Affinage

GPR180

Integral membrane protein GPR180 · UniProt Q86V85

Length
440 aa
Mass
49.4 kDa
Annotated
2026-06-10
30 papers in source corpus 5 papers cited in narrative 5 extracted findings
Cross-family judge faithfulness: 5/5 claims corpus-supported (100%)

Mechanistic narrative

Synthesis pass · prose summary of the discoveries below

GPR180 is a multi-pass membrane protein that acts as a regulator of TGFβ signalling and lipid metabolism rather than as a canonical G protein-coupled receptor (PMID:34880217, PMID:39609618). Structurally it belongs to the GOST family, with a crystallographically resolved N-terminal GOLD-like domain and a seven-transmembrane region; it localises to intracellular vesicular structures and undergoes pH-dependent conformational changes that map to a putative ligand-binding site in the transmembrane region, consistent with sensing the acidic vesicular environment (PMID:39609618). Functionally, GPR180 operates downstream of CTHRC1 and upstream of the TGFβ receptor complex, promoting SMAD3 phosphorylation, and this CTHRC1/GPR180 axis is required for control of brown/beige adipocyte activity and glucose homeostasis (PMID:34880217). In the liver, GPR180 acts upstream of mTORC1/SREBP1: its loss reduces mTOR phosphorylation and SREBP1 activation and ameliorates hepatic and plasma lipids after high-fat diet, with hepatic re-expression restoring the lipid phenotype (PMID:36726016). In white adipocytes, GPR180 directly inhibits lipogenesis and fatty acid uptake, and its overexpression protects mice from diet-induced obesity while adipocyte-specific deletion worsens lipid handling (PMID:39925142).

Mechanistic history

Synthesis pass · year-by-year structured walk · 5 steps
  1. 2003 Low

    Before any functional study, the genomic identity of human ITR/GPR180 had to be established, defining the locus as a candidate seven-transmembrane receptor gene associated with vascular remodeling.

    Evidence Genomic sequencing, structure determination, and SNP mapping across the 13q31 locus in 48 individuals

    PMID:12730718

    Open questions at the time
    • No functional experiment was performed on the protein itself
    • The annotation as a rhodopsin-like GPCR was inferred from sequence, not activity
    • No link to any signalling pathway or ligand was established
  2. 2021 Medium

    The key question of what pathway GPR180 belongs to was answered by placing it not as a classical GPCR but as a component of TGFβ signalling acting in a CTHRC1-dependent branch.

    Evidence Knockout/knockdown and pharmacological tools in adipocyte models and mice; SMAD3 phosphorylation assays and epistasis positioning GPR180 downstream of CTHRC1 and upstream of the TGFβ receptor

    PMID:34880217

    Open questions at the time
    • No in vitro reconstitution of the GPR180–TGFβ receptor interaction
    • Direct physical binding to CTHRC1 or the receptor complex not demonstrated
    • Mechanism by which GPR180 modulates SMAD3 phosphorylation unresolved
  3. 2023 Medium

    Whether GPR180 has metabolic functions beyond adipocyte thermogenesis was addressed by showing it regulates hepatic lipid metabolism upstream of mTORC1/SREBP1.

    Evidence Gpr180 knockout mice on high-fat diet, AAV8 hepatic rescue, transcriptomics, and Western blots for p-mTOR and activated SREBP1 in mouse liver and Huh7 cells

    PMID:36726016

    Open questions at the time
    • Molecular link between GPR180 and mTOR activation not defined
    • Whether the hepatic effect depends on the CTHRC1/TGFβ axis is unknown
    • No identified upstream ligand driving hepatic signalling
  4. 2025 Medium

    The cell-autonomous metabolic role in white adipocytes was clarified by demonstrating GPR180 directly suppresses lipogenesis and fatty acid uptake to limit adiposity.

    Evidence AAV overexpression in subcutaneous adipose tissue, adipocyte-specific knockout mice, and lipogenesis/fatty acid uptake assays in SVF-derived adipocytes

    PMID:39925142

    Open questions at the time
    • Direct molecular effectors of lipogenesis/uptake suppression not identified
    • Relationship to the hepatic mTORC1/SREBP1 mechanism unclear
    • Whether SMAD3 signalling mediates the adipocyte phenotype not tested
  5. 2024 High

    The structural and subcellular basis of GPR180 function was established by assigning it to the GOST family with a GOLD-like N-terminal domain and showing it acts within intracellular acidic vesicles.

