Affinage

GIMAP7

GTPase IMAP family member 7 · UniProt Q8NHV1

Length
300 aa
Mass
34.5 kDa
Annotated
2026-06-10
20 papers in source corpus 6 papers cited in narrative 6 extracted findings
Cross-family judge vs UniProt: Affinage preferred faithfulness: 4/5 claims corpus-supported (80%)

Mechanistic narrative

Synthesis pass · prose summary of the discoveries below

GIMAP7 is a GTP-hydrolyzing member of the immunity-associated protein family that uses nucleotide-dependent self-association to regulate its own and partner GTPase activity, and acts as a membrane-associated modulator of autophagy and stress signaling (PMID:23454188, PMID:35551368). Structurally, it homodimerizes through its G domains and achieves dimerization-stimulated GTP hydrolysis via a trans-acting catalytic arginine finger, a mechanism it also extends in trans to stimulate hydrolysis by GIMAP2 (PMID:23454188). Within cells it associates with membranous organelles including lipid droplets, the ER, Golgi, and lysosomes (PMID:23454188, PMID:40728050). GIMAP7 functions in a tripartite GIMAP6–GABARAPL2–GIMAP7 complex required for normal autophagy and redox control in lymphocytes (PMID:35551368), and directly binds LC3B to convert incomplete autophagy flux into complete flux, coupling autophagy to apoptosis (PMID:40728050). In epithelial contexts GIMAP7 acts upstream of hedgehog-axis signaling, suppressing SHH/SMO/Gli1 in granulosa cells and Smo/AMPK signaling in lung adenocarcinoma cells, thereby restraining oxidative stress, EMT, and glycolysis (PMID:36581994, PMID:38151913).

Mechanistic history

Synthesis pass · year-by-year structured walk · 6 steps
  1. 2013 High

    Established the biochemical identity of GIMAP7 as a GTPase and defined how its catalytic activity is controlled, answering how the protein hydrolyzes GTP and acts on a family member.

    Evidence Crystal structure of GTP-bound GIMAP7 with in vitro GTPase assays and catalytic-arginine mutagenesis, plus lipid droplet fractionation

    PMID:23454188

    Open questions at the time
    • Physiological trigger for homo- versus heterodimerization in cells not defined
    • Functional consequence of lipid-droplet localization untested
    • No cellular phenotype linked to the trans-arginine mechanism
  2. 2022 Medium

    Placed GIMAP7 in a defined protein complex with GIMAP6 and GABARAPL2 linking its GTPase activity to autophagy and redox regulation in immune cells.

    Evidence Co-IP, GTPase assays, Gimap6-/- mice and GIMAP6-mutant patient cells

    PMID:35551368

    Open questions at the time
    • GIMAP7's individual contribution within the complex not isolated
    • Stoichiometry and assembly order unknown
    • Direct GIMAP7-GABARAPL2 contact not resolved
  3. 2022 Medium

    Connected GIMAP7 to hedgehog signaling, showing it acts upstream of SHH/SMO/Gli1 to control oxidative stress, apoptosis, and proliferation in granulosa cells.

    Evidence siRNA knockdown in KGN cells and a PCOS rat model with pharmacological cyclopamine rescue

    PMID:36581994

    Open questions at the time
    • Molecular link between GIMAP7 GTPase activity and SHH pathway unresolved
    • Whether the effect is direct or indirect unknown
    • Single tissue context
  4. 2023 Medium

    Extended GIMAP7's signaling role to tumor suppression in lung adenocarcinoma by demonstrating it inhibits Smo/AMPK-driven EMT and glycolysis.

    Evidence Gain- and loss-of-function in LUAD lines with metabolic assays, xenografts, and SAG/GSK621 pharmacological rescue

    PMID:38151913

    Open questions at the time
    • Direct binding partner mediating Smo/AMPK suppression unidentified
    • Relationship to GTPase mechanism unclear
    • Single lab
  5. 2023 Low

    Associated GIMAP7 induction with downregulation of Rho/ROCK1 signaling in T cells, hinting at a role upstream of inflammatory GTPase pathways.

    Evidence RNA-seq of T cells from a nasal Foralumab clinical trial with pathway analysis

    PMID:36881624

    Open questions at the time
    • Transcriptomic correlation only; no direct manipulation of GIMAP7
    • Causality between GIMAP7 and Rho/ROCK1 not established
    • Mechanism unknown
  6. 2025 Medium

    Defined a direct GIMAP7-LC3B interaction at membranous organelles that completes autophagy flux and triggers apoptosis, linking GIMAP7 to antiviral autophagy.

