| 1998 |
DNA double-strand breaks (DSBs) induce rapid phosphorylation of histone H2AX specifically at serine 139, generating γ-H2AX; approximately 2×10^6 base pairs of chromatin are involved per DSB, indicating large-scale chromatin modification at each break site. |
Two-dimensional gel electrophoresis, 32P incorporation, in vivo irradiation of mammalian cells and mice |
The Journal of biological chemistry |
High |
9488723
|
| 2001 |
ATM is the major kinase responsible for H2AX phosphorylation at serine 139 in response to DSBs in vivo; ATM can phosphorylate H2AX in vitro; DNA-PK contributes residual phosphorylation in ATM-deficient cells, while ATR is not responsible in non-replicating cells. |
ATM-/- and DNA-PKcs-/- cell lines/MEFs, in vitro kinase assay, ectopic ATM reconstitution, wortmannin inhibition |
The Journal of biological chemistry |
High |
11571274
|
| 2004 |
ATM and DNA-PK function redundantly to phosphorylate H2AX after ionizing radiation; ablation of both kinases is required to eliminate IR-induced H2AX phosphorylation; ATR is not required for H2AX phosphorylation by DSBs in non-replicating cells; DNA-PK-mediated H2AX phosphorylation contributes to MDC1 and 53BP1 recruitment to DSB sites. |
Human fibroblasts and MEFs lacking DNA-PK or ATM, LY294002 inhibition, chicken DT40 double-knockout cells |
Cancer research |
High |
15059890
|
| 2003 |
γ-H2AX is not required for initial recruitment of repair/signaling proteins (Nbs1, 53BP1, Brca1) to DSBs, but is required for their subsequent accumulation and retention into irradiation-induced foci (IRIF); phosphorylation-dead H2AX mutants confirm this distinction. |
H2AX-/- cells reconstituted with phosphorylation mutants, immunofluorescence, live-cell imaging |
Nature cell biology |
High |
12792649
|
| 2004 |
The INO80 ATP-dependent chromatin remodeling complex is recruited to DSBs through a direct interaction between the Nhp10 (HMG-like) subunit of INO80 and γ-H2AX (phosphorylated histone H2A in yeast); loss of Nhp10 or γ-H2AX reduces INO80 recruitment; INO80 components show synthetic genetic interactions with the RAD52 repair pathway. |
Co-immunoprecipitation, chromatin immunoprecipitation at HO endonuclease-induced DSB in yeast, genetic epistasis |
Cell |
High |
15607974
|
| 2005 |
Protein phosphatase 2A (PP2A) catalytic subunit directly dephosphorylates γ-H2AX in vitro, co-immunoprecipitates and co-localizes with γ-H2AX in DNA damage foci; PP2A recruitment to foci is H2AX-dependent; PP2A inhibition/knockdown causes γ-H2AX foci persistence, inefficient DNA repair, and hypersensitivity to DNA damage. |
Co-immunoprecipitation, in vitro phosphatase assay, RNAi knockdown, immunofluorescence colocalization |
Molecular cell |
High |
16310392
|
| 2008 |
A PP4 phosphatase complex (PP4C/PP4R2/PP4R3β) specifically dephosphorylates ATR-mediated γ-H2AX generated during DNA replication, acting directly on γ-H2AX within mononucleosomes in vitro; PP4 silencing causes persistence of replication-associated γ-H2AX foci and hypersensitivity to replication inhibitors but not radiomimetic drugs, indicating pathway specificity distinct from PP2A. |
In vitro phosphatase assay with mononucleosomes, RNAi knockdown, clonogenic survival, immunofluorescence |
Molecular cell |
High |
18614045
|
| 2009 |
EYA protein tyrosine phosphatase dephosphorylates a C-terminal tyrosine (Y142) of H2AX in response to genotoxic stress; when Y142 is phosphorylated, pro-apoptotic factors are recruited to the γ-H2AX tail; EYA-mediated dephosphorylation of Y142 shifts the balance toward DNA repair factor recruitment rather than apoptosis. |
In vitro phosphatase assay, mutation of Y142, co-immunoprecipitation, mammalian cell genotoxic stress assays |
Nature |
High |
19234442
|
| 2007 |
TIP60 histone acetyltransferase acetylates H2AX following ionizing radiation, which then promotes ubiquitination of H2AX via the ubiquitin-conjugating enzyme UBC13; this TIP60-UBC13-dependent acetylation-then-ubiquitination is required for H2AX release from damaged chromatin, enhancing histone dynamics during DNA damage response. |