    Evidence X-ray crystallography of the N-terminal domain (1.9 Å), cellular imaging of vesicular localization, and HDX-MS mapping of pH-dependent conformational changes

    PMID:39609618

    Open questions at the time
    • No endogenous ligand identified for the putative transmembrane binding site
    • How vesicular localization reconciles with plasma-membrane TGFβ receptor signalling is unresolved
    • Full-length structure including the transmembrane region not determined

Open questions

Synthesis pass · forward-looking unresolved questions
  • It remains unknown how GPR180's structural and vesicular biology mechanistically connects its disparate roles in TGFβ/SMAD3 signalling, hepatic mTORC1/SREBP1 regulation, and adipocyte lipid handling.
  • No identified physiological ligand engaging the transmembrane pocket
  • Direct physical partners in the TGFβ receptor complex unconfirmed
  • Causal chain linking vesicular conformational changes to downstream signalling not established

Mechanism profile

Synthesis pass · controlled-vocabulary classification · explore literature graph →
Molecular activity
GO:0060089 molecular transducer activity 1
Localization
GO:0031410 cytoplasmic vesicle 1
Pathway
R-HSA-1430728 Metabolism 2 GO:0140110 transcription regulator activity 1 R-HSA-162582 Signal Transduction 1
Partners

Evidence

Reading pass · 5 per-paper findings extracted from the source corpus
Year Finding Method Journal Conf PMIDs
2021 GPR180 is not a canonical GPCR but functions as a component of the TGFβ signalling pathway, regulating the activity of the TGFβ receptor complex through SMAD3 phosphorylation. GPR180 is required for CTHRC1 (Collagen triple helix repeat containing 1) to exert its effects on brown/beige adipocyte activity and glucose homeostasis, defining a CTHRC1/GPR180 axis as an alternative branch of TGFβ signalling. Genetic (knockout/knockdown) and pharmacological tools in adipocyte cell models and mice; SMAD3 phosphorylation assays; epistasis experiments placing GPR180 downstream of CTHRC1 and upstream of TGFβ receptor signalling Nature communications Medium 34880217
2024 GPR180 belongs to the GOST (Golgi-dynamics domain seven-transmembrane helix) protein family. X-ray crystallography of the N-terminal domain (1.9 Å resolution) confirmed structural homology to GOLD domains. Cellular imaging localised GPR180 to intracellular vesicular structures, implying exposure to acidic pH environments. HDX-MS identified pH-dependent conformational changes mapping to a putative ligand-binding site in the transmembrane region, revealing a role for GPR180 in intracellular vesicles. X-ray crystallography (1.9 Å); cellular imaging (localization to vesicular structures); Hydrogen/Deuterium Exchange Mass Spectrometry (HDX-MS) for conformational analysis Communications biology High 39609618
2023 Ablation of GPR180 in mice ameliorated hepatic and plasma lipid levels after high-fat diet, mediated by downregulation of mTORC1 signalling; specifically, GPR180 KO showed weakened phosphorylation of mTOR and decreased activated SREBP1 in both Gpr180 KO mice and a human hepatoma cell line (Huh7). Hepatic rescue of GPR180 expression via AAV8 in KO mice restored plasma and hepatic lipid levels, confirming GPR180 acts upstream of mTORC1/SREBP1 in hepatic lipid metabolism. Gpr180 knockout mice; shRNA knockdown via AAV8; transcriptome analysis; Western blot for p-mTOR and activated SREBP1; AAV8-mediated hepatic rescue experiment Scientific reports Medium 36726016
2025 GPR180 reduces adiposity by inhibiting lipogenesis and fatty acid uptake in adipocytes. Adeno-associated virus-mediated overexpression of Gpr180 in subcutaneous white adipose tissue improved lipid metabolism and protected mice from HFD-induced obesity, while adipocyte-specific knockout of Gpr180 exacerbated lipid metabolism disorders. In cultured adipocytes differentiated from stromal vascular fraction cells, GPR180 directly inhibited lipogenesis and fatty acid uptake. AAV-mediated overexpression in subcutaneous adipose tissue; adipocyte-specific Gpr180 knockout mice; stromal vascular fraction (SVF) cell culture lipogenesis and fatty acid uptake assays American journal of physiology. Endocrinology and metabolism Medium 39925142
2003 The human ITR (GPR180) gene was mapped to chromosome 13q31, spans 27,452 bp with nine exons, and encodes a rhodopsin-like G protein-coupled receptor described as associated with vascular remodeling. A high-density SNP map was constructed from 48 individuals, identifying 22 SNPs across the locus. Genomic sequencing; SNP mapping from 48 healthy Japanese individuals; genomic structure determination Journal of human genetics Low 12730718

