Affinage

FASTK

Fas-activated serine/threonine kinase · UniProt Q14296

Length
549 aa
Mass
61.1 kDa
Annotated
2026-04-28
100 papers in source corpus 5 papers cited in narrative 5 extracted findings

Mechanistic narrative

Synthesis pass · prose summary of the discoveries below

FASTK is a multifunctional signaling kinase and RNA-processing regulator that operates across mitochondrial, cytoplasmic, and nuclear compartments. Upon Fas receptor ligation, FASTK is dephosphorylated and activated, whereupon it phosphorylates the RNA-binding protein TIA-1 upstream of apoptotic DNA fragmentation (PMID:7544399). Under basal conditions FASTK localizes to the outer mitochondrial membrane, but upon stress it translocates to cytoplasmic stress granules to modulate translational silencing via TIA-1 interaction, and also resides in nuclear speckles where it promotes FGFR2 exon IIIb inclusion through a U-rich intronic element independently of TIA-1 (PMID:17592127). As the founding member of the FASTK family, it shares a RAP domain architecture that enables RNA binding and participates in post-transcriptional regulation of mitochondrial gene expression, with family members collectively governing non-canonical RNA junction processing, ribosome assembly, and mitochondrial translation (PMID:29036396, PMID:34748562).

Mechanistic history

Synthesis pass · year-by-year structured walk · 5 steps
  1. 1995 High

    The identification of FASTK as a Fas-activated kinase that phosphorylates TIA-1 established the first direct biochemical link between Fas death-receptor signaling and a downstream kinase–substrate pair operating upstream of DNA fragmentation.

    Evidence In vitro kinase assays and immunoprecipitation in Fas-ligated Jurkat cells

    PMID:7544399

    Open questions at the time
    • The structural basis of FASTK kinase activity and its activation by dephosphorylation remains undefined
    • Whether TIA-1 phosphorylation is necessary and sufficient for downstream DNA fragmentation was not tested
    • The kinase(s) and phosphatase(s) that regulate FASTK phosphorylation status are unknown
  2. 2007 High

    Demonstration that FASTK resides on the outer mitochondrial membrane yet dynamically relocates to stress granules and nuclear speckles revealed it as a tri-compartmental protein with separable functions in translational silencing (via TIA-1) and alternative splicing (TIA-1-independent promotion of FGFR2 exon IIIb inclusion).

    Evidence Two-hybrid screens, co-immunoprecipitation, siRNA knockdown, minigene splicing assays, and immunofluorescence in mammalian cells

    PMID:17592127

    Open questions at the time
    • The signals triggering FASTK redistribution among the three compartments are not characterized
    • The mechanism by which FASTK recognizes the IAS1 U-rich element to promote exon inclusion is unresolved
    • Whether the kinase activity of FASTK is required for its splicing or stress-granule functions was not determined
  3. 2013 Medium

    Validation of FASTK as a direct miR-106a-5p target whose depletion suppresses proliferation and migration while promoting apoptosis in astrocytoma cells placed FASTK in a pro-survival, pro-proliferative role in a cancer context.

    Evidence Luciferase reporter assay for direct miRNA targeting, siRNA knockdown with proliferation, migration, and apoptosis assays in astrocytoma cells

    PMID:24013584

    Open questions at the time
    • The downstream effectors through which FASTK promotes proliferation and migration were not identified
    • Findings are from a single cancer cell type without in vivo validation
    • Whether the kinase activity or RNA-regulatory functions of FASTK mediate these phenotypes is unknown
  4. 2017 Medium

    A systematic review consolidated evidence that the FASTK family shares a RAP domain enabling RNA binding and collectively governs mitochondrial mRNA processing, ribosome assembly, and translation, reframing FASTK as the founding member of a mitochondrial RNA-regulatory family.

