Affinage

GIMAP7

GTPase IMAP family member 7 · UniProt Q8NHV1

Length
300 aa
Mass
34.5 kDa
Annotated
2026-04-28
19 papers in source corpus 6 papers cited in narrative 7 extracted findings

Mechanistic narrative

Synthesis pass · prose summary of the discoveries below

GIMAP7 is a dimerization-activated GTPase of the GIMAP family that regulates autophagy, apoptosis, and cell survival through both intrinsic enzymatic activity and participation in heteromeric signaling complexes. Its GTP hydrolysis is stimulated by homodimerization via a trans-acting catalytic arginine mechanism, and GIMAP7 similarly activates the GTPase activity of GIMAP2 through heterodimerization; it also forms a ternary complex with GIMAP6 and GABARAPL2 to regulate autophagy-related GTPase function (PMID:23454188, PMID:35551368). GIMAP7 localizes to lipid droplets and membranous organelles including the Golgi apparatus, endoplasmic reticulum, and lysosomes, and directly binds LC3B to convert incomplete autophagy to complete autophagy flux, promoting apoptosis during respiratory syncytial virus infection (PMID:23454188, PMID:40728050). In disease-relevant contexts, GIMAP7 inhibits the SHH/Smo signaling axis to promote apoptosis and oxidative stress in ovarian granulosa cells and to suppress epithelial–mesenchymal transition and glycolysis in lung adenocarcinoma (PMID:36581994, PMID:38151913).

Mechanistic history

Synthesis pass · year-by-year structured walk · 5 steps
  1. 2013 High

    Determining how GIMAP family GTPases are activated: crystal structure and mutagenesis revealed that GIMAP7 homodimerization through G domains positions a catalytic arginine in trans to stimulate GTP hydrolysis, and that this same mechanism operates in GIMAP7–GIMAP2 heterodimers on lipid droplets.

    Evidence Crystal structure of GTP-bound GIMAP7 homodimer; in vitro GTPase assays; active-site mutagenesis; subcellular fractionation showing lipid droplet localization

    PMID:23454188

    Open questions at the time
    • Physiological triggers that control dimerization in vivo are unknown
    • Downstream effectors of GIMAP7 GTP hydrolysis have not been identified
    • Whether GIMAP7 GTPase activity is required for its roles in autophagy or apoptosis is untested
  2. 2022 Medium

    Extending GIMAP7 from a homodimer/binary heterodimer context to a ternary complex: GIMAP7 was shown to associate with GIMAP6 and GABARAPL2, linking its GTPase regulatory capacity to autophagy and immune cell homeostasis.

    Evidence Co-immunoprecipitation and biochemical complex analysis in the context of a Gimap6-knockout mouse model

    PMID:35551368

    Open questions at the time
    • Stoichiometry and structure of the GIMAP6–GABARAPL2–GIMAP7 complex remain unresolved
    • Whether GIMAP7 activates GIMAP6 GTPase activity through the same trans-arginine mechanism is untested
    • GIMAP7-specific functional consequences within this complex are not separated from GIMAP6 loss
  3. 2022 Medium

    Establishing a cell-biological role for GIMAP7 beyond GTPase biochemistry: GIMAP7 promotes oxidative stress and apoptosis in ovarian granulosa cells by suppressing the SHH/SMO/Gli1 signaling pathway, with cyclopamine rescue confirming pathway specificity.

    Evidence siRNA knockdown in KGN granulosa cells; PCOS rat model; oxidative stress assays; pharmacological rescue with SHH inhibitor cyclopamine

    PMID:36581994

    Open questions at the time
    • Mechanism by which GIMAP7 inhibits SHH pathway activation is not defined
    • Whether GTPase activity is required for SHH pathway suppression is unknown
    • Findings from a single lab and cell line
  4. 2023 Medium

    Broadening the anti-tumorigenic role of GIMAP7: overexpression suppressed EMT and glycolysis in lung adenocarcinoma through the Smo/AMPK axis, confirmed by agonist rescue experiments and xenograft tumor suppression.

    Evidence Overexpression and siRNA knockdown in lung adenocarcinoma cells; ECAR/OCR metabolic assays; xenograft nude mouse model; rescue with Smo agonist SAG and AMPK agonist GSK621

    PMID:38151913

    Open questions at the time
    • Direct physical interaction between GIMAP7 and Smo or AMPK has not been demonstrated
    • Relationship between GIMAP7 GTPase activity and Smo/AMPK suppression is unexplored
    • Single-lab study without independent replication
  5. 2025 Medium

    Revealing a direct role for GIMAP7 in autophagy: GIMAP7 binds LC3B and converts RSV-induced incomplete autophagy to complete autophagic flux, thereby promoting apoptosis and restricting viral replication, while localizing to Golgi, ER, and lysosomes.

