Affinage

KCNE5

Potassium voltage-gated channel subfamily E regulatory beta subunit 5 · UniProt Q9UJ90

Length
142 aa
Mass
15.0 kDa
Annotated
2026-06-10
10 papers in source corpus 5 papers cited in narrative 5 extracted findings
Cross-family judge vs UniProt: Affinage preferred faithfulness: 4/4 claims corpus-supported (100%)

Mechanistic narrative

Synthesis pass · prose summary of the discoveries below

KCNE5 is an ancillary (beta) subunit that modulates the gating, current amplitude, and trafficking of multiple voltage-gated potassium channel alpha-subunits in cardiac tissue (PMID:12324418, PMID:30289750). Through specific transmembrane-domain residues, KCNE5 physically associates with KCNQ1 and dramatically right-shifts its voltage-dependent activation by more than 140 mV, slowing activation and accelerating deactivation in a manner specific to KCNQ1 among the channels tested (PMID:12324418); it also suppresses the KCNQ1/KCNE1 (IKs) current in a concentration-dependent manner (PMID:18313602). Beyond KCNQ1, KCNE5 modulates the transient outward current carried by Kv4.3 (KCND3) (PMID:21493962) and reduces KV2.1 surface expression, co-localizing with KV2.1 at intercalated discs in native myocytes and in intracellular vesicles in cell lines, consistent with promotion of intracellular sequestration; Kcne5 deletion in mouse ventricle increases KV1.5, KV4, and KV2.1 current densities (PMID:30289750). Disease-associated variants disrupt these regulatory roles: the atrial-fibrillation-linked KCNE5-L65F abolishes IKs suppression to produce a gain of function (PMID:18313602) and negatively shifts and amplifies KV2.1 current (PMID:30289750), while the variants Y81H and p.[D92E;E93X] increase Kv4.3-mediated Ito as a gain of function (PMID:21493962), mechanistically linking KCNE5 dysfunction to atrial fibrillation and Brugada syndrome.

Mechanistic history

Synthesis pass · year-by-year structured walk · 5 steps
  1. 2002 High

    Established that KCNE5 is a channel-modulating subunit by showing it binds KCNQ1 and imposes an extreme positive shift in voltage-dependent activation through defined transmembrane residues, defining its core biophysical mechanism and channel selectivity.

    Evidence Heterologous co-expression patch-clamp with transmembrane-domain mutagenesis and a channel specificity panel

    PMID:12324418

    Open questions at the time
    • No structural model of the KCNE5-KCNQ1 interface
    • Physiological significance of a >140 mV shift in native tissue not addressed
    • Whether KCNE5 modulates channels beyond the KCNQ/hERG panel not tested here
  2. 2008 High

    Connected KCNE5 function to arrhythmia by demonstrating it suppresses IKs and that the AF-associated L65F mutation abolishes this suppression, providing a gain-of-function mechanism for disease.

    Evidence Transient transfection of CHO cells with KCNQ1+KCNE1 plus wild-type or L65F KCNE5; whole-cell patch-clamp

    PMID:18313602

    Open questions at the time
    • Single focused study without native-tissue confirmation
    • Mechanism by which L65F loses suppression not resolved at the residue level
  3. 2011 High

    Broadened KCNE5's alpha-subunit repertoire by showing it modulates Kv4.3-mediated Ito and that distinct disease variants (Y81H, D92E;E93X) cause gain-of-function selectively through Kv4.3 rather than KCNQ1.

    Evidence Co-transfection of heterologous cells with KCND3 or KCNQ1 plus mutant KCNE5; patch-clamp with action potential simulation

    PMID:21493962

    Open questions at the time
    • No direct biochemical demonstration of KCNE5-Kv4.3 physical interaction
    • Native myocyte validation of variant effects on Ito not performed
  4. 2018 High

    Provided in vivo and trafficking-level mechanism by showing Kcne5 deletion augments multiple ventricular KV currents and that KCNE5 controls KV2.1 surface expression via intracellular sequestration, with the L65F mutant altering KV2.1 gating and amplitude.

    Evidence Kcne5 knockout mouse with intracardiac ECG and myocyte patch-clamp; co-immunofluorescence of KCNE5 and KV2.1; heterologous expression of human mutants

    PMID:30289750

    Open questions at the time
    • Molecular machinery of KCNE5-mediated KV2.1 retention not defined
    • Mouse-to-human extrapolation of KV current repertoire uncertain
    • Whether intracellular co-localization reflects direct binding versus shared trafficking unresolved
  5. 2012 Low

    Reported KCNE5 protein expression outside the heart, localizing it to first-trimester placental syncytiotrophoblast, raising the possibility of a non-cardiac role.

