| 2011 |
Two IRF8 mutations (K108E and T80A) impair IRF8 transcriptional activity by disrupting the interaction between IRF8 and DNA, causing human primary immunodeficiency with loss of monocytes and dendritic cells. |
Patient genetic sequencing, functional transcriptional assays |
The New England journal of medicine |
High |
21524210
|
| 2002 |
ICSBP/IRF8 is essential for the development of mouse type I IFN-producing cells (plasmacytoid DC precursors) and CD8α+ dendritic cells, and is required for IL-12p40 and IL-15 expression but not IL-4 in DCs. |
ICSBP−/− mouse phenotyping, flow cytometry, RT-PCR |
The Journal of experimental medicine |
High |
12461077
|
| 2002 |
ICSBP/IRF8 is required intrinsically in bone marrow-derived progenitors for in vivo differentiation of CD8α+ DCs, functioning downstream of common DC progenitors, and also influences functional maturation of CD8α− DCs. |
ICSBP−/− mice, wild-type/ICSBP−/− bone marrow chimeras, flow cytometry |
Blood |
High |
12393690
|
| 2000 |
ICSBP/IRF8 acts as a principal transcriptional activator of IL-12 p40 in macrophages by binding the Ets site of the IL-12 p40 promoter via protein-protein interaction, and synergizes with IRF-1 to induce IL-12 p40 expression. |
ICSBP−/− macrophage-like cells, promoter transfection, DNA affinity binding assay, endogenous IL-12p40 mRNA induction |
Journal of immunology |
High |
10861061
|
| 1995 |
ICSBP/IRF8 contains at least three functional domains: a DNA-binding domain (amino acids 1-121), a transcriptional repressor domain, and an IRF-association domain enabling heterocomplex formation with IRF-1 and IRF-2 in vitro and in vivo. |
Domain deletion/fusion constructs (ICSBP-VP16, GAL4-ICSBP), reporter assays, EMSA, co-immunoprecipitation |
The Journal of biological chemistry |
High |
7768900
|
| 1993 |
The murine ICSBP/IRF8 gene is induced by IFN-γ through a palindromic IFN response element (pIRE, TTCNNGGAA) in the promoter that binds the 91-kDa ISGF3α subunit (STAT1). |
Genomic structure analysis, promoter reporter assay, gel mobility shift assay, antibody competition |
Molecular and cellular biology |
High |
8321202
|
| 2013 |
IRF8 loss in mice generates myeloid populations homologous to MDSCs; MDSC-inducing factors G-CSF and GM-CSF downregulate IRF8 via STAT3- and STAT5-dependent pathways, placing IRF8 as a negative regulator of MDSC development. |
Irf8−/− mice, IRF8 overexpression in vivo, cytokine treatment, gene expression profiling, STAT pathway analysis |
The Journal of clinical investigation |
High |
24091328
|
| 2016 |
IRF8 acts as a terminal selector for cDC1 survival; conditional deletion shows IRF8 is required during early but not late monocyte development, and late deletion of IRF8 in pDCs alters their phenotype and gene expression, impairing type I IFN production while increasing T cell stimulatory function. |
Conditional Irf8fl/fl mice with multiple Cre drivers, BM chimeras, gene expression profiling |
Immunity |
High |
27637148
|
| 2013 |
IRF8 binds promoter-proximal and distal regions genome-wide with PU.1 during monocyte differentiation, associated with enhancer formation (H3K4me1), and operates upstream of KLF4 to drive monocyte (Ly6C+) differentiation. |
ChIP-seq, gene expression profiling, Irf8−/− mice, KLF4 rescue experiments in Irf8−/− cell lines |
Blood |
High |
23319570
|
| 2016 |
IRF8 and IRF1 cooperatively control macrophage transcriptional programs at basal level and after IFN-γ activation, with IRF8 operating in two major cistrome clusters together with PU.1 and STAT1 to direct antimicrobial and inflammatory gene expression. |
ChIP-seq, RNA-seq in IRF8 and IRF1 mutant primary macrophages, histone modification profiling |