Ionizing radiation treatment of human cells, in vitro acetylation and ubiquitination assays, immunoprecipitation, chromatin fractionation |
Molecular and cellular biology |
High |
17709392
|
| 2008 |
FACT complex (Spt16/SSRP1) is an H2AX-associated factor that mediates exchange of H2AX with conventional H2A within nucleosomes; DNA-PK-mediated phosphorylation of H2AX facilitates this exchange by inducing nucleosomal conformational changes; PARP1-mediated poly-ADP-ribosylation of Spt16 inhibits FACT-dependent H2AX exchange. |
Purification of H2AX-associated factors, in vitro nucleosome exchange assay, DNA-PK and PARP1 activity assays |
Molecular cell |
High |
18406329
|
| 2006 |
H2AX phosphorylation (γ-H2AX) is required for DNA ladder formation during apoptosis but not for caspase-3 activation; JNK (activated by UVA) phosphorylates H2AX; H2AX phosphorylation is critical for DNA degradation by caspase-activated DNase (CAD) in vitro; H2AX-/- MEFs lack DNA fragmentation despite normal caspase-3/CAD activation. |
H2AX knockout MEFs, in vitro CAD-mediated DNA degradation assay, immunofluorescence, caspase activity assays |
Molecular cell |
High |
16818236
|
| 2006 |
DNA-PK is solely responsible for H2AX phosphorylation during apoptotic DNA fragmentation, while ATM is dispensable; DNA-PKcs autophosphorylation at S2056 precedes γ-H2AX induction in apoptosis; ATM is proteolytically degraded before DNA fragmentation, leaving DNA-PK as the predominant kinase in late apoptosis. |
ATM-/- and DNA-PKcs-/- cell lines, pharmacological kinase inhibition, immunoblotting for autophosphorylation, immunofluorescence in apoptotic vs non-apoptotic nuclei |
DNA repair |
High |
16567133
|
| 2003 |
DNA-PK can be activated by nucleosomes (via Ku binding to ends of nucleosomal DNA) and phosphorylates H2AX within nucleosomes; histone acetylation enhances H2AX phosphorylation by DNA-PK specifically when H2AX is nucleosome-associated but not in free form. |
In vitro kinase assay with reconstituted nucleosomes, DNA-PK activation assay, acetylated vs non-acetylated nucleosome substrates |
Nucleic acids research |
High |
14627815
|
| 2003 |
H2AX is required for the accumulation of Nbs1, 53BP1, Brca1, and other factors into IRIF; loss of a single H2AX allele compromises genomic integrity; restoration with wild-type H2AX rescues genomic stability and radiation resistance, but substitution of the conserved serine phosphorylation site (S→A or S→E) abolishes this rescue, establishing that serine phosphorylation is functionally essential. |
H2AX heterozygous and homozygous null mice, gene rescue with phosphorylation-site mutants, tumor analysis, cytogenetics |
Cell |
High |
12914701
|
| 2010 |
Wip1 (wild-type p53-induced phosphatase 1) directly dephosphorylates γ-H2AX in vitro and in vivo; ectopic Wip1 expression prematurely removes γ-H2AX, disrupts repair factor recruitment to damage sites, and delays DNA repair; Wip1 deletion enhances γ-H2AX in cells under oncogenic stress. |
In vitro phosphatase assay, ectopic expression, Wip1 deletion cells, immunofluorescence of repair foci |
Cancer research |
High |
20460517
|
| 2011 |
Monoubiquitination of H2AX at Lys119/Lys120 by the RNF2-BMI1 E3 ligase complex is required for efficient γ-H2AX formation and ATM recruitment to DSBs; H2AX K120R mutation (abolishing monoubiquitination) impairs p-ATM recruitment, reduces γ-H2AX and MDC1 accumulation at DSBs, and impairs NBS1 and CHK2 activation; the regulatory effect of RNF2-BMI1 on γ-H2AX is ATM-dependent. |
Site-directed mutagenesis of H2AX (K119/120R), RNF2-BMI1 Co-IP, siRNA knockdown, immunofluorescence foci analysis, ionizing radiation |
The Journal of biological chemistry |
High |
21676867
|
| 2014 |
SUV39H2 histone methyltransferase methylates H2AX on lysine 134; mutation of K134 significantly reduces γ-H2AX levels; Suv39h2 knockout or knockdown reduces γ-H2AX after DSB induction; K134 methylation positively correlates with γ-H2AX levels in clinical tissue samples. |
In vitro methyltransferase assay, H2AX K134 mutagenesis, Suv39h2 KO cells, tissue microarray, clonogenic survival |
Nature communications |
High |
25487737
|
| 2004 |