Source papers

Stage 0 corpus · 30 papers · ranked by NIH iCite citations
Year Title Journal Citations PMID
1999 Inositol 1,4,5-trisphosphate receptors are strongly expressed in the nervous system, pharynx, intestine, gonad and excretory cell of Caenorhabditis elegans and are encoded by a single gene (itr-1). Journal of molecular biology 74 10610772
2013 Feasibility of interactive text message response (ITR) as a novel, real-time measure of adherence to antiretroviral therapy for HIV+ youth. AIDS and behavior 52 23546844
2020 ITR-Seq, a next-generation sequencing assay, identifies genome-wide DNA editing sites in vivo following adeno-associated viral vector-mediated genome editing. BMC genomics 46 32183699
2021 Rational engineering of a functional CpG-free ITR for AAV gene therapy. Gene therapy 45 34611321
2003 Helper-independent and AAV-ITR-independent chromosomal integration of double-stranded linear DNA vectors in mice. Molecular therapy : the journal of the American Society of Gene Therapy 45 12573623
1994 Recognition of related proteins by iterative template refinement (ITR). Protein science : a publication of the Protein Society 40 7987226
2005 Mariner Mos1 transposase dimerizes prior to ITR binding. Journal of molecular biology 38 15992822
2001 Dissection of the promoter region of the inositol 1,4,5-trisphosphate receptor gene, itr-1, in C. elegans: a molecular basis for cell-specific expression of IP3R isoforms. Journal of molecular biology 36 11237590
2022 Direct ITR-to-ITR Nanopore Sequencing of AAV Vector Genomes. Human gene therapy 27 36178359
2001 Creation of a new transgene cloning site near the right ITR of Ad5 results in reduced enhancer interference with tissue-specific and regulatable promoters. Gene therapy 27 11313797
2021 GPR180 is a component of TGFβ signalling that promotes thermogenic adipocyte function and mediates the metabolic effects of the adipocyte-secreted factor CTHRC1. Nature communications 26 34880217
2023 Extensive ITR expansion of the 2022 Mpox virus genome through gene duplication and gene loss. Virus genes 21 37256469
2024 A self-complementary AAV proviral plasmid that reduces cross-packaging and ITR promoter activity in AAV vector preparations. Molecular therapy. Methods & clinical development 15 39139628
2009 Investigation of anti-leukemia molecular mechanism of ITR-284, a carboxamide analog, in leukemia cells and its effects in WEHI-3 leukemia mice. Biochemical pharmacology 15 19765549
2024 A novel class of self-complementary AAV vectors with multiple advantages based on cceAAV lacking mutant ITR. Molecular therapy. Methods & clinical development 14 38390555
2021 Interstitial Telomeric-like Repeats (ITR) in Seed Plants as Assessed by Molecular Cytogenetic Techniques: A Review. Plants (Basel, Switzerland) 11 34834904
2003 High-density SNP map of human ITR, a gene associated with vascular remodeling. Journal of human genetics 10 12730718
2020 Microcoria due to first duplication of 13q32.1 including the GPR180 gene and maternal mosaicism. European journal of medical genetics 8 32200002
2023 Quantitative analysis of preferential utilization of AAV ITR as the packaging terminal signal. Frontiers in bioengineering and biotechnology 7 38173872
2020 Isfahan Twins Registry (ITR): An Invaluable Platform for Epidemiological and Epigenetic Studies: Design and Methodology of ITR. Twin research and human genetics : the official journal of the International Society for Twin Studies 5 31955715
2017 Carboxamide analog ITR-284 evokes apoptosis and inhibits migration ability in human lung adenocarcinoma A549 cells. Oncology reports 5 28098885
2023 Lack of GPR180 ameliorates hepatic lipid depot via downregulation of mTORC1 signaling. Scientific reports 4 36726016
2017 Highly Efficient and Stable Organic Solar Cells via Interface Engineering with a Nanostructured ITR-GO/PFN Bilayer Cathode Interlayer. Nanomaterials (Basel, Switzerland) 4 28832508
2017 ITR‑284 modulates cell differentiation in human chronic myelogenous leukemia K562 cells. Oncology reports 3 29138846
2013 The novel carboxamide analog ITR-284 induces caspase-dependent apoptotic cell death in human hepatocellular and colorectal cancer cells. Molecular medicine reports 3 23468003
2024 GPR180 is a new member of the Golgi-dynamics domain seven-transmembrane helix protein family. Communications biology 2 39609618
2025 GPR180 reduces adiposity by inhibiting lipogenesis and fatty acid uptake in adipocytes. American journal of physiology. Endocrinology and metabolism 1 39925142
2025 AAV Genome Topology Decides ITR Secondary Structure. BioEssays : news and reviews in molecular, cellular and developmental biology 0 40045668
2020 Correction to: ITR-Seq, a next-generation sequencing assay, identifies genome-wide DNA editing sites in vivo following adeno-associated viral vector-mediated genome editing. BMC genomics 0 33218308
2003 Progressive Rearrangement of Telomeric Sequences Added to Both the ITR Ends of the Yeast Linear pGKL Plasmid. Biological procedures online 0 12734558

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