Affinage

EXPH5

Exophilin-5 · UniProt Q8NEV8

Length
1989 aa
Mass
222.5 kDa
Annotated
2026-04-28
23 papers in source corpus 6 papers cited in narrative 6 extracted findings

Mechanistic narrative

Synthesis pass · prose summary of the discoveries below

EXPH5 (Slac2-b/exophilin-5) is a Rab27 effector that couples intracellular vesicle trafficking to exocytosis and cell adhesion. It binds specifically to GTP-bound Rab27A/B through its Slp homology domain (SHD) on secretory granules, and disruption of this interaction inhibits regulated exocytosis in secretory cells (PMID:15039459). EXPH5 mediates docking of multivesicular endosomes (MVEs) at the plasma membrane to promote exosome secretion, as its silencing causes perinuclear MVE redistribution and reduced exosome release (PMID:19966785). In keratinocytes, EXPH5 coordinates trafficking of CD63+ extracellular vesicles containing extracellular matrix proteins to control focal adhesion dynamics and cell–matrix adhesion, and loss-of-function mutations in EXPH5 cause inherited epidermolysis bullosa simplex with keratin cytoskeleton disruption and skin fragility (PMID:23176819, PMID:32890627).

Mechanistic history

Synthesis pass · year-by-year structured walk · 6 steps
  1. 2004 High

    Establishing EXPH5 as a GTP-Rab27-specific effector answered how Rab27 couples to downstream vesicle trafficking machinery: Slac2-b binds GTP-Rab27A/B via its SHD and this interaction is required for stimulated exocytosis in secretory acinar cells.

    Evidence Co-immunoprecipitation, subcellular fractionation, and permeabilized cell secretion assay with recombinant SHD competition and blocking antibodies in parotid acinar cells

    PMID:15039459

    Open questions at the time
    • The downstream effector mechanism linking Rab27–EXPH5 binding to vesicle fusion was not identified
    • Whether EXPH5 functions in non-secretory cell types was unknown
  2. 2006 Medium

    Demonstrating that the Slac2-b SHD quantitatively captures GTP-Rab27 in platelets confirmed the generality of the EXPH5–Rab27 interaction across secretory cell types and revealed that resting Rab27 is predominantly GTP-loaded.

    Evidence Recombinant SHD pull-down assay and thin-layer chromatography of Rab27-bound nucleotides in permeabilized platelets

    PMID:16880209

    Open questions at the time
    • EXPH5 was used as a biochemical tool rather than the primary subject; its endogenous role in platelets was not tested
    • No direct assessment of EXPH5 loss-of-function in platelet granule secretion
  3. 2009 High

    Placing EXPH5 in the exosome secretion pathway resolved the question of which Rab27b effector mediates MVE docking at the plasma membrane: silencing EXPH5 phenocopied Rab27b loss, causing perinuclear MVE accumulation and reduced exosome release.

    Evidence RNAi screen in HeLa cells with exosome secretion quantification and MVE localization imaging

    PMID:19966785

    Open questions at the time
    • The molecular mechanism by which EXPH5 tethers MVEs to the plasma membrane was not determined
    • Whether EXPH5 acts alone or requires additional tethering/SNARE factors was unresolved
  4. 2012 High

    Discovery that EXPH5 loss-of-function mutations cause epidermolysis bullosa simplex established the gene's non-redundant role in keratinocyte adhesion and linked its vesicle-trafficking function to human disease and cytoskeletal integrity.

    Evidence Whole-exome sequencing in patients, shRNA knockdown in keratinocytes, electron microscopy, immunofluorescence colocalization of Slac2-b with Rab27B and β4 integrin, and adhesion assays

    PMID:23176819

    Open questions at the time
    • How EXPH5 loss disrupts keratin intermediate filament organization was not mechanistically explained
    • Whether the skin fragility reflects defective integrin trafficking, ECM secretion, or both was unclear
  5. 2020 High

    Demonstrating that EXPH5 controls CD63+ vesicle trafficking to deliver ECM cargo and regulate focal adhesion dynamics resolved the cellular mechanism underlying the adhesion defect in EXPH5-deficient keratinocytes.