    Evidence Review synthesizing biochemical, genetic, and cell-biology studies across FASTK family members

    PMID:29036396

    Open questions at the time
    • The specific mitochondrial RNA targets of FASTK itself (as opposed to its paralogs) were not delineated
    • No structural data for any FASTK-family RAP domain were available
    • Whether FASTK and its paralogs function redundantly or in a coordinated manner was not resolved
  5. 2021 High

    CRISPR knockouts demonstrated that FASTK family members, especially FASTKD4 and FASTKD5, are required for non-canonical RNA junction processing of the mitochondrial transcriptome, with FASTKD5 loss causing severe translation and oxidative phosphorylation defects, providing direct genetic evidence for the family's essential role in mitochondrial gene expression.

    Evidence Single and combinatorial CRISPR/Cas9 knockouts in human cell lines with mitochondrial transcriptome sequencing, translation assays, and respiration measurements

    PMID:34748562

    Open questions at the time
    • The specific contribution of FASTK itself (versus FASTKD4/D5) to junction processing was not isolated
    • The mechanism by which individual family members recognize their target RNA junctions is unknown
    • In vivo physiological consequences of FASTK family loss in animal models have not been reported

Open questions

Synthesis pass · forward-looking unresolved questions
  • A key unresolved question is how the kinase activity, RNA-regulatory functions, and dynamic subcellular redistribution of FASTK are coordinated, and which specific mitochondrial RNA targets FASTK itself processes independently of its paralogs.
  • No structural model of full-length FASTK or its RAP domain exists
  • The relationship between FASTK kinase activity and its RNA-regulatory roles has never been tested
  • Specific mitochondrial transcript targets of FASTK (not paralogs) remain to be defined by loss-of-function approaches

Mechanism profile

Synthesis pass · controlled-vocabulary classification · explore literature graph →
Molecular activity
GO:0003723 RNA binding 2 GO:0140096 catalytic activity, acting on a protein 1
Localization
GO:0005739 mitochondrion 3 GO:0005634 nucleus 1 GO:0005829 cytosol 1
Pathway
R-HSA-5357801 Programmed Cell Death 2 R-HSA-8953854 Metabolism of RNA 2 R-HSA-74160 Gene expression (Transcription) 1
Partners

Evidence

Reading pass · 5 per-paper findings extracted from the source corpus
Year Finding Method Journal Conf PMIDs
1995 FASTK (Fas-activated serine/threonine kinase) is rapidly dephosphorylated and activated upon Fas ligation, and the activated kinase phosphorylates TIA-1, a nuclear RNA-binding protein implicated as an effector of apoptosis; phosphorylation of TIA-1 precedes DNA fragmentation, placing FASTK upstream of apoptotic DNA fragmentation. In vitro kinase assay, immunoprecipitation, phosphorylation studies in Fas-ligated Jurkat cells The Journal of experimental medicine High 7544399
2007 FASTK localizes to the outer mitochondrial membrane under normal conditions and translocates to stress granules upon environmental stress, where it interacts with TIA-1 to modulate stress-induced translational silencing; FASTK is also found in the nucleus at nuclear speckles and promotes inclusion of exon IIIb of FGFR2 mRNA by acting on a U-rich intronic sequence (IAS1) independently of TIA-1. Two-hybrid interaction screens, biochemical co-immunoprecipitation, siRNA knockdown, minigene splicing assays, subcellular fractionation and immunofluorescence localization Proceedings of the National Academy of Sciences of the United States of America High 17592127
2017 FASTK family proteins (FASTK and FASTKD1-5) are post-transcriptional regulators of mitochondrial gene expression; each member has distinct roles in mRNA processing and maturation, ribosome assembly, and translation within mitochondria, consistent with their shared RAP domain architecture enabling RNA binding. Review synthesizing biochemical, genetic, and cell-biology studies of the FASTK family Nucleic acids research Medium 29036396
2021 FASTK family members, particularly FASTKD4 and FASTKD5, are required for non-canonical RNA junction processing of the human mitochondrial transcriptome; loss of FASTKD5 causes severe defects in mitochondrial translation of electron transport chain components and oxidative phosphorylation, and combined knockouts increase specific antisense transcripts. CRISPR/Cas9 knockout of single and combined FASTK family members in human cell lines, comprehensive mitochondrial transcriptome sequencing, mitochondrial translation assays, oxidative phosphorylation measurements PLoS genetics High 34748562
2013 FASTK is a direct target of miR-106a-5p in astrocytoma cells; knockdown of FASTK inhibits cell proliferation and migration and promotes apoptosis, phenocopying miR-106a-5p overexpression, establishing FASTK as a downstream effector mediating these cellular effects. Luciferase reporter assay confirming direct miRNA targeting, western blot, siRNA knockdown with proliferation/migration/apoptosis assays PloS one Medium 24013584