    Evidence Co-IP, subcellular imaging, autophagy flux readouts, and pharmacological GIMAP7 activation (narirutin, periplocin) in RSV infection models

    PMID:40728050

    Open questions at the time
    • LC3B-binding region of GIMAP7 not mapped
    • Whether GTPase activity is required for LC3B binding untested
    • Generality beyond RSV/lung cells unknown

Open questions

Synthesis pass · forward-looking unresolved questions
  • How GIMAP7's biochemical GTPase mechanism mechanistically connects to its diverse downstream roles in autophagy, hedgehog/AMPK signaling, and redox control remains unresolved.
  • No unifying mechanism linking GTP hydrolysis to signaling outputs
  • No structure of GIMAP7 in complex with LC3B or signaling partners
  • Tissue-specific roles not reconciled

Mechanism profile

Synthesis pass · controlled-vocabulary classification · explore literature graph →
Molecular activity
GO:0003924 GTPase activity 2 GO:0098772 molecular function regulator activity 1
Localization
GO:0005764 lysosome 1 GO:0005783 endoplasmic reticulum 1 GO:0005794 Golgi apparatus 1 GO:0005811 lipid droplet 1
Pathway
R-HSA-162582 Signal Transduction 2 R-HSA-9612973 Autophagy 2
Complex memberships
GIMAP6–GABARAPL2–GIMAP7 complex

Evidence

Reading pass · 6 per-paper findings extracted from the source corpus
Year Finding Method Journal Conf PMIDs
2013 GIMAP7 forms a homodimer via its G domains, with helical extensions protruding in opposite directions, and displays dimerization-stimulated GTP hydrolysis. A catalytic arginine is supplied in trans from one monomer to the opposing monomer to stimulate GTP hydrolysis (trans-acting arginine finger mechanism). GIMAP7 also stimulates GTP hydrolysis by GIMAP2 via an analogous heterodimerization mechanism. GIMAP7 was identified on lipid droplets. Crystal structure of GTP-bound GIMAP7, in vitro GTPase assays, site-directed mutagenesis of catalytic arginine, co-localization/lipid droplet fractionation Structure High 23454188
2022 GIMAP6 forms a complex with GABARAPL2 and GIMAP7 to regulate GTPase activity; this tripartite complex is required for normal autophagy and redox regulation in lymphocytes. Co-immunoprecipitation, GTPase activity assays, Gimap6-/- mouse model, patient-derived cells with GIMAP6 mutations The Journal of experimental medicine Medium 35551368
2023 Nasal anti-CD3 (Foralumab) treatment increased GIMAP7 expression in T cells, and downstream Rho/ROCK1 GTPase signaling was concurrently downregulated, placing GIMAP7 upstream of Rho/ROCK1 in T cell inflammatory signaling. RNA-sequencing of T cells from randomized clinical trial participants treated with nasal Foralumab; pathway analysis of downstream GTPase signaling Proceedings of the National Academy of Sciences of the United States of America Low 36881624
2022 GIMAP7 silencing in ovarian granulosa cells (KGN cells and PCOS rat model) reduced oxidative stress (decreased ROS, MDA; increased GSH, SOD), inhibited apoptosis, and promoted proliferation. GIMAP7 suppresses the sonic hedgehog (SHH) signaling pathway; inhibition of SHH with cyclopamine reversed the pro-proliferative/anti-apoptotic effects of GIMAP7 knockdown, placing GIMAP7 upstream of SHH/SMO/Gli1 signaling. siRNA knockdown in KGN cells, PCOS rat model with GIMAP7 silencing, western blot, flow cytometry, pharmacological rescue with cyclopamine (SHH inhibitor) Journal of ovarian research Medium 36581994
2023 GIMAP7 overexpression in lung adenocarcinoma (LUAD) cells inhibited proliferation, migration, EMT, and glycolysis, and promoted apoptosis. GIMAP7 suppresses the Smo/AMPK signaling pathway; rescue experiments using SMO agonist SAG and AMPK agonist GSK621 restored EMT and glycolysis, confirming GIMAP7 acts through inhibition of Smo/AMPK signaling. Plasmid overexpression and siRNA knockdown in LUAD cell lines, CCK-8/EdU/colony formation/flow cytometry/wound healing/transwell assays, ECAR/OCR metabolic measurements, western blot, xenograft tumor model, pharmacological rescue Thoracic cancer Medium 38151913
2025 GIMAP7 resides within membranous organelles including the Golgi apparatus, endoplasmic reticulum, and lysosomes in lung cells. GIMAP7 directly interacts with LC3B (autophagosome marker), and this interaction converts RSV-induced incomplete autophagy flux into complete autophagy, triggering apoptosis and reducing RSV replication. GIMAP7 agonists narirutin and periplocin activate GIMAP7 expression and stimulate complete autophagy flux and apoptosis. Immunoprecipitation (GIMAP7–LC3B interaction), subcellular localization imaging, western blot, RT-qPCR, overexpression experiments, in vivo and in vitro pharmacological activation Journal of medical virology Medium 40728050