BRCA1 is required to recruit ATR to XY chromatin at the onset of meiotic sex chromosome inactivation (MSCI); ATR then phosphorylates H2AX on the sex chromosomes; in BRCA1-mutant pachytene cells, ATR mislocalizes and phosphorylates H2AX at aberrant autossomal sites, causing MSCI failure; rare cells where ATR correctly localizes to XY chromatin show H2AX phosphorylation and successful MSCI. |
Immunofluorescence colocalization in spermatocytes from BRCA1-mutant mice, co-staining of ATR and γH2AX |
Current biology : CB |
High |
15589157
|
| 2007 |
Phosphorylated H2AX (γH2AX) is required for FANCD2 recruitment to chromatin at stalled replication forks; FANCD2 binding to γH2AX is BRCA1-dependent; H2AX-deficient cells display an FA-like phenotype including excess chromatid-type aberrations and MMC hypersensitivity; this hypersensitivity is not increased by additional FANCD2 depletion, placing H2AX and FANCD2 in the same pathway. |
H2AX knockout mouse cells, non-phosphorylable H2AX mutant (S136A/S139A), MMC sensitivity, chromatin fractionation, immunofluorescence, genetic epistasis by double depletion |
The EMBO journal |
High |
17304220
|
| 2009 |
ATM and H2AX have complementary functions; combined ATM/H2AX deficiency causes embryonic lethality and dramatic genomic instability; severe instability in double-deficient cells is associated with a requirement for H2AX in repairing oxidative DNA damage that accumulates due to ATM deficiency. |
ATM/H2AX double-knockout mice and MEFs, genomic instability assays, embryonic lethality analysis |
Proceedings of the National Academy of Sciences of the United States of America |
High |
18599436
|
| 2008 |
H2AX is required for endothelial cell proliferation under hypoxic conditions; hypoxia induces replication-associated γ-H2AX in endothelial cells; H2AX deficiency reduces hypoxia-driven neovascularization in pathologic proliferative retinopathy, hind-limb ischemia, and tumor angiogenesis; endothelial-specific H2afx deletion recapitulates this phenotype. |
H2afx-/- mice, endothelial-specific conditional knockout, in vitro hypoxic cell proliferation assays, retinal neovascularization and tumor angiogenesis models |
Nature medicine |
High |
19377486
|
| 2009 |
H2AX is required for p21-dependent cell cycle arrest after replication stalling; in H2AX-deficient cells, p21 undergoes proteasome-dependent degradation after stalled replication, leading to mitotic catastrophe; H2AX-proficient cells increase p21 levels and arrest the cell cycle; this establishes H2AX as a component of the p53/p21 cell cycle checkpoint pathway. |
H2AX-/- cells and RNAi knockdown, AAV-induced stalled replication, flow cytometry, proteasome inhibitor rescue, H2AX complementation |
Molecular and cellular biology |
High |
19273588
|
| 2010 |
H2AX prevents CtIP-mediated DNA end resection of hairpin-sealed coding ends in G1-phase lymphocytes; γ-H2AX and its reader MDC1 inhibit CtIP access; ATM activates antagonistic pathways modulating this resection; in H2AX-deficient cells, CtIP promotes aberrant hairpin opening, leading to microhomology-mediated joins and chromosomal deletions. |
H2AX-/- murine lymphocytes, RAG endonuclease-generated DSB analysis, CtIP knockdown epistasis, sequencing of joins, chromosomal deletion analysis |
Nature |
High |
21160476
|
| 2012 |
H2AX increases ROS generation after DNA damage through the Nox1/Rac1 pathway; H2AX overexpression alone induces ROS; H2AX reduces interaction between Nox1 activator NOXA1 and its inhibitor 14-3-3ζ, thereby increasing Nox1 activity; Nox1 knockdown or Rac1N17 expression reduces H2AX-mediated ROS and cell death. |
H2AX overexpression/knockdown, Nox1/Nox4 siRNA, Rac1 dominant-negative expression, ROS measurement, co-immunoprecipitation of NOXA1/14-3-3ζ |
Cell death & disease |
Medium |
22237206
|
| 2012 |
In MNNG-induced caspase-independent necroptosis, ATM and DNA-PK phosphorylate H2AX at S139 in a synergistic but temporally distinct manner (ATM early, DNA-PK later); γH2AX associates with AIF and CypA to form a DNA-degrading complex; H2AX S139A mutation or H2AX ablation abolishes chromatinolysis and necroptosis; phosphomimetic H2AX S139E rescues necroptosis in H2AX-/- cells. |