    Evidence Patient-derived primary keratinocytes and shRNA knockdown with live imaging of CD63+ vesicles, extracellular vesicle proteomics, and focal adhesion dynamics analysis

    PMID:32890627

    Open questions at the time
    • The specific cargo receptor or sorting signal directing ECM proteins into EXPH5-dependent vesicles is unknown
    • Whether EXPH5 directly interacts with focal adhesion components or acts indirectly through vesicle delivery was not resolved
  6. 2024 Medium

    Identification of EXPH5 as an ATM kinase substrate raised the possibility that DNA damage signaling modulates EXPH5-dependent vesicle trafficking, though the functional significance of this phosphorylation was not tested.

    Evidence Global phosphoproteomics with ATM/ATR substrate profiling in ATM-depleted human neuroblastoma cells

    PMID:39615799

    Open questions at the time
    • No functional validation of the specific EXPH5 phosphorylation event was performed
    • The phosphorylation site(s) on EXPH5 and their effect on Rab27 binding or vesicle trafficking are unknown
    • Whether ATM-dependent phosphorylation of EXPH5 is relevant in keratinocytes or other physiological contexts is untested

Open questions

Synthesis pass · forward-looking unresolved questions
  • Major unresolved questions include the structural basis of EXPH5–Rab27 interaction, the identity of downstream tethering/fusion partners at the plasma membrane, how EXPH5 loss leads to keratin cytoskeleton disruption, and whether ATM-mediated phosphorylation of EXPH5 is functionally significant.
  • No crystal structure or cryo-EM structure of EXPH5 or its complexes exists
  • The plasma membrane tethering or SNARE partners that cooperate with EXPH5 for vesicle fusion are unidentified
  • The mechanism connecting EXPH5 vesicle trafficking to keratin intermediate filament organization is unknown

Mechanism profile

Synthesis pass · controlled-vocabulary classification · explore literature graph →
Molecular activity
GO:0060090 molecular adaptor activity 3
Localization
GO:0031410 cytoplasmic vesicle 3 GO:0005886 plasma membrane 2
Pathway
R-HSA-5653656 Vesicle-mediated transport 3 R-HSA-1500931 Cell-Cell communication 2
Partners

Evidence

Reading pass · 6 per-paper findings extracted from the source corpus
Year Finding Method Journal Conf PMIDs
2009 EXPH5 (Slac2-b/exophilin-5) functions as a Rab27b effector in the exosome secretion pathway; silencing EXPH5 inhibited exosome secretion and phenocopied Rab27b silencing, including redistribution of multivesicular endosomes (MVEs) toward the perinuclear region, establishing EXPH5's role in MVE docking at the plasma membrane. RNAi screen in HeLa cells, RNA interference knockdown with phenotypic readout (exosome secretion quantification, MVE localization by imaging) Nature cell biology High 19966785
2004 Slac2-b (EXPH5) binds specifically to GTP-bound Rab27A/B (but not other Rabs) through its Slp homology domain (SHD), forming a complex on secretory granules in vivo; disruption of the Rab27B–Slac2-b interaction by introducing recombinant SHD or blocking antibodies strongly inhibited stimulated exocytosis in parotid acinar cells. Subcellular fractionation, co-immunoprecipitation, immunohistochemistry, permeabilized cell secretion assay with recombinant domain competition and blocking antibodies Journal of cell science High 15039459
2006 The Slp homology domain (SHD) of Slac2-b (EXPH5) was used as a pull-down tool to quantify GTP-bound Rab27 in platelets, confirming Slac2-b binds specifically to GTP-Rab27; Rab27 in unstimulated platelets is predominantly GTP-bound and undergoes GTP hydrolysis upon granule secretion, with Slac2-b binding used as functional readout. Pull-down assay using recombinant Slac2-b SHD domain, thin-layer chromatography of nucleotides from immunoprecipitated Rab27, permeabilized platelet secretion assay The Journal of biological chemistry Medium 16880209
2012 Loss-of-function mutations in EXPH5 cause inherited skin fragility (epidermolysis bullosa simplex) associated with disruption of keratinocyte adhesion in the lower epidermis, increased perinuclear vesicles, and cytoskeletal disruption (keratin intermediate filaments); Slac2-b colocalizes with Rab27B and β4 integrin at early adhesion initiation sites in spreading keratinocytes, establishing its role in keratinocyte biology. Whole-exome sequencing, shRNA knockdown in normal keratinocytes, immunofluorescence colocalization, transmission electron microscopy, keratinocyte adhesion assay American journal of human genetics High 23176819
2020 Slac2-b (EXPH5) regulates keratinocyte cell–matrix adhesion and migration by coordinating trafficking of CD63+ extracellular vesicles to the plasma membrane; loss of Slac2-b causes perinuclear accumulation of CD63+ vesicles, reduces Rab27a protein expression, reduces secretion of extracellular vesicles containing extracellular matrix proteins, and impairs focal adhesion dynamics as revealed by live imaging. Primary keratinocytes from EXPH5-mutant patients, shRNA knockdown, live cell imaging of CD63+ vesicle trafficking, extracellular vesicle isolation and proteomics, focal adhesion dynamics analysis The Journal of investigative dermatology High 32890627
2024 EXPH5 is a substrate of ATM kinase phosphorylation; phosphoproteomic analysis identified EXPH5 as among the most strongly downregulated ATM/ATR substrate phosphopeptides upon ATM depletion, implicating EXPH5 in ATM-regulated protein secretion and endosome dynamics. Global proteome and phosphoproteomics (ATM/ATR substrate profiling) in human neuroblastoma cells with ATM depletion Neurobiology of disease Medium 39615799

