Affinage

EPPK1

Epiplakin · UniProt P58107

Length
5088 aa
Mass
555.7 kDa
Annotated
2026-06-09
43 papers in source corpus 12 papers cited in narrative 12 extracted findings
Cross-family judge vs UniProt: Affinage preferred faithfulness: 7/7 claims corpus-supported (100%)

Mechanistic narrative

Synthesis pass · prose summary of the discoveries below

EPPK1 (epiplakin) is a plakin-family cytoskeletal linker that organizes and protects the keratin intermediate filament network, acting as a stress-inducible keratin chaperone (PMID:25617501, PMID:36231039). It binds keratin 8 and keratin 18 through multiple domains, and in its absence keratin aggregates form more readily under phosphatase-inhibitor or in vivo liver-injury stress—a defect rescuable by the chemical chaperone TMAO—establishing a role in disease-induced keratin reorganization (PMID:25617501). Its engagement of the filament network is conditional: EPPK1 is diffuse in resting cells but undergoes a rapid, reversible, Ca2+-dependent switch to a keratin filament-associated state upon ER, oxidative, or UV stress, where it reduces keratin dynamics and stabilizes the network (PMID:36231039). Consistent with a structural/mechanical role, EPPK1 loss in retinal Müller cells lowers traction forces and alters cell size, shape, and filopodia (PMID:36334068). Beyond cytoskeletal organization, EPPK1 is repeatedly implicated as a driver of epithelial proliferation, invasion, and EMT in cancer: it is transcriptionally activated by KLF5 binding its promoter (PMID:33827480) and post-transcriptionally upregulated through METTL3-mediated m6A modification of its mRNA (PMID:38293837), and it functions downstream as an upstream activator of PI3K/AKT signaling (PMID:35238170, PMID:38293837) and of a p38 MAPK/c-Jun/JUP axis that it engages via direct dihydrotestosterone binding in a non-androgen-receptor manner (PMID:37328487). EPPK1 also acts as an RNA-binding protein that binds and stabilizes YAP mRNA to promote tumor cell proliferation, invasion, and immune escape (PMID:41569058), and its CRISPR knockout drives mesenchymal-to-epithelial transition with MYC downregulation and p53 upregulation (PMID:38594604). In tissue contexts, EPPK1 marks pancreatic and hepatic progenitor/regenerating cell populations (PMID:18498355), and its expression is downregulated by IFN-γ in psoriatic epidermis (PMID:40746860).

Mechanistic history

Synthesis pass · year-by-year structured walk · 12 steps
  1. 2008 Medium

    Established EPPK1 as a marker of progenitor and regenerating epithelial cell populations, linking it to tissue renewal before any mechanistic role was known.

    Evidence Immunohistochemistry and lineage-marker co-expression in mouse embryonic/adult pancreas plus pancreatitis and partial pancreatectomy models

    PMID:18498355

    Open questions at the time
    • Marker-only association with no functional perturbation
    • Does not establish whether EPPK1 contributes to progenitor identity or expansion
  2. 2011 Low

    Extended the progenitor-marker observation to hepatic oval cells, suggesting a broadly shared role across epithelial regenerative compartments.

    Evidence Immunohistochemistry and lineage-marker co-localization in CDE-diet mouse liver injury

    PMID:21216305

    Open questions at the time
    • Co-localization only, no functional perturbation of EPPK1
    • Single lab, descriptive
  3. 2015 High

    Resolved the first molecular function—EPPK1 binds K8/K18 and acts as a chaperone for stress-induced keratin reorganization—answering what EPPK1 does at the cytoskeleton.

    Evidence Eppk1-/- mouse liver injury models, primary hepatocyte phosphatase-inhibitor treatment, K8/K18 binding assays, TMAO rescue

    PMID:25617501

    Open questions at the time
    • Domain-level determinants of keratin binding not mapped to function
    • Chaperone mechanism inferred from TMAO rescue rather than direct biochemistry
  4. 2022 High

    Defined the regulatory logic of keratin engagement—a Ca2+-dependent, stress-triggered switch from diffuse to filament-associated state that reduces keratin dynamics.

    Evidence Live-cell imaging of tagged EPPK1/keratin, Ca2+ manipulation, FRAP under ER/oxidative/UV stress in epithelial cells

    PMID:36231039

    Open questions at the time
    • Ca2+ sensor/effector that drives relocalization unidentified
    • Whether the same switch operates in vivo not tested
  5. 2022 Medium

    Showed EPPK1 sets the mechanical properties of epithelial cells, generalizing its cytoskeletal role to traction-force generation and morphology.

    Evidence EPPK1 knockout in a human Müller cell line, traction force microscopy, morphometry

    PMID:36334068

    Open questions at the time
    • Link between traction-force change and keratin organization not established
    • No rescue experiment
  6. 2021 High

    Identified the first direct upstream transcriptional regulator (KLF5) and placed EPPK1 upstream of p38 in driving proliferation, opening a cancer-signaling role.

