| 1993 |
GCN1 is required in vivo for phosphorylation of eIF2α by GCN2 in amino acid-starved yeast cells, but is not required for intrinsic GCN2 kinase activity (cell extracts from gcn1Δ strains had wild-type GCN2 kinase activity). GCN1 encodes a 297 kDa protein with an 88 kDa region similar to translation elongation factor 3 (EF3). |
Genetic deletion (gcn1Δ), in vitro kinase assay from cell extracts, sequence homology analysis |
Molecular and cellular biology |
High |
8497269
|
| 1995 |
GCN1 and GCN20 physically interact and form a protein complex required to activate GCN2 kinase function; GCN20 co-immunoprecipitates with GCN1 from cell extracts and the two proteins interact in the yeast two-hybrid system. |
Co-immunoprecipitation, yeast two-hybrid, genetic deletion analysis |
The EMBO journal |
High |
7621831
|
| 1997 |
GCN1 and GCN20 co-sediment with polysomes and 80S ribosomes; ribosome association of GCN20 is largely dependent on GCN1. GCN1 localizes to the cytoplasm with no association with plasma or vacuolar membranes. The N-terminal 15–25% of GCN20 (not the ABC domains) is required for regulatory function and interacts with an internal EF3-like segment of GCN1. ABC domains of GCN20 are dispensable for GCN1 complex formation and GCN2 stimulation. |
Polysome sedimentation/fractionation, indirect immunofluorescence, deletion/truncation analysis, co-immunoprecipitation |
Molecular and cellular biology |
High |
9234705
|
| 1990 |
Genetic epistasis places GCN1 and GCN2 upstream of GCN3 in the general amino acid control pathway: constitutively active gcn3c alleles derepress GCN4 in the absence of GCN1 and GCN2, while constitutively derepressing GCN2 alleles require GCN3 for their phenotype. |
Genetic epistasis analysis (double mutants, suppressor alleles) |
Genetics |
High |
2249755
|
| 2000 |
The GCN1–GCN20 complex physically interacts with GCN2 via the N-terminus of GCN2; this interaction is required for GCN2 activation by uncharged tRNA. Overexpression of N-terminal GCN2 segments competitively displaced GCN1 from native GCN2. The requirement for GCN1 was reduced by overexpressing tRNA(His), linking GCN1 function to uncharged tRNA sensing. |
Co-immunoprecipitation, dominant-negative overexpression, genetic suppression, tRNA overexpression |
The EMBO journal |
High |
10775272
|
| 2000 |
A C-terminal segment of GCN1 (residues 2052–2428) is necessary and sufficient for binding GCN2 in vivo and in vitro; Arg2259 in this segment is essential for GCN2 binding and GCN1 regulatory function. Separate ribosome-binding and GCN2-binding domains of GCN1 are both required for GCN2 activation in amino acid-starved cells. |
In vitro binding assay, in vivo co-immunoprecipitation, site-directed mutagenesis (R2259A), dominant-negative overexpression, paromomycin sensitivity assay |
The EMBO journal |
High |
11101534
|
| 2000 |
GCN2 interacts with GCN1 via a GI (GCN2 and IMPACT) domain at the N-terminus of GCN2; mutations in conserved residues of the GI domain abolish GCN1 binding and abrogate the general amino acid control response. |
Yeast two-hybrid, deletion/mutagenesis analysis, functional growth assays |
The Journal of biological chemistry |
Medium |
10801780
|
| 2001 |
A C-terminal segment of GCN1 is sufficient to bind the GI domain of GCN2; the gcn1-F2291L mutation abolishes GCN1–GCN2 interaction and impairs eIF2α phosphorylation, demonstrating that GCN1–GCN2 physical interaction is required for GCN2 kinase activation in vivo. |
Dual bait two-hybrid, site-directed mutagenesis, eIF2α phosphorylation assay in vivo |
The Journal of biological chemistry |
Medium |
11350982
|
| 2005 |
Ribosome (polyribosome) binding by GCN1 is required for full activation of GCN2. Point mutations in two conserved, non-contiguous segments of GCN1 reduced polyribosome association without affecting GCN1 expression or GCN20 interaction, and decreased eIF2α phosphorylation. The EF3-like domain of GCN1 has an effector function in GCN2 activation beyond ribosome binding. |
Polysome sedimentation, site-directed mutagenesis, eIF2α phosphorylation assay, co-immunoprecipitation |
The Journal of biological chemistry |
High |
15722345
|
| 2005 |
Mouse IMPACT protein binds to the C-terminal GCN1 segment (RWDBD) required for GCN2 interaction, competes with GCN2 for GCN1 binding, and inhibits eIF2α phosphorylation by GCN2 under leucine starvation. IMPACT is the functional mammalian counterpart of yeast Yih1. |