Source papers

Stage 0 corpus · 23 papers · ranked by NIH iCite citations
Year Title Journal Citations PMID
2009 Rab27a and Rab27b control different steps of the exosome secretion pathway. Nature cell biology 2134 19966785
2004 The small GTPase Rab27B regulates amylase release from rat parotid acinar cells. Journal of cell science 94 15039459
2012 Germline Mutation in EXPH5 Implicates the Rab27B Effector Protein Slac2-b in Inherited Skin Fragility. American journal of human genetics 57 23176819
2006 Constitutive GDP/GTP exchange and secretion-dependent GTP hydrolysis activity for Rab27 in platelets. The Journal of biological chemistry 49 16880209
2016 Genomic Characterization of Metformin Hepatic Response. PLoS genetics 42 27902686
2015 Recently Identified Forms of Epidermolysis Bullosa. Annals of dermatology 35 26719633
2018 Next generation sequencing identifies double homozygous mutations in two distinct genes (EXPH5 and COL17A1) in a patient with concomitant simplex and junctional epidermolysis bullosa. Human mutation 27 30016581
2023 Revealing EXPH5 as a potential diagnostic gene biomarker of the late stage of COPD based on machine learning analysis. Computers in biology and medicine 21 36746116
2016 Association of Epidermolysis Bullosa Simplex With Mottled Pigmentation and EXPH5 Mutations. JAMA dermatology 18 27384765
2023 Selection signatures for local and regional adaptation in Chinese Mongolian horse breeds reveal candidate genes for hoof health. BMC genomics 16 36658473
2022 Pathomechanisms of epidermolysis bullosa: Beyond structural proteins. Matrix biology : journal of the International Society for Matrix Biology 11 35504439
2020 Slac2-b Coordinates Extracellular Vesicle Secretion to Regulate Keratinocyte Adhesion and Migration. The Journal of investigative dermatology 11 32890627
2014 Mutations in EXPH5 result in autosomal recessive inherited skin fragility. The British journal of dermatology 10 24443915
2015 Dissecting the mechanism of colorectal tumorigenesis based on RNA-sequencing data. Experimental and molecular pathology 9 25576648
2016 A novel homozygous deletion in EXPH5 causes a skin fragility phenotype. Clinical and experimental dermatology 7 27730671
2020 Exome Sequencing Analysis Identifies Rare Variants in ATM and RPL8 That Are Associated With Shorter Telomere Length. Frontiers in genetics 6 32425970
2023 A human identification system for hair shaft using RNA polymorphism. Forensic science international. Genetics 5 37611365
2024 The ataxia-telangiectasia disease protein ATM controls vesicular protein secretion via CHGA and microtubule dynamics via CRMP5. Neurobiology of disease 4 39615799
2025 Predictive effect and clinical diagnosis significance of exosome-related genes for nonalcoholic fatty liver disease-related hepatocellular carcinoma. Scientific reports 3 40595076
2024 Rare variants analyses suggest novel cleft genes in the African population. Scientific reports 3 38902479
2022 Potential di-genic contribution to guttate leukoderma as the predominant feature of epidermolysis bullosa simplex. Experimental dermatology 2 35960249
2024 Identification of Pathogenic Pathways for Recurrence of Focal Segmental Glomerulosclerosis after Kidney Transplantation. Diagnostics (Basel, Switzerland) 1 39125467
2024 Rare Variants Analyses Suggest Novel Cleft Genes in the African Population. Research square 0 38464065