The Journal of experimental medicine |
High |
27001747
|
| 2007 |
The IRF8 R294C mutation (BXH2 mouse) abolishes CD8α+ DC development without impairing pDC development by preventing IRF8 interaction with partner transcription factors and blocking binding to promoters requiring partner interactions, demonstrating mechanistic separation of DC subset development. |
BXH2 mouse characterization, EMSA, chromatin immunoprecipitation assay |
Blood |
High |
18055870
|
| 2005 |
IRF8 activates macrophage differentiation target genes (cystatin C, cathepsin C, lysozyme, prosaposin) through a novel cis element (GAAANN[N]GGAA) comprising a core IRF-binding and Ets-binding motif; IRF8 and PU.1 bind this element in vivo. |
Microarray, retroviral reporter assay, chromatin immunoprecipitation, promoter deletion analysis |
Blood |
High |
15947094
|
| 2003 |
NFAT and ICSBP/IRF8 bind a composite element at -68 to -54 of the IL-12 p40 promoter; NFAT is required for ICSBP binding to this region, NFAT and ICSBP physically associate independent of DNA, and this association is abrogated by IL-10. |
Chromatin immunoprecipitation, co-immunoprecipitation of endogenous proteins, reporter assays, dominant-negative NFAT |
The Journal of biological chemistry |
High |
12876285
|
| 2002 |
ICSBP/IRF8 and IRF-1 cooperatively stimulate murine IL-12 p40 transcription through an ISRE-like element distinct from the NF-κB and C/EBP sites in the murine promoter. |
Co-transfection reporter assays, promoter mutation analysis in RAW264.7 macrophages |
FEBS letters |
Medium |
12417340
|
| 2002 |
ICSBP/IRF8 exerts dual transcriptional activity (repression or activation) depending on which partner it heterodimerizes with; the IRF association domain (IAD) of IRF8 and a PEST domain on partners mediate the interaction. |
Protein-protein interaction domain analysis, reporter assays |
Journal of interferon & cytokine research |
Medium |
11846986
|
| 2003 |
ICSBP/IRF8 represses PU.1-induced Dab2 (disabled-2) promoter transactivation by binding the Dab2 promoter together with PU.1, and Dab2 overexpression promotes macrophage spreading, adhesion, and actin fiber formation. |
ChIP, reporter/promoter assay, overexpression in bone marrow-derived macrophages |
The EMBO journal |
Medium |
11823414
|
| 2003 |
ICSBP/IRF8 inhibits growth of Bcr/Abl-transformed myeloid progenitor cells by activating Blimp-1 and METS/PE1 as direct target genes, which in turn repress c-Myc expression, causing growth arrest and macrophage differentiation without inhibiting Bcr/Abl kinase activity. |
ICSBP ectopic expression, ICSBP/estrogen receptor chimera, c-Myc mRNA measurement, Blimp-1/METS identification as direct targets |
Blood |
High |
12933588
|
| 2014 |
IRF8 promotes neuroinflammation by enhancing αvβ8 integrin expression in APCs, thereby activating TGF-β signaling leading to Th17 cell differentiation; IRF8 also induces IL-12 and IL-23 but inhibits IL-27, and activates microglia. |
Irf8−/− mouse EAE model, bone marrow chimeras, gene expression analysis |
Immunity |
High |
24485804
|
| 2008 |
IRF8 binds directly to an IRF8/Ets consensus sequence in promoters of Sfpi1 (PU.1) and Ebf1, repressing Sfpi1 and activating Ebf1 transcription, thereby modulating HSC lineage choice toward B cells. |
ChIP, reporter assay, IRF8−/− mice, HSC rescue with WT vs signaling-deficient IRF8 mutant |
Blood |
High |
18799728
|
| 2014 |
The IRF8-PU.1 complex promotes B cell identity by simultaneously inducing BCL6 and PAX5 and repressing AID and BLIMP-1, thus suppressing class-switch recombination and plasma cell differentiation; this complex functions reciprocally to IRF4. |
