22741557, PMID:31627033, PMID:30091803, PMID:35751164). LGI3 also interacts with and stabilizes flotillin-1, regulating APP trafficking and exosome biogenesis (PMID:20461023). In TFE3-rearranged renal cell carcinoma, LGI3 is a direct transcriptional target of the TFE3 fusion and stabilizes GEMIN6 by blocking its ubiquitination, elevating AURKB to drive tumor progression (PMID:40849584).

Mechanistic history

Synthesis pass · year-by-year structured walk · 10 steps
  1. 2007 Low

    Initial work asked where LGI3 acts and what it associates with in brain, establishing a membrane/endocytic localization and a link to amyloid-β handling that framed later trafficking studies.

    Evidence Immunohistochemistry, subcellular fractionation, and Western blot in aged monkey brain plus Aβ-treated rat astrocyte cultures

    PMID:17387609 PMID:17786549

    Open questions at the time
    • Purely descriptive colocalization without functional manipulation of LGI3
    • No receptor or binding partner identified
    • Proteolytic cleavage inferred from Western blot only
  2. 2010 Medium

    To define a molecular partner, LGI3 was shown to bind and reciprocally stabilize flotillin-1, connecting LGI3 to clathrin-dependent endocytosis, APP trafficking, and exosome biogenesis.

    Evidence Co-immunoprecipitation and RNAi knockdown with APP trafficking assays in neural cells

    PMID:20461023

    Open questions at the time
    • No in vitro reconstitution of the LGI3–flotillin-1 complex
    • Single lab
    • Direct vs. indirect binding not resolved
  3. 2012 Medium

    Outside the nervous system, LGI3 was identified as a stress-induced secreted survival factor in keratinocytes, linking it to the PI3K–Akt–MDM2–p53 axis.

    Evidence ELISA secretion assay, viability assay, and Western blot for pAkt/pMDM2/p53 in UVB-irradiated HaCaT cells

    PMID:22741557

    Open questions at the time
    • No receptor identified at this stage
    • Single cell line
    • Mechanism of UVB-induced secretion not defined
  4. 2018 Medium

    Loss- and gain-of-function established that LGI3 promotes keratinocyte differentiation specifically through Akt, distinguishing it from MAPK signaling and confirming an in vivo skin role.

    Evidence siRNA knockdown, recombinant LGI3 treatment, PI3K inhibitor (LY294002), and LGI3-knockout mouse skin analysis

    PMID:30091803

    Open questions at the time
    • Receptor not identified in this study
    • Single lab
    • Connection to the secretion machinery unresolved
  5. 2019 Medium

    This work resolved both how LGI3 secretion is controlled and what receptor it engages in skin, identifying a TRIF–NF-κB transcriptional circuit and ADAM22 as an LGI3 receptor.

    Evidence ELISA, TRIF-specific NF-κB inhibition, promoter binding assay, co-IP, flow cytometry, and immunocytochemistry in HaCaT cells

    PMID:31627033

    Open questions at the time
    • Direct binding affinity not measured
    • ADAM22 link to downstream Akt signaling not formally connected
    • Single cell line
  6. 2022 Medium

    LGI3 signaling was extended to keratinocyte migration in a high-glucose setting, mapping a specific Akt–FOXO1–FAK–β-catenin output.

    Evidence siRNA knockdown, wound-healing migration assay, signaling Western blots, and PI3K inhibition in HaCaT cells

    PMID:35751164

    Open questions at the time
    • Receptor not identified
    • Single lab and cell line
    • In vivo relevance to diabetic wound healing not tested
  7. 2023 High

    In vivo genetics defined the core neural function of LGI3: acting with LGI2 through axonal ADAM23 to cluster and stabilize juxtaparanodal Kv1 channels that set the axonal refractory period and burst firing.