Source papers

Stage 0 corpus · 100 papers · ranked by NIH iCite citations
Year Title Journal Citations PMID
2014 Fast and sensitive protein alignment using DIAMOND. Nature methods 8993 25402007
2017 Salmon provides fast and bias-aware quantification of transcript expression. Nature methods 8430 28263959
2016 Mash: fast genome and metagenome distance estimation using MinHash. Genome biology 2269 27323842
2011 PHAST: a fast phage search tool. Nucleic acids research 1708 21672955
1995 Mitomycin C: small, fast and deadly (but very selective). Chemistry & biology 430 9383461
2016 A fast pathway for fear in human amygdala. Nature neuroscience 236 27294508
2017 A spatially localized architecture for fast and modular DNA computing. Nature nanotechnology 234 28737747
2012 rsEGFP2 enables fast RESOLFT nanoscopy of living cells. eLife 165 23330067
2003 How fast is protein hydrophobic collapse? Proceedings of the National Academy of Sciences of the United States of America 159 14530404
1995 Fas-activated serine/threonine kinase (FAST) phosphorylates TIA-1 during Fas-mediated apoptosis. The Journal of experimental medicine 153 7544399
2020 Very fast CRISPR on demand. Science (New York, N.Y.) 150 32527834
2020 GenMap: ultra-fast computation of genome mappability. Bioinformatics (Oxford, England) 147 32246826
2018 Molecular Mechanisms of Fast Neurotransmitter Release. Annual review of biophysics 144 29792815
2017 P2X4: A fast and sensitive purinergic receptor. Biomedical journal 135 29179879
1999 The fast protein folding problem. Annual review of physical chemistry 135 15012420
2017 Fast and ultrafast endocytosis. Current opinion in cell biology 134 28391090
1993 ATP--a fast neurotransmitter. FEBS letters 134 7685715
1992 Sepsis-induced changes in protein synthesis: differential effects on fast- and slow-twitch muscles. The American journal of physiology 125 1377447
2004 Monoliths for fast bioseparation and bioconversion and their applications in biotechnology. Journal of separation science 109 15354554
2002 Intranuclear ataxin1 inclusions contain both fast- and slow-exchanging components. Nature cell biology 103 12360291
2010 Flexible Accelerated STOP Tetracycline Operator-knockin (FAST): a versatile and efficient new gene modulating system. Biological psychiatry 91 20163789
2003 Tuning exocytosis for speed: fast and slow modes. Biochimica et biophysica acta 90 12914956
2018 Fast-Forwarding Genetic Gain. Trends in plant science 89 29426713
2001 Mechanism of fast protein folding. Annual review of biochemistry 89 12045111
2021 DamageProfiler: fast damage pattern calculation for ancient DNA. Bioinformatics (Oxford, England) 84 33890614
2001 The transcriptional role of Smads and FAST (FoxH1) in TGFbeta and activin signalling. Molecular and cellular endocrinology 78 11451566
1996 Fast events in protein folding. Structure (London, England : 1993) 77 8939749
2019 Evolution of fast root gravitropism in seed plants. Nature communications 76 31375675
2017 Acid-Fast Positive and Acid-Fast Negative Mycobacterium tuberculosis: The Koch Paradox. Microbiology spectrum 76 28337966
2006 alphaCaMKII autophosphorylation: a fast track to memory. Trends in neurosciences 74 16806507
2017 The FASTK family of proteins: emerging regulators of mitochondrial RNA biology. Nucleic acids research 73 29036396
1975 Determinants of fast- and slow-pathway conduction in patients with dual atrioventricular nodal pathways. Circulation research 70 1132071
2014 Evolutionary genomics of fast evolving tunicates. Genome biology and evolution 63 25008364
2013 miR-106a-5p inhibits the proliferation and migration of astrocytoma cells and promotes apoptosis by targeting FASTK. PloS one 62 24013584
2003 Integrins modulate fast excitatory transmission at hippocampal synapses. The Journal of biological chemistry 61 12524441