Conditional knockout mice, gene expression profiling, functional differentiation assays |
The Journal of experimental medicine |
High |
25288399
|
| 2015 |
IRF8 and PU.1 form a double-negative feedback loop with IRF4 to regulate B cell developmental bifurcation; IRF8 dampens BCR signaling, facilitates antigen-specific T cell interaction, and promotes antibody affinity maturation while antagonizing IRF4-driven plasmablast differentiation. |
Conditional knockout mice, genomic analysis, stochastic modeling, functional B cell assays |
Nature immunology |
High |
26437243
|
| 2015 |
IRF8 directly activates autophagy-related genes in macrophages in response to multiple stresses (IFNγ, TLR stimulation, bacterial infection, starvation, M-CSF), promoting autophagosome formation and lysosomal fusion; Irf8−/− macrophages fail to clear Listeria monocytogenes due to deficient autophagic activity. |
Irf8−/− macrophages, autophagy assays (SQSTM1/ubiquitin accumulation), Listeria infection, gene expression |
Nature communications |
High |
25775030
|
| 2011 |
IRF8 directly binds the acid ceramidase (A-CDase) promoter and represses its transcription; loss of IRF8 increases A-CDase levels, reducing ceramide accumulation and impairing Fas-mediated apoptosis in CML cells. IRF8 expression in CML is regulated by promoter DNA methylation. |
ChIP, A-CDase siRNA/overexpression, ceramide measurement, apoptosis assays, in vivo CML model |
Cancer research |
High |
21487040
|
| 2010 |
ICSBP/IRF8, together with Tel and HDAC3, binds a cis element in the GAS2 promoter to repress GAS2 transcription; GAS2 inhibits calpain protease activity, and ICSBP thereby controls calpain-dependent β-catenin protein degradation in myeloid progenitors. |
Promoter reporter assay, ChIP, calpain activity assay, β-catenin protein measurement |
Molecular and cellular biology |
High |
20679491
|
| 2018 |
During viral infection, NK cells upregulate IRF8 via IL-12 signaling through STAT4, which promotes epigenetic remodeling of the Irf8 locus; IRF8 then facilitates NK cell proliferative burst by promoting cell-cycle gene expression and directly controlling Zbtb32. |
IL-12/STAT4 signaling analysis, Irf8 locus epigenetic profiling, Irf8 conditional KO in NK cells, MCMV infection model |
Immunity |
High |
29858012
|
| 2019 |
A +32-kb Irf8 enhancer (BATF3-dependent) is required for cDC1 maturation but not specification; a +41-kb Irf8 enhancer (previously considered pDC-specific) is transiently accessible in cDC1 progenitors and is required for Irf8 induction in CDPs and cDC1 fate specification. |
CRISPR/Cas9 genome editing of enhancers, chromatin profiling, in vivo DC development analysis |
Nature immunology |
High |
31406378
|
| 2019 |
Nfil3 is required for the transition to committed cDC1 progenitors (Zeb2hi→Zeb2lo/Id2hi); this Nfil3-Zeb2-Id2 circuit blocks E-protein activity, switching Irf8 enhancer usage from the +41-kb to the +32-kb enhancer during cDC1 development. |
Single-cell RNA-seq of CDP, genetic epistasis among Nfil3, Id2, Zeb2, Irf8 enhancer deletion |
Nature immunology |
High |
31406377
|
| 2020 |
High IRF8 concentrations engage BATF3 at AP1-IRF composite elements (AICEs) to activate cDC1-specific genes (e.g., Xcr1), while low IRF8 or IRF4 can redundantly activate EICE-dependent common DC genes; cDC1 identity depends on AICE-mediated transcription requiring high IRF8. |
ChIP-seq, conditional KO, IRF8/IRF4 concentration titration experiments |
Immunity |
High |
32795402
|
| 2021 |
A RUNX-CBFβ-driven enhancer 56 kb downstream of the Irf8 TSS controls Irf8 expression throughout the myeloid lineage; high, low, or null IRF8 expression promotes cDC1, Ly6C+ monocyte, or neutrophil differentiation respectively through epigenetic regulation of distinct enhancer sets. |