    Evidence ChIP and luciferase reporter for KLF5 at the EPPK1 promoter, siRNA epistasis, p38 western blot, proliferation assays in HeLa cells

    PMID:33827480

    Open questions at the time
    • How EPPK1 mechanistically activates p38 not defined
    • Generality across tumor types not addressed at this stage
  7. 2022 Medium

    Connected EPPK1 to PI3K/AKT activation as a driver of proliferation, invasion, and EMT in esophageal squamous carcinoma.

    Evidence siRNA knockdown with proliferation/migration/invasion/apoptosis assays and PI3K/AKT and EMT marker western blots in ESCC cells

    PMID:35238170

    Open questions at the time
    • No rescue experiment
    • Mechanism by which EPPK1 engages PI3K/AKT unknown
  8. 2023 High

    Revealed an unexpected ligand-sensing function—direct DHT binding by EPPK1 driving a non-androgen-receptor p38/c-Jun/JUP axis in bladder cancer.

    Evidence Biotinylated DHT pull-down, siRNA, p38 inhibitor, ChIP for c-Jun at JUP promoter, xenograft and BBN carcinogenesis models

    PMID:37328487

    Open questions at the time
    • DHT-binding site/structural basis not defined
    • How DHT binding transduces to p38 activation unresolved
  9. 2024 High

    Defined a post-transcriptional control layer—METTL3-mediated m6A modification of EPPK1 mRNA—as an upstream driver of EPPK1 expression and PI3K/AKT signaling.

    Evidence MeRIP, RIP, dual-luciferase, siRNA, EPPK1 rescue, xenograft in esophageal cancer cells

    PMID:38293837

    Open questions at the time
    • m6A reader mediating EPPK1 mRNA fate not identified
    • Whether m6A affects stability vs translation not separated
  10. 2024 Medium

    Showed EPPK1 loss reprograms transcription toward an epithelial, tumor-suppressive state (MET, MYC down, p53 up), linking it to lung adenocarcinoma and smoke exposure.

    Evidence CRISPR-Cas9 knockout, RNA-seq, western blot, proliferation/invasion assays, cigarette smoke exposure model

    PMID:38594604

    Open questions at the time
    • Direct vs indirect control of MYC/p53 not distinguished
    • Mechanism connecting EPPK1 to transcriptional reprogramming unknown
  11. 2026 Medium

    Established a second molecular activity—EPPK1 as an RNA-binding protein that stabilizes YAP mRNA—defining a post-transcriptional oncogenic axis.

    Evidence RIP for EPPK1-YAP mRNA, mRNA stability assay, siRNA, YAP overexpression rescue, xenograft in ovarian cancer

    PMID:41569058

    Open questions at the time
    • RNA-binding determinants within EPPK1 not mapped
    • Breadth of EPPK1's mRNA targets beyond YAP unknown
  12. 2025 Medium

    Placed EPPK1 in inflammatory skin homeostasis, identifying IFN-γ as the cytokine that suppresses it in psoriatic epidermis.

    Evidence scRNA-seq of psoriatic vs healthy skin, immunofluorescence, ex vivo IFN-γ treatment of human skin, RNA-seq of Eppk1-/- murine epidermis

    PMID:40746860

    Open questions at the time
    • Mechanism of IFN-γ-mediated EPPK1 repression not defined
    • Functional consequence of EPPK1 loss for the psoriatic phenotype not established

Open questions

Synthesis pass · forward-looking unresolved questions
  • How EPPK1's keratin-chaperone/cytoskeletal function mechanistically connects to its cancer signaling roles (PI3K/AKT, p38, YAP mRNA stabilization) remains unresolved.
  • No unified mechanism linking filament organization to growth-signaling outputs
  • Structural basis of DHT binding and RNA binding undefined
  • No structural model of the multidomain protein

Mechanism profile

Synthesis pass · controlled-vocabulary classification · explore literature graph →
Molecular activity
GO:0005198 structural molecule activity 2 GO:0008092 cytoskeletal protein binding 2 GO:0003723 RNA binding 1 GO:0044183 protein folding chaperone 1
Localization
GO:0005856 cytoskeleton 3 GO:0005829 cytosol 1
Pathway
R-HSA-1643685 Disease 5 R-HSA-162582 Signal Transduction 3 R-HSA-8953897 Cellular responses to stimuli 1
Partners