2015 A fast- and positively photoswitchable fluorescent protein for ultralow-laser-power RESOLFT nanoscopy. Nature methods 55 25894946
2004 Plant neocentromeres: fast, focused, and driven. Chromosome research : an international journal on the molecular, supramolecular and evolutionary aspects of chromosome biology 54 15289670
1999 A microplate assay for DNA damage determination (fast micromethod). Analytical biochemistry 54 10334836
2021 Bending to auxin: fast acid growth for tropisms. Trends in plant science 53 34848141
2019 Fusogenic Reoviruses and Their Fusion-Associated Small Transmembrane (FAST) Proteins. Annual review of virology 53 31283438
2010 Viroids: self-replicating, mobile, and fast-evolving noncoding regulatory RNAs. Wiley interdisciplinary reviews. RNA 48 21956936
2010 FtsK DNA translocase: the fast motor that knows where it's going. Chembiochem : a European journal of chemical biology 47 20922738
2020 A Fast and Clean BTK Inhibitor. Journal of medicinal chemistry 46 32401033
2020 Transcriptome analysis of grass carp (Ctenopharyngodon idella) between fast- and slow-growing fish. Comparative biochemistry and physiology. Part D, Genomics & proteomics 45 32454298
2008 Fast phylogenetic DNA barcoding. Philosophical transactions of the Royal Society of London. Series B, Biological sciences 45 18852104
2022 Fast Cysteine Bioconjugation Chemistry. Chemistry (Weinheim an der Bergstrasse, Germany) 44 35970770
2009 Fast track clinical pathway implications in esophagogastrectomy. World journal of gastroenterology 43 19152457
2023 Producing fast and active Rubisco in tobacco to enhance photosynthesis. The Plant cell 41 36471570
1988 Why can't a cell grow infinitely fast? Canadian journal of microbiology 41 2460206
2010 Fast calcium waves. Cell calcium 40 20883893
2022 Direct delivery and fast-treated Agrobacterium co-culture (Fast-TrACC) plant transformation methods for Nicotiana benthamiana. Nature protocols 39 36253612
2018 Fast digestive proteins and sarcopenia of aging. Current opinion in clinical nutrition and metabolic care 39 29028650
2010 Cetaceans on a molecular fast track to ultrasonic hearing. Current biology : CB 38 20933423
2021 Fast skeletal myosin-binding protein-C regulates fast skeletal muscle contraction. Proceedings of the National Academy of Sciences of the United States of America 37 33888578
2018 Fast-cycling Rho GTPases. Small GTPases 36 29157138
2011 Mechanism of microtubule-facilitated "fast track" nuclear import. The Journal of biological chemistry 36 21339293
2019 Analysis of the fecal microbiota of fast- and slow-growing rainbow trout (Oncorhynchus mykiss). BMC genomics 34 31664902
2007 Fas-activated serine/threonine phosphoprotein (FAST) is a regulator of alternative splicing. Proceedings of the National Academy of Sciences of the United States of America 34 17592127
2006 The photocurrent response of human cones is fast and monophasic. BMC neuroscience 34 16626487
2021 Cdk5 and GSK3β inhibit fast endophilin-mediated endocytosis. Nature communications 33 33893293
2011 Fast filtering for RNA homology search. Bioinformatics (Oxford, England) 33 21965818
2021 Epimutations Define a Fast-Ticking Molecular Clock in Plants. Trends in genetics : TIG 32 34016450
2021 The FASTK family proteins fine-tune mitochondrial RNA processing. PLoS genetics 32 34748562
2008 The SNAP-25 linker as an adaptation toward fast exocytosis. Molecular biology of the cell 32 18579690
2010 Fast prediction of RNA-RNA interaction. Algorithms for molecular biology : AMB 31 20047661
2017 Electric Fields and Fast Protein Dynamics in Enzymes. The journal of physical chemistry letters 30 29220191
2015 Differential microRNA Expression in Fast- and Slow-Twitch Skeletal Muscle of Piaractus mesopotamicus during Growth. PloS one 29 26529415