    Evidence ADAM23 knockout mice, immunohistochemistry/electron microscopy of Kv1 localization, electrophysiology, and LGI2/LGI3–ADAM23 interaction studies

    PMID:36828548

    Open questions at the time
    • Relative contributions of LGI2 vs. LGI3 not fully separated
    • Cell source of LGI3 not defined here
    • Structural basis of LGI–ADAM23–Kv1 assembly unknown
  8. 2024 High

    Cell-source and proteomic work established that oligodendrocyte-secreted LGI3 forms juxtaparanodal nanoclusters via ADAM23 to assemble Kv1 channels and support short-term synaptic plasticity, and tied a secretion-defective missense variant to disease.

    Evidence Epitope-tagged Lgi3 knockin proteomics, Lgi3 knockout phenotyping, imaging, electrophysiology, and secretion assay of a missense variant in mice

    PMID:38194969

    Open questions at the time
    • Disease mechanism downstream of defective secretion not fully traced
    • Stoichiometry of the LGI3–ADAM23–Kv1 nanocluster unresolved
    • Regulation of oligodendrocyte LGI3 secretion unknown
  9. 2025 Medium

    A new functional axis placed LGI3 as a TFE3-fusion transcriptional target that stabilizes GEMIN6 to elevate AURKB, defining a pro-tumorigenic role in TFE3-rearranged renal cell carcinoma.

    Evidence ChIP/promoter binding, co-IP, ubiquitination assay, knockdown with proliferation/migration/invasion readouts, and organoid drug sensitivity assays

    PMID:40849584

    Open questions at the time
    • Direct vs. indirect LGI3–GEMIN6 binding not resolved
    • Mechanism by which LGI3 blocks GEMIN6 ubiquitination unknown
    • Single lab
  10. 2026 Medium

    LGI3 was shown to modulate cardiac excitability by joining the atrial KV1.5 channelosome and interfering with KV1.5/KVβ assembly to reduce IKur.

    Evidence Co-IP in human atrial tissue and HEK293 cells, patch clamp, surface expression assay, with an AAV9 Lgi4 overexpression comparator

    PMID:41854369

    Open questions at the time
    • Lgi3-specific cardiac evidence partially inferred alongside Lgi4 data
    • In vivo cardiac LGI3 loss-of-function not tested
    • Role of a cardiac ADAM partner not established

Open questions

Synthesis pass · forward-looking unresolved questions
  • It remains unknown how LGI3's distinct activities — ADAM23/Kv1 channel organization, ADAM22/PI3K–Akt signaling, flotillin-1-dependent trafficking, and intracellular GEMIN6 stabilization — are reconciled mechanistically, and whether a single secreted form underlies all of them.
  • No structural model of LGI3 bound to any ADAM receptor
  • Whether the nuclear/intracellular GEMIN6-stabilizing pool is the same protein as the secreted ligand is undefined
  • No unifying account of receptor choice across tissues

Mechanism profile

Synthesis pass · controlled-vocabulary classification · explore literature graph →
Molecular activity
GO:0048018 receptor ligand activity 3 GO:0098772 molecular function regulator activity 3
Localization
GO:0005576 extracellular region 3 GO:0005886 plasma membrane 2
Pathway
R-HSA-112316 Neuronal System 2 R-HSA-162582 Signal Transduction 2
Complex memberships
cardiac KV1.5 channelosomejuxtaparanodal Kv1 channel complex