H2AX-/- cells, S139A/S139E mutant reconstitution, ATM/DNA-PK knockout and pharmacological inhibition, AIF co-immunoprecipitation |
Cell death & disease |
High |
22972376
|
| 2014 |
Dub3 ubiquitin hydrolase deubiquitinates H2AX; Dub3 directly interacts with H2AX and deubiquitinates it in vitro; Dub3 overexpression decreases DSB-induced H2AX monoubiquitination and abrogates 53BP1 and BRCA1 focus formation (but not MDC1/γH2AX foci); Dub3 counteracts RNF8 and RNF168 E3 ligases; Dub3 depletion accelerates H2AX dephosphorylation at later time points. |
In vitro deubiquitination assay, Co-immunoprecipitation, RNF8/RNF168 counter-assay, immunofluorescence foci analysis, catalytic dead mutant |
Molecular oncology |
High |
24704006
|
| 2016 |
Chronic oxidative stress reduces H2AX protein levels via enhanced interaction with E3 ubiquitin ligase RNF168, leading to H2AX poly-ubiquitination and proteasomal degradation; deficient JunD/Nrf2 antioxidant response drives ROS accumulation and H2AX destabilization. |
Co-immunoprecipitation of H2AX and RNF168, ubiquitination assays, proteasome inhibitor rescue, JunD/Nrf2 manipulation, breast cancer cell lines and patient samples |
EMBO molecular medicine |
Medium |
27006338
|
| 2019 |
PRMT5 sustains RNF168 expression, which stabilizes H2AX protein; in the absence of RNF168 (due to PRMT5 suppression in MTAP-deficient cells), the E3 ubiquitin ligase SMURF2 destabilizes H2AX; RNF168 and SMURF2 dynamically interact with H2AX acting as stabilizer and destabilizer respectively, defining a PRMT5-RNF168-SMURF2 cascade controlling H2AX proteostasis. |
PRMT5/RNF168/SMURF2 knockdown and overexpression, Co-IP, ubiquitination assays, MTAP-deficient glioblastoma cell models |
Cell reports |
Medium |
31533041
|
| 2020 |
H2AX glutamate 141 (E141) is ADP-ribosylated following oxidative DNA damage; this modification mediates recruitment of Neil3 glycosylase to DNA damage sites for base excision repair (BER); ADP-ribosylation-deficient H2AX E141A mutant enhances γH2AX (S139 phosphorylation) and erroneously accumulates DSB response factors at BER sites. |
Unbiased mass spectrometry identification of ADP-ribosylation site, E141A mutagenesis, Neil3 recruitment assays, comparison of BER vs DSB response factors |
The EMBO journal |
High |
33264433
|
| 2023 |
SIRT1 deacetylates H2AX at Lys5, and this deacetylation is required for efficient Ser139 phosphorylation of H2AX; SIRT1 knockdown increases acetyl-Lys5-H2AX and blunts γ-H2AX formation; H2AX K5Q (acetylation mimic) mutant shows reduced Ser139 phosphorylation in response to doxorubicin; K5Q and S139A mutants both enhance caspase-3 activation, demonstrating functional consequence of SIRT1-H2AX axis. |
Cardiomyocyte-specific Sirt1 conditional knockout mice, SIRT1 knockdown/overexpression in H9c2 cells, K5Q mutant H2AX, immunostaining for acetyl-K5 and phospho-S139 H2AX, caspase-3 assay |
Cardiovascular research |
High |
35258628
|
| 2015 |
H2AX controls double-strand break repair by homologous recombination (HR) between sister chromatids through interaction of γ-H2AX with the chromatin-associated adaptor protein MDC1; mass spectrometry identified novel IR-responsive post-translationally modified residues of H2AX beyond S139; HR and IR-resistance functions of H2AX are controlled largely by MDC1-interacting residues, with additional H2AX residues modulating these functions. |
Mass spectrometry of IR-treated cells, mutagenesis of H2AX residues, HR assay (sister chromatid recombination), clonogenic survival |
Cell cycle (Georgetown, Tex.) |
Medium |
20703100
|
| 2008 |
ATR deficiency leads to H2AX phosphorylation by ATM and DNA-PKcs at collapsed replication forks; increased Rad51 focal accumulation in ATR-deficient cells is largely H2AX-dependent; dual deficiency of ATR and H2AX causes synergistic increases in chromatid breaks; H2AX S139 (the ATM/DNA-PK phosphorylation site) is required for genome stabilization in the absence of ATR. |
ATR-deficient and H2AX-deficient cells, S139A H2AX mutant, cytogenetic analysis, Rad51 immunofluorescence, genetic double-deficiency |
The Journal of biological chemistry |
High |
19049966
|
| 2005 |