2021 Fast and strong amplifiers of natural selection. Nature communications 28 34188036
2015 FAST: FAST Analysis of Sequences Toolbox. Frontiers in genetics 28 26042145
2011 F2Dock: fast Fourier protein-protein docking. IEEE/ACM transactions on computational biology and bioinformatics 28 21071796
2020 The NIMH 'Fast-Fail Trials' (FAST) Initiative: Rationale, Promise, and Progress. Pharmaceutical medicine 27 32705569
2010 Shotguns and SNPs: how fast and cheap sequencing is revolutionizing plant biology. The Plant journal : for cell and molecular biology 27 20409267
1992 Biochemical comparison of fast- and slow-contracting squid muscle. The Journal of experimental biology 27 1640187
2021 Fast Antioxidant Reaction of Polyphenols and Their Metabolites. Antioxidants (Basel, Switzerland) 26 34439545
2018 Darwin Assembly: fast, efficient, multi-site bespoke mutagenesis. Nucleic acids research 26 29409059
2020 Downhill, Ultrafast and Fast Folding Proteins Revised. International journal of molecular sciences 25 33076540
2019 Green tides select for fast expanding Ulva strains. The Science of the total environment 25 31518784
2010 Fast repair of DNA radicals. Chemical Society reviews 25 20467694
2023 Accelerated MINFLUX Nanoscopy, through Spontaneously Fast-Blinking Fluorophores. Small (Weinheim an der Bergstrasse, Germany) 24 36642798
2010 Focused assessment with sonography in trauma (FAST): should its role be reconsidered? Postgraduate medical journal 24 20364030
2009 Parasynaptic signalling by fast neurotransmitters: the cerebellar cortex. Neuroscience 24 19358875
2013 Fast algorithms and heuristics for phylogenomics under ILS and hybridization. BMC bioinformatics 23 24564257
2012 Fast repair of protein radicals by urate. Free radical biology & medicine 23 22406318
2023 In the fast lane: Receptor trafficking during status epilepticus. Epilepsia open 22 36861477
2014 Developmental validation of the PowerPlex(®) ESI 16/17 Fast and PowerPlex(®) ESX 16/17 Fast Systems. Forensic science international. Genetics 22 25178681
2003 DNA integrity determination in marine invertebrates by Fast Micromethod. Aquatic toxicology (Amsterdam, Netherlands) 22 14568352
2021 The Fast and the Furious: Golgi Contact Sites. Contact (Thousand Oaks (Ventura County, Calif.)) 21 35071979
2019 How Fast Is Too Fast in Force-Probe Molecular Dynamics Simulations? The journal of physical chemistry. B 20 30970209
2012 Low activation and fast inactivation of transducin in carp cones. The Journal of biological chemistry 20 23045532
2009 Comparison of fast-food and non-fast-food children's menu items. Journal of nutrition education and behavior 20 19304259
2018 Distinct signal transductions in fast- and slow- twitch muscles upon denervation. Physiological reports 17 29464929
2024 InstaPrism: an R package for fast implementation of BayesPrism. Bioinformatics (Oxford, England) 16 38970377
2022 Human Immunodeficiency Virus Is Associated With Elevated FibroScan-Aspartate Aminotransferase (FAST) Score. Clinical infectious diseases : an official publication of the Infectious Diseases Society of America 16 35511608
2021 Neutrophils: fast and furious-the nucleotide pathway. Purinergic signalling 16 33913070
2018 Flexible and Fast Mapping of Peptides to a Proteome with ProteoMapper. Journal of proteome research 16 30230343
1990 Protein requirement of fast- and slow-growing chicks. British poultry science 16 2097034
2019 MGS-Fast: Metagenomic shotgun data fast annotation using microbial gene catalogs. GigaScience 15 30942867
2005 Autophagosomes: a fast-food joint for unexpected guests. Autophagy 15 16874034
2016 ZIKA--How fast does this virus mutate? Dong wu xue yan jiu = Zoological research 14 27029869
2011 NOD so fast: NLRX1 puts the brake on inflammation. Immunity 14 21703534