    Evidence Co-immunoprecipitation of GIMAP7–LC3B interaction; autophagy flux assays; subcellular localization analysis in overexpression system

    PMID:40728050

    Open questions at the time
    • LC3B-binding interface on GIMAP7 (e.g., LIR motif) has not been mapped
    • Whether GTPase activity or nucleotide state regulates LC3B binding is unknown
    • Reciprocal validation of the GIMAP7–LC3B interaction (e.g., endogenous co-IP or structural data) is lacking

Open questions

Synthesis pass · forward-looking unresolved questions
  • It remains unknown how GIMAP7 GTPase activity is mechanistically coupled to its downstream functions in autophagy, SHH/Smo pathway suppression, and apoptosis, and whether nucleotide cycling controls its localization or interaction partner selectivity.
  • No structural data on GIMAP7 heterodimeric complexes (with GIMAP6 or within the ternary complex)
  • The mechanism connecting GTPase activity to SHH/Smo inhibition is entirely undefined
  • Whether GIMAP7 functions as a tumor suppressor through a unified or context-dependent mechanism is unresolved

Mechanism profile

Synthesis pass · controlled-vocabulary classification · explore literature graph →
Molecular activity
GO:0098772 molecular function regulator activity 2 GO:0003924 GTPase activity 1
Localization
GO:0005764 lysosome 1 GO:0005783 endoplasmic reticulum 1 GO:0005794 Golgi apparatus 1 GO:0005811 lipid droplet 1
Pathway
R-HSA-162582 Signal Transduction 2 R-HSA-5357801 Programmed Cell Death 2 R-HSA-9612973 Autophagy 2
Complex memberships
GIMAP6–GABARAPL2–GIMAP7 complex

Evidence

Reading pass · 7 per-paper findings extracted from the source corpus
Year Finding Method Journal Conf PMIDs
2013 GIMAP7 undergoes dimerization-stimulated GTP hydrolysis via a homodimer assembled through G domains, with a catalytic arginine supplied in trans from one monomer to stimulate GTP hydrolysis in the opposing monomer. GIMAP7 also stimulates GTP hydrolysis by GIMAP2 via an analogous trans-arginine mechanism, establishing that GTPase activity in the GIMAP family is controlled by homo- and heterodimerization. Crystal structure of GTP-bound GIMAP7 homodimer; in vitro GTPase activity assays; active-site mutagenesis; co-localization/interaction studies on lipid droplets Structure High 23454188
2013 GIMAP7 was identified on lipid droplets (along with GIMAP2), establishing lipid droplets as a subcellular localization relevant to its GTPase function and interaction with GIMAP2. Subcellular fractionation and co-localization screening for GIMAP family members on lipid droplets Structure High 23454188
2022 GIMAP6 forms a complex with GABARAPL2 and GIMAP7 to regulate GTPase activity, placing GIMAP7 as a component of a heterocomplex that controls GIMAP6 GTPase function relevant to autophagy and immune regulation. Co-immunoprecipitation; Gimap6-/- mouse model; biochemical complex analysis The Journal of experimental medicine Medium 35551368
2022 GIMAP7 promotes oxidative stress and apoptosis in ovarian granulosa cells in PCOS by inhibiting the sonic hedgehog (SHH) signalling pathway; GIMAP7 silencing increased SHH, SMO, and Gli1 expression, reduced ROS and MDA, and increased GSH/SOD levels, and pharmacological inhibition of SHH (cyclopamine) reversed the effects of GIMAP7 silencing. siRNA knockdown in KGN cells; PCOS rat model; CCK-8, flow cytometry, oxidative stress assays; rescue experiment with SHH pathway inhibitor cyclopamine; Western blot and qRT-PCR Journal of ovarian research Medium 36581994
2023 GIMAP7 inhibits epithelial-mesenchymal transition (EMT) and glycolysis in lung adenocarcinoma cells by suppressing the Smo/AMPK signalling pathway; rescue with Smo agonist SAG or AMPK agonist GSK621 reversed the anti-tumour effects of GIMAP7, and GIMAP7 overexpression suppressed tumour growth in a xenograft model. Plasmid overexpression and siRNA knockdown; CCK-8, EdU, colony formation, wound healing, transwell, flow cytometry; ECAR/OCR measurement; Western blot; xenograft nude mouse model; rescue experiments with Smo/AMPK agonists Thoracic cancer Medium 38151913
2025 GIMAP7 directly interacts with LC3B and converts RSV-induced incomplete autophagy flux to complete autophagy, thereby triggering apoptosis and reducing RSV replication. GIMAP7 localizes to membranous organelles including the Golgi apparatus, endoplasmic reticulum, and lysosomes. Co-immunoprecipitation (GIMAP7–LC3B interaction); Western blot; RT-qPCR; overexpression studies; autophagy flux assays; subcellular localization analysis Journal of medical virology Medium 40728050
2023 Nasal anti-CD3 monoclonal antibody (Foralumab) treatment increased GIMAP7 gene expression in T cells and was associated with downregulation of Rho/ROCK1, a downstream pathway of GTPase signalling, suggesting GIMAP7 upregulation modulates GTPase-dependent inflammatory signalling in T cells. RNA-sequencing of T cells from randomized clinical trial subjects; pathway analysis linking GIMAP7 upregulation to Rho/ROCK1 downregulation Proceedings of the National Academy of Sciences of the United States of America Low 36881624