Evidence

Reading pass · 11 per-paper findings extracted from the source corpus
Year Finding Method Journal Conf PMIDs
2010 LGI3 interacts with flotillin-1 (Flo1) and stabilizes it; reciprocally, Flo1 stabilizes LGI3. Downregulation of the LGI3/Flo1 complex alters amyloid precursor protein (APP) trafficking directly to late endosomes and disrupts exosome formation, placing LGI3 in both clathrin-dependent endocytosis and an exosome biogenesis pathway. Co-immunoprecipitation, RNA interference knockdown of LGI3 and Flo1, APP trafficking assays in neural cells Neuroreport Medium 20461023
2007 LGI3 is predominantly localized at plasma membranes and nuclei of neural cells. In aged monkey brains, LGI3 accumulates at neuronal plasma membranes, colocalizes with endocytosis-associated proteins and lipid raft markers, and may undergo proteolytic cleavage as detected by Western blot. LGI3 also colocalizes with Aβ in astrocytes of aged brains. Immunohistochemistry, subcellular fractionation, Western blot, double immunohistochemistry in aged monkey brain tissue Cellular and molecular neurobiology Low 17786549
2007 Amyloid-β peptide (Aβ) robustly upregulates LGI3 expression in rat astrocyte cultures (RT-PCR and Western blot), and LGI3 colocalizes with Aβ at plasma membranes and in internalized vesicles, suggesting LGI3 participates in the astroglial endocytic response to Aβ. RT-PCR, Western blot, immunocytochemistry in rat primary astrocyte cultures treated with Aβ Cellular and molecular neurobiology Low 17387609
2012 UVB irradiation induces LGI3 secretion from HaCaT keratinocytes in a time- and dose-dependent manner. Exogenous LGI3 (50 ng/ml) increases keratinocyte survival after UVB by stimulating Akt phosphorylation, leading to MDM2 phosphorylation and subsequent p53 degradation. ELISA for LGI3 secretion, cell viability assay, Western blot for pAkt, pMDM2, and p53 in UVB-irradiated HaCaT cells Experimental dermatology Medium 22741557
2019 LPS induces LGI3 secretion from HaCaT keratinocytes via a TRIF-dependent NF-κB pathway; activated NF-κB binds the LGI3 promoter. LPS also upregulates ADAM22, and co-immunoprecipitation, flow cytometry, and immunocytochemistry demonstrate that LGI3 physically associates with ADAM22 on keratinocytes, identifying ADAM22 as an LGI3 receptor in this context. ELISA, NF-κB pathway inhibition (TRIF-specific), ChIP/promoter binding assay, co-immunoprecipitation, flow cytometry, immunocytochemistry Cytokine Medium 31627033
2018 LGI3 promotes differentiation of HaCaT human keratinocytes by selectively activating Akt (but not ERK, p38 MAPK, or JNK). PI3K inhibitor LY294002 blocks LGI3-induced upregulation of differentiation markers. LGI3 knockout mice show reduced involucrin expression in skin. siRNA knockdown, LGI3 recombinant protein treatment, Western blot for differentiation markers and kinase phosphorylation, PI3K inhibitor (LY294002), LGI3-knockout mouse tissue analysis Experimental dermatology Medium 30091803
2022 LGI3 promotes keratinocyte migration in high-glucose environments through Akt activation leading to β-catenin accumulation. LGI3 increases phosphorylation of Akt, FOXO1, and FAK, but not GSK3β, JNK, ERK, or p38. PI3K inhibitor LY294002 blocks LGI3-induced migration. siRNA knockdown, wound-healing/migration assay, Western blot for signaling molecules, PI3K inhibitor treatment in HaCaT cells Die Pharmazie Medium 35751164
2023 LGI2 and LGI3 interact extracellularly with axonal ADAM23 to control the accumulation and stability of juxtaparanodal Kv1 channel complexes in myelinated axons. Loss of ADAM23 disrupts juxtaparanodal Kv1 clustering, and juxtaparanodal Kv1 complexes were shown to regulate the refractory period and enable high-frequency burst firing. Genetic knockout of ADAM23 in mice, immunohistochemistry and electron microscopy for Kv1 channel localization, electrophysiological recording (refractory period and action potential firing), protein interaction studies for LGI2/LGI3–ADAM23 The Journal of cell biology High 36828548
2024 LGI3 is uniquely secreted by oligodendrocytes in the brain and enriched at juxtaparanodes of myelinated axons forming nanoscale subclusters. Proteomic analysis (epitope-tagged Lgi3 knockin mice) shows LGI3 uses ADAM23 as its receptor and co-assembles selectively with Kv1 channels. Loss of Lgi3 disrupts juxtaparanodal clustering of ADAM23 and Kv1 channels and suppresses Kv1-channel-mediated short-term synaptic plasticity. A disease-associated LGI3 missense variant shows defective secretion. Epitope-tagged Lgi3 knockin mice + proteomics, Lgi3 knockout mice, immunofluorescence/electron microscopy for juxtaparanodal localization, electrophysiology (short-term synaptic plasticity), secretion assay for missense variant Cell reports High 38194969
2026 LGI3 interacts with KV1.5 channels in human atrial tissue and heterologous cells, forming part of the cardiac KV1.5 channelosome. LGI3 impairs the KV1.5/KVβ association, partially reversing KVβ-induced N-type inactivation and reducing IKur amplitude, and decreases KV1.5 membrane expression. Co-immunoprecipitation in human atrial tissue and HEK293 cells, patch clamp electrophysiology, surface protein expression assay, AAV9-mediated cardiac Lgi4 overexpression mouse model (used as comparator for Lgi3 findings) Cardiovascular research Medium 41854369
2025 LGI3 is a direct transcriptional target of TFE3 fusion protein (binds LGI3 promoter). LGI3 interacts with GEMIN6 and inhibits its ubiquitination-mediated degradation, thereby stabilizing GEMIN6. Elevated GEMIN6 promotes mRNA maturation of Aurora B kinase (AURKB), driving proliferation, migration, and invasion of TFE3-rearranged renal cell carcinoma cells. ChIP/promoter binding assay, co-immunoprecipitation, ubiquitination assay, siRNA/shRNA knockdown with proliferation/migration/invasion readouts, organoid drug sensitivity assays Oncogene Medium 40849584