Source papers

Stage 0 corpus · 20 papers · ranked by NIH iCite citations
Year Title Journal Citations PMID
2019 Genome-Wide Association Transethnic Meta-Analyses Identifies Novel Associations Regulating Coagulation Factor VIII and von Willebrand Factor Plasma Levels. Circulation 136 30586737
2015 Extensive variation between tissues in allele specific expression in an outbred mammal. BMC genomics 70 26596891
2015 Transcriptomic and proteomic analyses of splenic immune mechanisms of rainbow trout (Oncorhynchus mykiss) infected by Aeromonas salmonicida subsp. salmonicida. Journal of proteomics 66 25849251
2013 Structural insights into the mechanism of GTPase activation in the GIMAP family. Structure (London, England : 1993) 42 23454188
2019 The relevance between the immune response-related gene module and clinical traits in head and neck squamous cell carcinoma. Cancer management and research 36 31496804
2023 PCSK9 facilitates melanoma pathogenesis via a network regulating tumor immunity. Journal of experimental & clinical cancer research : CR 34 36588164
2023 Nasal administration of anti-CD3 mAb (Foralumab) downregulates NKG7 and increases TGFB1 and GIMAP7 expression in T cells in subjects with COVID-19. Proceedings of the National Academy of Sciences of the United States of America 19 36881624
2020 Transcriptomic study in women with trisomy 21 identifies a possible role of the GTPases of the immunity-associated proteins (GIMAP) in the protection of breast cancer. Scientific reports 16 32523132
2022 GIMAP6 regulates autophagy, immune competence, and inflammation in mice and humans. The Journal of experimental medicine 15 35551368
2022 GIMAP7 induces oxidative stress and apoptosis of ovarian granulosa cells in polycystic ovary syndrome by inhibiting sonic hedgehog signalling pathway. Journal of ovarian research 13 36581994
2019 Identification of GIMAP7 and Rabl3 as Putative Biomarkers for Oral Squamous Cell Carcinoma Through Comparative Proteomic Approach. Pathology oncology research : POR 9 31748878
2021 Gene Banks as Reservoirs to Detect Recent Selection: The Example of the Asturiana de los Valles Bovine Breed. Frontiers in genetics 8 33633776
2025 Identification of potential biomarkers associated with cuproptosis and immune microenvironment analysis in acute myocardial infarction: A diagnostic accuracy study. Medicine 5 39889200
2023 GIMAP7 inhibits epithelial-mesenchymal transition and glycolysis in lung adenocarcinoma cells via regulating the Smo/AMPK signaling pathway. Thoracic cancer 4 38151913
2025 Proteomic and phosphoproteomic profilings reveal distinct cellular responses during Tilapinevirus tilapiae entry and replication. PeerJ 3 39995988
2025 Uncovering Hippo pathway-related biomarkers in acute myocardial infarction via scRNA-seq binding transcriptomics. Scientific reports 3 40133574
2020 Analysis of T lymphocyte-related biomarkers in pancreatic cancer. Pancreatology : official journal of the International Association of Pancreatology (IAP) ... [et al.] 3 32952042
2026 Mechanistic investigation into the differences in growth performance and resistance to spring viremia of carp virus in common carp. Frontiers in immunology 0 41694347
2026 Proteome-wide Mendelian Randomization and Colocalization Nominate CD58, PARP1, and Immune Co-stimulatory Pathways as Genetically Supported Targets for Multiple Sclerosis. Current neuropharmacology 0 42227395
2025 Autophagy-to-Apoptosis Conversion Mediated by GIMAP7 Exhibit Anti-RSV Action. Journal of medical virology 0 40728050

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