Co-immunoprecipitation (IMPACT with native mouse GCN1), in vivo overexpression in yeast and mouse embryonic fibroblasts, eIF2α phosphorylation assay, ATF4/CHOP reporter readout |
The Journal of biological chemistry |
High |
15937339
|
| 2009 |
Gir2 (a GI-domain-containing protein) interacts with GCN1 through its GI domain and co-fractionates with polyribosomes in a partially GCN1-dependent manner; Rbg2 and Gir2 associate with ribosomes. |
Yeast two-hybrid, polysome fractionation, overexpression growth assays |
Eukaryotic cell |
Medium |
19448108
|
| 2011 |
Yih1 binds GCN1 via its RWD domain (residues 1–132); residues Asp-102 and Glu-106 in helix 3 of the RWD are essential for GCN1 binding and GCN2 inhibition but dispensable for actin binding. Yih1–actin binding is independent of GCN1 and requires residues 68–258. Yih1 competes with GCN2 for GCN1 binding to inhibit GCN2. |
Co-immunoprecipitation, site-directed mutagenesis, deletion analysis, in vitro binding assays, GCN2 inhibition functional assays |
The Journal of biological chemistry |
High |
21239490
|
| 2013 |
Mammalian IMPACT prevents GCN1 association with GCN2 and promotes dissolution of the GCN2–GCN1 complex, thereby inhibiting GCN2 activation under amino acid starvation, proteasome inhibition, UV irradiation, and glucose starvation in mammalian cells. IMPACT overexpression in yeast phenocopies YIH1 overexpression under all GCN1/GCN2-dependent stress conditions. |
Co-immunoprecipitation (GCN2–GCN1 complex), eIF2α phosphorylation assay, overexpression in yeast and mammalian cells, growth assays under multiple stress conditions |
Biochemical and biophysical research communications |
Medium |
24333428
|
| 2014 |
C. elegans GCN-1 and ABCF-3 physically interact in vivo and are required for the basal level of eIF2α phosphorylation; they promote apoptosis of somatic and irradiated germ cells. Yeast homologs of GCN-1 and ABCF-3 (GCN1 and GCN20) can substitute for the worm proteins in promoting somatic cell deaths, indicating functional conservation. |
Co-immunoprecipitation (in vivo), genetic deletion, eIF2α phosphorylation assay, cross-species complementation |
PLoS genetics |
Medium |
25101958
|
| 2015 |
GCN1 directly contacts the small ribosomal protein Rps10 (S10) via residues 1060–1777; this interaction is RNA-independent (in vitro co-precipitation). Deletion of rps10A or rps10B reduces eIF2α phosphorylation under starvation, consistent with impaired GCN1-mediated GCN2 activation. |
Yeast two-hybrid, in vitro co-precipitation, deletion strains with eIF2α phosphorylation assay, genetic interaction (eEF3 overexpression) |
The Biochemical journal |
Medium |
25437641
|
| 2020 |
In mice, GCN1 is essential for embryonic development (GCN1 KO dies mid-embryogenesis). The RWDBD (C-terminal GCN2-binding domain) of GCN1 is required for amino acid starvation- and UV-induced eIF2α phosphorylation in mouse embryonic fibroblasts. GCN1ΔRWDBD MEFs show reduced cell proliferation and G2/M arrest with decreased Cdk1 and Cyclin B1, indicating a GCN2-independent role in cell cycle regulation. |
Knockout and RWDBD-deletion mouse lines, eIF2α phosphorylation assay in MEFs, cell cycle analysis (flow cytometry), Western blotting for Cdk1/Cyclin B1 |
PLoS genetics |
High |
32324833
|
| 2021 |
Cryo-EM structure of yeast GCN1 in complex with stalled and colliding 80S ribosomes (disome): GCN1 HEAT repeats span from the P-stalk region of the colliding ribosome to the P-stalk and A-site region of the lead ribosome. The lead ribosome is non-rotated with peptidyl-tRNA in the A-site, uncharged tRNA in the P-site, eIF5A in E-site, and Rbg2/Gir2 at the A-site factor binding region. The colliding ribosome is rotated with peptidyl-tRNA in hybrid A/P-site and Mbf1 bound on the 40S. |
Cryo-electron microscopy (cryo-EM) structure determination |
Proceedings of the National Academy of Sciences of the United States of America |
High |
33790014
|
| 2021 |
GCN1 and GCN20 suppress frameshifting at collided ribosomes (at CGA codon repeats) in yeast; deletion of GCN1 or GCN20 increases frameshifting, and this effect is not primarily mediated through ISR activation. Mbf1 requires either Hel2 or GCN1 to suppress frameshifting with wild-type eEF3. |