ATM-dependent H2AX phosphorylation occurs during mitosis in normally growing mammalian cells independently of exogenous DNA damage; two distinct γ-H2AX focal populations exist in unirradiated cells: large amorphous foci colocalizing with DSB repair proteins and smaller foci that do not recruit DSB repair factors; the mitotic γ-H2AX phosphorylation may contribute to fidelity of mitosis independent of DNA damage. |
Quantitative in situ immunofluorescence, cell cycle analysis, ATM-inhibitor treatment, multiple unirradiated mammalian cell lines |
Molecular biology of the cell |
Medium |
16030261
|
| 2020 |
Chromosomal contacts (topological structure) of a DSB site are the primary determinants of γH2AX domain landscapes; DSBs that disrupt a topological border allow γH2AX extension into both adjacent compartments; DSBs near a border produce highly asymmetric γH2AX domains with γH2AX nearly absent from one broken end. |
Hi-C chromosome conformation capture combined with γH2AX ChIP-seq at specific DSB sites |
Nature communications |
High |
32572033
|
| 2015 |
VRK1 kinase directly phosphorylates H2AX at Ser139 in response to ionizing radiation; VRK1 stably interacts with H2AX and H3 under basal conditions; VRK1 depletion prevents γH2AX foci formation and reduces H3/H4 acetylation required for chromatin relaxation after DNA damage; kinase-active but not kinase-dead VRK1 rescues γH2AX foci formation. |
In vitro kinase assay with nucleosomal substrate, co-immunoprecipitation, VRK1 depletion/rescue with kinase-dead mutant, immunofluorescence |
Epigenetics |
High |
25923214
|
| 2003 |
H2AX regulates telomere clustering during meiotic prophase I; H2AX is dispensable for mitotic telomere maintenance and for chromosome fusions from critically shortened or deprotected telomeres; H2AX is required downstream of ATM for proper topological distribution of telomeres during meiosis. |
H2AX-/- mice, meiotic spread immunofluorescence, telomere FISH, ATM inhibitor treatment |
The Journal of cell biology |
Medium |
14530383
|
| 2021 |
HMGA2 induces DNA nicks at transcription start sites, which triggers FACT complex to incorporate H2AX-containing nucleosomes; phosphorylation of H2AX at S139 (γH2AX) is then required for repair-mediated DNA demethylation and transcription activation in the context of TGFB1 signaling. |
HMGA2 manipulation, H2AX S139 mutation, FACT complex assays, DNA methylation analysis, transcription start site occupancy |
Nature communications |
Medium |
33594057
|
| 2015 |
Phosphorylated H2AFX (γH2AFX) on asynapsed chromosomes during meiotic prophase I triggers oocyte elimination at diplonema in mice with chromosome abnormalities (XO and translocations); deletion or point mutation of H2afx restores oocyte numbers in XO females to wild-type (XX) levels, establishing γH2AFX as a causal mediator of oocyte elimination. |
H2afx knockout and point mutant mice (XO background), oocyte counting, γH2AFX immunostaining, chromosomal asynapsis analysis |
PLoS genetics |
High |
26509888
|
| 2018 |
MOF histone acetyltransferase (which generates H4K16ac) is required for the chromatin-wide expansion of all three waves of H2AX phosphorylation during male meiotic prophase I; without MOF, γH2AX signals are restricted to chromosomal axes and fail to expand to broad chromatin domains; MSCI fails in ~40% of Mof cKO pachytene cells; MOF facilitates meiotic DSB repair after RAD51 recruitment. |
Germ cell-specific Mof conditional knockout mice (Stra8-Cre), γH2AX immunostaining, MDC1 colocalization, RAD51 recruitment assay, crossover analysis |
PLoS genetics |
High |
29795555
|
| 2020 |
UBE2T-RNF8 acts as an E2-E3 pair that monoubiquitinates H2AX/γH2AX at K119/K120 upon radiation exposure; this monoubiquitination facilitates CHK1 phosphorylation/activation and promotes CHK1 release from chromatin; mutations in UBE2T (C86A, E2-dead) or H2AX (K119/120R) abolish CHK1 activation; CHK1 inhibition impairs UBE2T-mediated radioresistance. |
Co-IP of UBE2T with H2AX, K119/120R H2AX mutant, C86A UBE2T mutant, CHK1 chromatin fractionation, clonogenic survival, xenograft models |
Journal of experimental & clinical cancer research : CR |
Medium |
33087136
|