In vivo enhancer deletion, ATAC-seq, conditional KO, quantitative IRF8 expression titration |
Nature immunology |
High |
33603226
|
| 2018 |
IRF8 and PU.1 govern enhancer landscape dynamics in mononuclear phagocyte progenitors (MDPs): IRF8 is required for establishment of monocyte- and DC-specific enhancers at progenitor stages before associated gene expression, particularly for enhancers common to both lineages. |
ATAC-seq/H3K4me1 ChIP-seq in vivo across hematopoietic development, Irf8−/− MDPs |
Cell reports |
High |
29514092
|
| 2019 |
IRF8 expressed in a subpopulation of LMPPs changes chromatin accessibility at DC lineage gene enhancers, biasing fate toward DCs (especially cDC1) independently of significant transcriptional changes at that stage. |
Single-cell RNA-seq, ATAC-seq, IRF8-GFP knock-in mice, Irf8−/− mice, in vivo transfer experiments |
Blood |
High |
30796024
|
| 2022 |
IRF8 is required for efficient STING-mediated innate immune responses in monocytes via a transcription-independent mechanism: upon DNA sensing, IRF8 is phosphorylated at Serine 151, enabling its IRF-associated domain to associate with STING and facilitate STING polymerization and TBK1-mediated phosphorylation of STING and IRF3. |
IRF8 phosphorylation site mapping, co-immunoprecipitation with STING, STING polymerization assay, IRF8 KO monocytes, HSV-1 infection model |
Nature communications |
High |
35973990
|
| 2022 |
IRF8-expressing tumor-associated macrophages (TAMs) promote CTL exhaustion in tumors by presenting cancer cell antigens to CTLs; TAM-specific IRF8 deletion prevents exhaustion of cancer-reactive CTLs and suppresses tumor growth. |
TAM-specific Irf8 conditional KO, murine breast cancer model, CTL exhaustion assays |
Immunity |
High |
36288724
|
| 2022 |
IRF8 loss in committed cDC1s causes their transcriptional, functional, and epigenetic reprogramming into cDC2-like cells, independently of IRF4, associated with decreased accessibility of IRF8/Batf3/AICE-binding elements and increased cDC2-associated TF-binding sites. |
Xcr1-Cre conditional Irf8 deletion, ATAC-seq, RNA-seq, functional assays |
Immunity |
High |
35830859
|
| 2003 |
IRF-8 drives Nramp1 expression in macrophages via protein-protein interaction with Miz-1 (identified by yeast two-hybrid) and PU.1, all of which bind to the Nramp1 promoter; Irf8−/− mice have low Nramp1 expression that cannot be induced, explaining susceptibility to intracellular pathogens. |
Yeast two-hybrid, ChIP, Irf8−/− mouse infection studies, promoter analysis |
The Journal of biological chemistry |
High |
12904288
|
| 2017 |
USP4 physically interacts with IRF8 and stabilizes it via K48-linked deubiquitination in regulatory T cells; USP4 depletion promotes IRF8 polyubiquitination and impairs Treg suppressive function. |
Co-immunoprecipitation, ubiquitination assay, USP4 knockdown, Treg functional assays |
FEBS letters |
Medium |
28477415
|
| 2012 |
miR-22 directly binds the 3'UTR of Irf8 mRNA for posttranscriptional repression, and overexpression of miR-22 enhances cDC differentiation at the expense of pDCs while reducing Irf8 mRNA abundance. |
Luciferase reporter assay with Irf8 3'UTR, miR-22 overexpression/knockdown, DC differentiation assays |
PloS one |
Medium |
23251709
|
| 2010 |
IRF8 and PU.1 bind to the EICE on the NLRP3-related and IFN-signaling gene promoters in myeloid cells; siRNA knockdown of IRF8 in THP-1 cells identifies direct functional target genes including OAS1 and IRF9. |
siRNA knockdown, ChIP-chip, gene expression profiling |
Molecular immunology |
Medium |
20573402
|
| 2021 |