Source papers

Stage 0 corpus · 19 papers · ranked by NIH iCite citations
Year Title Journal Citations PMID
2019 Genome-Wide Association Transethnic Meta-Analyses Identifies Novel Associations Regulating Coagulation Factor VIII and von Willebrand Factor Plasma Levels. Circulation 133 30586737
2015 Extensive variation between tissues in allele specific expression in an outbred mammal. BMC genomics 70 26596891
2015 Transcriptomic and proteomic analyses of splenic immune mechanisms of rainbow trout (Oncorhynchus mykiss) infected by Aeromonas salmonicida subsp. salmonicida. Journal of proteomics 65 25849251
2013 Structural insights into the mechanism of GTPase activation in the GIMAP family. Structure (London, England : 1993) 39 23454188
2019 The relevance between the immune response-related gene module and clinical traits in head and neck squamous cell carcinoma. Cancer management and research 36 31496804
2023 PCSK9 facilitates melanoma pathogenesis via a network regulating tumor immunity. Journal of experimental & clinical cancer research : CR 32 36588164
2023 Nasal administration of anti-CD3 mAb (Foralumab) downregulates NKG7 and increases TGFB1 and GIMAP7 expression in T cells in subjects with COVID-19. Proceedings of the National Academy of Sciences of the United States of America 18 36881624
2020 Transcriptomic study in women with trisomy 21 identifies a possible role of the GTPases of the immunity-associated proteins (GIMAP) in the protection of breast cancer. Scientific reports 16 32523132
2022 GIMAP6 regulates autophagy, immune competence, and inflammation in mice and humans. The Journal of experimental medicine 14 35551368
2022 GIMAP7 induces oxidative stress and apoptosis of ovarian granulosa cells in polycystic ovary syndrome by inhibiting sonic hedgehog signalling pathway. Journal of ovarian research 13 36581994
2019 Identification of GIMAP7 and Rabl3 as Putative Biomarkers for Oral Squamous Cell Carcinoma Through Comparative Proteomic Approach. Pathology oncology research : POR 9 31748878
2021 Gene Banks as Reservoirs to Detect Recent Selection: The Example of the Asturiana de los Valles Bovine Breed. Frontiers in genetics 8 33633776
2025 Identification of potential biomarkers associated with cuproptosis and immune microenvironment analysis in acute myocardial infarction: A diagnostic accuracy study. Medicine 5 39889200
2023 GIMAP7 inhibits epithelial-mesenchymal transition and glycolysis in lung adenocarcinoma cells via regulating the Smo/AMPK signaling pathway. Thoracic cancer 4 38151913
2025 Proteomic and phosphoproteomic profilings reveal distinct cellular responses during Tilapinevirus tilapiae entry and replication. PeerJ 3 39995988
2025 Uncovering Hippo pathway-related biomarkers in acute myocardial infarction via scRNA-seq binding transcriptomics. Scientific reports 3 40133574
2020 Analysis of T lymphocyte-related biomarkers in pancreatic cancer. Pancreatology : official journal of the International Association of Pancreatology (IAP) ... [et al.] 3 32952042
2026 Mechanistic investigation into the differences in growth performance and resistance to spring viremia of carp virus in common carp. Frontiers in immunology 0 41694347
2025 Autophagy-to-Apoptosis Conversion Mediated by GIMAP7 Exhibit Anti-RSV Action. Journal of medical virology 0 40728050