Genetic selection for frameshifting mutants, frameshifting reporter assays, genetic epistasis (double mutants with mbf1, hel2) |
RNA (New York, N.Y.) |
Medium |
34916334
|
| 2022 |
MIRO2 (mitochondrial Rho GTPase 2) interacts with GCN1 in prostate cancer cells; MIRO2 is required for efficient GCN1-mediated GCN2 kinase signaling and ATF4 induction. A prostate-cancer-associated MIRO2 mutation (159L) increases GCN1 binding. |
Co-immunoprecipitation, protein network analysis, siRNA knockdown, ATF4/GCN2 phosphorylation assays, prostate cancer xenograft model |
Molecular cancer research : MCR |
Medium |
34992146
|
| 2022 |
Specific amino acid residues R2289, R2297, and K2301 in the GCN1 RWDBD (in addition to the previously known R2259) are required for GCN2 binding; two helices in GCN1 constitute a GCN2-binding site. |
Dominant-negative overexpression system, site-directed mutagenesis, eIF2α phosphorylation assay |
PloS one |
Medium |
36441697
|
| 2023 |
GCN1 acts as a ribosome collision sensor that engages E3 ligase RNF14; this GCN1–RNF14 interaction is essential for ubiquitination and degradation of eEF1A on stalled ribosomes with an occluded A-site (induced by ternatin-4). GCN1 is required for RNF14/RNF25-dependent ubiquitination of eEF1A and ribosomal protein RPS27A/eS31. |
Chemical-genetic approach (ternatin-4), quantitative proteomics (ubiquitin site mapping), CRISPR knockouts of GCN1/RNF14/RNF25, co-immunoprecipitation |
Cell |
High |
36638793
|
| 2023 |
GCN1 acts as a ribosome collision sensor that initiates cotranslational mRNA decay via CCR4/NOT to limit accumulation of readthrough proteins. GCN1 also regulates translation dynamics at non-optimal codons enriched in 3' UTRs, transmembrane proteins, and collagens (revealed by selective ribosome profiling). GCN1 dysfunction during aging increasingly perturbs these protein classes. |
Selective ribosome profiling, GCN1 knockdown/knockout in C. elegans and mammalian cells, proteomics, mRNA decay assays |
Cell |
High |
37339632
|
| 2024 |
Xrn1 co-precipitates with GCN1 and GCN2, suggesting a trimeric complex; deletion of XRN1 reduces eIF2α phosphorylation under starvation and impairs growth under starvation conditions. Constitutively active GCN2-induced eIF2α hyperphosphorylation is independent of Xrn1, arguing against Xrn1 role in eIF2α dephosphorylation. |
Co-immunoprecipitation (Xrn1 with GCN1/GCN2), deletion strains, eIF2α phosphorylation assay, growth assays |
The Biochemical journal |
Low |
38440860
|
| 2024 |
MTHFR (methylenetetrahydrofolate reductase) co-purifies with GCN1 in affinity purification coupled mass spectrometry from 293T cells, and the interaction was confirmed by immunoprecipitation-immunoblotting. |
Affinity purification–mass spectrometry, co-immunoprecipitation–immunoblotting |
Biochimie |
Low |
39571719
|
| 2025 |
In vitro translation reconstitution demonstrated that GCN2 activation by amino acid stress requires GCN1 as a di-ribosome (collision) sensor; GCN1 recruits GCN2 to ribosomes in a collision-dependent manner, where GCN2 is activated by key ribosomal interactions and stably associated with collided ribosomes. |
In vitro translation reconstitution, biochemical fractionation of collided ribosome populations, quantitative proteomics |
Science (New York, N.Y.) |
High |
41037622
|
| 2025 |
In Neurospora crassa, the circadian clock regulates GCN1 and CPC-3 (GCN2 ortholog) association with ribosomes in a rhythmic manner; these interactions are required for clock-regulated CPC-3 activity. GCN1 interaction with uncharged tRNA (modulated by GCN20) is controlled by the clock and drives rhythmic CPC-3 activation. |
Ribosome fractionation/sedimentation, temperature-sensitive tRNA synthetase mutant (un-3), genetic deletion of GCN20, eIF2α phosphorylation assay at different circadian times |
Proceedings of the National Academy of Sciences of the United States of America |
Medium |
39903114
|
| 2025 |
RAB25 interacts with GCN1 in hepatocytes (confirmed by mass spectrometry and co-immunoprecipitation); RAB25 binding to GCN1 inhibits K33-ubiquitination-mediated degradation of GCN1, thereby promoting GCN2 phosphorylation and ATF4-mediated ER stress in alcohol-associated liver disease. |
Mass spectrometry, co-immunoprecipitation, ubiquitination analysis, GCN1/GCN2 knockdown, in vitro and in vivo ALD models |
Clinical and molecular hepatology |
Medium |
40916695
|