ZMYND8 directly activates IRF8 in AML via its lineage-specific enhancer, requiring BRD4 (via ZMYND8's chromatin reader cassette binding to BRD4's ET domain); this ZMYND8-IRF8 axis is an AML dependency for proliferation. |
ChIP-seq, ZMYND8 KO in vitro and in vivo, BRD4 co-IP, enhancer analysis in cell lines and patient samples |
Molecular cell |
High |
34358447
|
| 2021 |
Brd4 forms a complex with IRF8/PU.1 and binds to IRF8 and PU.1 binding motifs on Naip promoters to maintain Naip expression, which is required for NLRC4 inflammasome activation in response to Salmonella infection. |
Brd4 conditional KO macrophages, RNA-seq, ChIP, co-immunoprecipitation, inflammasome assays |
The Journal of cell biology |
High |
33535228
|
| 2020 |
IRF8 promotes NLRP3 inflammasome activation during Gram-negative bacterial infection by mediating IRF3 phosphorylation required for Ifnb transcription, which in turn triggers caspase-11-dependent NLRP3 activation. |
Irf8−/− bone marrow-derived macrophages, Gram-negative bacterial infection, caspase-11 and gasdermin-D cleavage assays, Ifnb measurement |
Journal of immunology |
Medium |
32205422
|
| 2020 |
PU.1 and IRF8 bind the EICE site at -309/-300 of the human NLRP3 distal promoter, and knockdown of either factor downregulates NLRP3 and diminishes LPS-induced IL-1β secretion in THP-1 macrophages. |
Reporter assay, EMSA, ChIP, siRNA knockdown, IL-1β ELISA |
Frontiers in immunology |
Medium |
33897697
|
| 2019 |
PU.1 switches transcriptional partner from IRF8 (in macrophages) to NFATc1 (in osteoclasts) during RANKL-induced osteoclastogenesis; IRF8 downregulation correlates with Irf8 promoter chromatin closure and decreased expression of IRF8-target macrophage genes. |
ChIP-seq, FAIRE-seq, H3K4me1/H3K27ac profiling in BMMs and OCs, RANKL differentiation |
Journal of bone and mineral research |
High |
30721543
|
| 2019 |
IRF8 G388S mutation (in conserved C-terminal motif) promotes osteoclastogenesis and fails to inhibit NFATc1-dependent transcriptional activation; genome-wide IRF8 binding in osteoclast precursors is lost with the mutation, enhancing osteoclast-specific transcripts. |
Functional osteoclastogenesis assays, NFATc1 reporter, ChIP-seq, Irf8+/− mice alveolar bone phenotyping |
Journal of bone and mineral research |
High |
30840779
|
| 2007 |
IRF8 controls thymic CHRNA1 expression by binding an IRF8-binding site in the CHRNA1 promoter; a promoter variant (associated with myasthenia gravis) prevents IRF8 binding and abrogates promoter activity in thymic epithelial cells, working cooperatively with AIRE. |
Promoter reporter assay in thymic epithelial cells, EMSA, human genetic association across two populations |
Nature |
High |
17687331
|
| 2018 |
IRF8 and PU.1 directly target each other's gene transcription in a positive feedback loop, and cooperatively bind IRF-ETS composite motifs on microglial activation-related genes, as verified biochemically by synergistic binding of IRF8 and PU.1 to composite-motif DNA; post-developmental deletion of either in microglia abolishes microglial activation. |
3D fluorescence imaging, conditional KO in microglia, ChIP, synergistic DNA binding assay |
Protein & cell |
High |
30484118
|
| 2024 |
IRF8 binds stepwise to enhancer regions in postnatal microglia along with Sall1 and PU.1, driving chromatin accessibility preceding microglia-specific gene expression; IRF8 is also required for microglia-specific DNA methylation patterns; deletion shifts microglia toward DAM-like gene programs and reduces amyloid plaque interaction. |
ChIP-seq, ATAC-seq, scRNA-seq, scATAC-seq, DNA methylation profiling, constitutive and conditional Irf8 KO, 5xFAD model |