    Evidence Immunohistochemistry and qRT-PCR on first-trimester human placental tissue

    PMID:26105295

    Open questions at the time
    • Single localization study with no functional consequence established
    • No mechanistic follow-up or channel partner identified in placenta

Open questions

Synthesis pass · forward-looking unresolved questions
  • The structural basis of KCNE5 selectivity across its alpha-subunit partners and the trafficking machinery it engages to sequester KV2.1 remain undefined.
  • No structure of KCNE5 bound to any alpha-subunit
  • Mechanism of KV2.1 intracellular retention unknown
  • Non-cardiac (e.g. placental) function uncharacterized

Mechanism profile

Synthesis pass · controlled-vocabulary classification · explore literature graph →
Molecular activity
GO:0098772 molecular function regulator activity 4
Localization
GO:0005886 plasma membrane 1 GO:0031410 cytoplasmic vesicle 1
Pathway
R-HSA-112316 Neuronal System 2

Evidence

Reading pass · 5 per-paper findings extracted from the source corpus
Year Finding Method Journal Conf PMIDs
2002 KCNE5 physically interacts with KCNQ1 and shifts the voltage activation curve of the KCNQ1 channel by more than 140 mV in the positive direction (activation threshold +40 mV, midpoint +116 mV), causing slow activation and rapid deactivation. This modulation is specific to KCNQ1: other KCNQ family members and hERG1 were unaffected. Four residues in the transmembrane domain of KCNE5 were identified as critical for controlling voltage-dependent activation of KCNQ1. Heterologous co-expression electrophysiology (patch-clamp), transmembrane domain mutagenesis Biophysical journal High 12324418
2008 Wild-type KCNE5 suppresses IKs (KCNQ1+KCNE1) current in a concentration-dependent manner. The AF-associated missense mutation KCNE5-L65F abolishes this suppression, yielding currents indistinguishable from KCNE5-absent controls and producing a gain-of-function of IKs. Transient transfection of CHO cells expressing KCNQ1+KCNE1 with wild-type or L65F KCNE5; whole-cell patch-clamp electrophysiology Heart rhythm High 18313602
2011 KCNE5 modulates the transient outward current (Ito) conducted by Kv4.3 (KCND3). Disease-associated variants KCNE5-Y81H and KCNE5-p.[D92E;E93X] significantly increase Ito compared to wild-type KCNE5 when co-expressed with KCND3 (gain-of-function). In contrast, neither variant significantly altered KCNQ1+KCNE5 current properties. Co-transfection of HEK/heterologous cells with KCND3 or KCNQ1 plus wild-type or mutant KCNE5; whole-cell patch-clamp electrophysiology; action potential simulation model Circulation. Arrhythmia and electrophysiology High 21493962
2018 In mouse ventricular myocytes, Kcne5 deletion increased KV current density by augmenting IKslow,1 (KV1.5) and Ito,f (KV4) in the apex and IKslow,2 (KV2.1) in both apex and septum. KCNE5 colocalized with KV2.1 at intercalated discs in ventricular myocytes, and in HL-1 and HEK cells KCNE5 and KV2.1 co-localized predominantly in intracellular vesicles, suggesting KCNE5 reduces KV2.1 surface expression by promoting its intracellular sequestration. The human AF-associated KCNE5-L65F mutation negatively shifted the voltage dependence of KV2.1-KCNE5 channels and increased maximum current density >2-fold. Kcne5 knockout (Kcne5-/0) mouse model; intracardiac ECG; ventricular myocyte patch-clamp; immunolocalization (co-immunofluorescence of KCNE5 and KV2.1 in native tissue and cell lines); heterologous co-expression of human mutants with KV2.1 FASEB journal High 30289750
2012 KCNE5 protein is expressed in first-trimester human placenta and localizes mainly to the syncytiotrophoblast, with additional expression in the mesenchyme, as determined by immunohistochemistry. Immunohistochemistry and qRT-PCR on first-trimester placental tissue Pregnancy hypertension Low 26105295

Source papers

Stage 0 corpus · 10 papers · ranked by NIH iCite citations
Year Title Journal Citations PMID
2008 Gain of function in IKs secondary to a mutation in KCNE5 associated with atrial fibrillation. Heart rhythm 100 18313602
2011 KCNE5 (KCNE1L) variants are novel modulators of Brugada syndrome and idiopathic ventricular fibrillation. Circulation. Arrhythmia and electrophysiology 94 21493962
2002 KCNE5 induces time- and voltage-dependent modulation of the KCNQ1 current. Biophysical journal 94 12324418
2005 Relation of 97T polymorphism in KCNE5 to risk of atrial fibrillation. The American journal of cardiology 53 16054468
2016 KCNE4 and KCNE5: K(+) channel regulation and cardiac arrhythmogenesis. Gene 39 27484720
2018 Deletion in mice of X-linked, Brugada syndrome- and atrial fibrillation-associated Kcne5 augments ventricular KV currents and predisposes to ventricular arrhythmia. FASEB journal : official publication of the Federation of American Societies for Experimental Biology 25 30289750
2011 KCNE5 polymorphism rs697829 is associated with QT interval and survival in acute coronary syndromes patients. Journal of cardiovascular electrophysiology 13 21985337
2004 Does KCNE5 play a role in long QT syndrome? Clinica chimica acta; international journal of clinical chemistry 10 15193977
2018 Case report of familial sudden cardiac death caused by a DSG2 p.F531C mutation as genetic background when carrying with heterozygous KCNE5 p.D92E/E93X mutation. BMC medical genetics 9 30129429
2012 OS081. Novel KCNQ3/KCNE5 isoform protein and mRNA expression in first trimester human placentae. Pregnancy hypertension 2 26105295

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