Source papers

Stage 0 corpus · 13 papers · ranked by NIH iCite citations
Year Title Journal Citations PMID
2006 Mouse LGI3 gene: expression in brain and promoter analysis. Gene 30 16545924
2012 Ultraviolet B-induced LGI3 secretion protects human keratinocytes. Experimental dermatology 19 22741557
2010 LGI3 interacts with flotillin-1 to mediate APP trafficking and exosome formation. Neuroreport 17 20461023
2023 LGI3/2-ADAM23 interactions cluster Kv1 channels in myelinated axons to regulate refractory period. The Journal of cell biology 16 36828548
2018 LGI3 promotes human keratinocyte differentiation via the Akt pathway. Experimental dermatology 16 30091803
2007 Abeta upregulates and colocalizes with LGI3 in cultured rat astrocytes. Cellular and molecular neurobiology 14 17387609
2007 Immunohistochemical and biochemical analyses of LGI3 in monkey brain: LGI3 accumulates in aged monkey brains. Cellular and molecular neurobiology 13 17786549
2024 Oligodendrocyte-derived LGI3 and its receptor ADAM23 organize juxtaparanodal Kv1 channel clustering for short-term synaptic plasticity. Cell reports 10 38194969
2019 LGI3 is secreted and binds to ADAM22 via TRIF-dependent NF-κB pathway in response to LPS in human keratinocytes. Cytokine 6 31627033
2022 LGI3 promotes human keratinocyte migration in high-glucose environments by increasing the expression of β-catenin. Die Pharmazie 4 35751164
2020 The Suppressive Effect of Leucine-Rich Glioma Inactivated 3 (LGI3) Peptide on Impaired Skin Barrier Function in a Murine Model Atopic Dermatitis. Pharmaceutics 2 32785038
2026 Lgi3-4 proteins modulate the KV1.5 channelosome and are potential therapeutic targets for atrial fibrillation. Cardiovascular research 1 41854369
2025 LGI3 promotes the progression of TFE3-rearranged renal cell carcinoma through GEMIN6/AURKB axis. Oncogene 0 40849584

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