Nature immunology |
High |
39313544
|
| 2015 |
IRF8 is required for IL-1β expression in reactive spinal microglia via an IRF1-dependent pathway: peripheral nerve injury induces IRF8, which in turn induces IRF1, and IRF1 is required for IRF8-driven IL-1β upregulation. |
IRF8 lentiviral transduction in cultured microglia, IRF1 knockdown, in vivo nerve injury model with IRF8-deficient mice |
Journal of pharmacological sciences |
Medium |
26318672
|
| 2015 |
Irf8 is required for formation of all macrophages during primitive and transient definitive hematopoiesis in zebrafish, with rescue of macrophage fate by wildtype irf8 expression in neutrophil/macrophage lineages, indicating irf8 regulates macrophage specification and survival. |
TALEN-mediated irf8 null zebrafish, irf8 rescue expression, lineage analysis |
PloS one |
Medium |
25615614
|
| 2013 |
In CML, Wnt/β-catenin activation upregulates Irf8 in normal hematopoiesis, and Irf8 in turn limits oncogenic β-catenin; combined Irf8 deficiency and constitutive β-catenin activation causes CML blast crisis with elevated leukemic potential and imatinib resistance. |
Mouse genetics, BCR-ABL CML model, β-catenin/Irf8 double KO, gene expression profiling |
The Journal of experimental medicine |
Medium |
24101380
|
| 2020 |
Human cDC2 heterogeneity originates from two distinct IRF8-dependent pathways: a lymphoid-primed IRF8hi pathway produces pDCs, cDC1s, and DC2s, while an IRF8lo common myeloid pathway produces DC3s and monocytes; DC3s have a lower requirement for IRF8 and expand in partial IRF8 deficiency. |
High-dimensional flow cytometry, in vitro differentiation, allelic series of human IRF8 deficiency patients |
Immunity |
High |
32735845
|
| 2022 |
FTO (m6A demethylase) directly binds m6A sites in the 3'UTR of IRF8 mRNA and induces its degradation; FTO inhibition restores IRF8 expression and suppresses T-ALL by inhibiting PI3K/AKT signaling. |
m6A sequencing, FTO knockdown/overexpression, IRF8 mRNA stability assay, in vivo T-ALL mouse model |
Advanced science |
Medium |
36478193
|
| 2022 |
The lupus risk variant rs2280381 modulates PU.1 binding at an IRF8 enhancer that spatially contacts the IRF8 promoter; the enhancer RNA AC092723.1 recruits TET1 to the IRF8 promoter to regulate IRF8 expression through DNA demethylation. |
CRISPR activation, 3D chromatin interaction assay, TET1 ChIP, DNA methylation analysis, allele-specific enhancer RNA measurement |
Nature communications |
Medium |
35388006
|
| 2016 |
Biallelic IRF8 mutations cause familial NK cell deficiency with impaired terminal maturation (paucity of CD56dim NK cells, increase in CD56bright cells) in an NK-cell-intrinsic manner, with dysregulation of multiple genes controlling maturation. |
Patient genetic analysis, Irf8−/− mouse NK phenotyping, bone marrow chimeras, gene expression profiling of NK developmental subsets |
The Journal of clinical investigation |
High |
27893462
|
| 2020 |
IRF8 suppresses inflammasome activation in cDC1s by limiting expression of inflammasome-associated genes; reduced IRF8 in cDC1s leads to aberrant NLRP3 inflammasome activation and impaired CD8 T cell priming. |
Irf8 conditional KO in cDC1s, inflammasome assays, T cell priming assays |
Cell reports |
Medium |
32375053
|
| 2018 |
mTOR controls monocyte/macrophage development at early stages through the STAT5-IRF8-CD115 pathway: mTOR deficiency causes overactivated STAT5 that downregulates IRF8, leading to decreased CD115 (M-CSFR) expression at transcriptional and translational levels. |
mTOR-deficient mice, mixed chimeras, STAT5 activation analysis, IRF8 protein measurement, CD115 transcriptional analysis |
Blood |
Medium |
29463562
|