Evidence

Reading pass · 12 per-paper findings extracted from the source corpus
Year Finding Method Journal Conf PMIDs
2015 Epiplakin (EPPK1) binds to keratin 8 (K8) and K18 via multiple domains in hepatocytes and cholangiocytes. Eppk1-deficient mice subjected to bile duct ligation or DDC diet developed more pronounced liver injury with larger keratin granules, indicating impaired disease-induced keratin network reorganization. Primary Eppk1-/- hepatocytes showed increased keratin aggregate formation after okadaic acid treatment, rescued by the chemical chaperone TMAO, establishing EPPK1 as a chaperone for keratin reorganization under stress. Eppk1-/- mouse liver injury models (CBDL, DDC diet), primary hepatocyte culture with phosphatase inhibitor treatment, co-immunoprecipitation/binding assays for K8/K18, TMAO rescue experiments, transfection experiments Journal of hepatology High 25617501
2022 EPPK1 undergoes a Ca2+-dependent switch from a diffuse cytoplasmic distribution to a keratin filament-associated state. Under standard conditions EPPK1 is not associated with keratin filaments; ER stress, oxidative stress, UV stress, or cell fixation induce rapid and reversible EPPK1 association with keratin filaments. This re-localization requires elevation of cytoplasmic Ca2+ and leads to significantly reduced keratin dynamics, suggesting EPPK1 stabilizes the keratin network during stress. Live-cell imaging of fluorescently tagged EPPK1 and keratin in epithelial cells, Ca2+ manipulation experiments, FRAP-based measurement of keratin dynamics Cells High 36231039
2022 EPPK1 knockout in a human Müller cell-derived cell line led to a decrease in traction forces and changes in cell size, shape, and filopodia characteristics, establishing EPPK1 as a regulator of mechanical properties and morphology in retinal Müller cells. EPPK1 was identified as highly expressed in macular Müller cells compared to rod-associated Müller cells. EPPK1 knockout in human Müller cell line, traction force microscopy, cell morphology analysis, comparative proteomics of human and mouse retinal regions Glia Medium 36334068
2023 DHT (dihydrotestosterone) directly binds to EPPK1 protein (established by biotinylated DHT pull-down). EPPK1 knockdown abolished DHT-promoted proliferation and invasion in bladder cancer cells. In DHT-treated high-EPPK1 cells, JUP expression was elevated and c-Jun bound the JUP promoter. DHT-induced activation of p38 MAPK and c-Jun was absent in EPPK1 knockdown cells, placing EPPK1 upstream of the p38 MAPK/c-Jun/JUP signaling axis in a non-androgen receptor pathway. Biotinylated DHT pull-down assay, siRNA knockdown, p38 inhibitor treatment, ChIP for c-Jun at JUP promoter, xenograft mouse model, in vivo BBN carcinogenesis model Cell death & disease High 37328487
2021 KLF5 transcription factor directly binds to the EPPK1 promoter (established by chromatin immunoprecipitation and reporter gene assay) and activates EPPK1 transcription. KLF5-mediated cell proliferation in HeLa cells is partially dependent on EPPK1 upregulation, and EPPK1 lies upstream of p38 signaling in this proliferation pathway. ChIP assay, luciferase reporter gene assay, siRNA knockdown of KLF5 and EPPK1, adenovirus-mediated overexpression, western blot for p38 signaling, CCK8 proliferation assay BMC cancer High 33827480
2022 EPPK1 promotes esophageal squamous cell carcinoma (ESCC) cell proliferation, migration, invasion, and EMT, and suppresses apoptosis. Silencing EPPK1 reduced activation of the PI3K/AKT signaling pathway, placing EPPK1 as an upstream activator of PI3K/AKT in ESCC cells. siRNA knockdown, CCK-8 assay, colony formation, wound healing, Transwell invasion, flow cytometry apoptosis, western blot for PI3K/AKT pathway components and EMT markers Thoracic cancer Medium 35238170
2024 METTL3 mediates N6-methyladenosine (m6A) modification of EPPK1 mRNA (confirmed by MeRIP assay), and EPPK1 is a direct target of METTL3. METTL3 deficiency reduces EPPK1 expression and inactivates the PI3K/AKT pathway in esophageal cancer cells. Rescue of EPPK1 expression reversed the inhibitory effects of METTL3 knockdown on proliferation, invasion, migration, and stemness. MeRIP (m6A methylation immunoprecipitation), RIP assay, dual-luciferase reporter assay, siRNA knockdown, rescue overexpression, MTT/EdU/colony/Transwell/wound-healing assays, xenograft tumor experiments, IHC Environmental toxicology High 38293837
2024 CRISPR-Cas9 knockout of EPPK1 in lung adenocarcinoma cell lines induced a mesenchymal-to-epithelial transition (MET), diminished cell proliferation and invasion, downregulated MYC and upregulated p53 at both protein and RNA levels, and altered expression of oncogenes, anti-apoptosis, and angiogenesis genes. EPPK1 protein expression was also increased in bronchial epithelial cells after 16 weeks of cigarette smoke exposure. CRISPR-Cas9 KO, RNA sequencing, western blot, proliferation and invasion assays, cigarette smoke exposure model, GO enrichment analysis BMC cancer Medium 38594604
2026 EPPK1 functions as an RNA-binding protein that binds YAP mRNA and enhances its stability. EPPK1 knockdown reduced YAP expression and suppressed ovarian cancer cell proliferation, migration, invasion, and immune escape; these effects were rescued by YAP overexpression, placing EPPK1 upstream of YAP in a post-transcriptional regulatory axis. RIP assay for EPPK1-YAP mRNA interaction, mRNA stability assay, siRNA knockdown, YAP overexpression rescue, xenograft model, in vitro proliferation/migration/invasion/immune escape assays Journal of physiology and pharmacology Medium 41569058
2008 Eppk1 is expressed in pancreatic progenitor cells (Eppk1+/Pdx1+/Sox9+ multipotent progenitor cells) in early pancreatic epithelium, later confined to endocrine/exocrine progenitors and duct cells. In the adult pancreas, Eppk1 marks centroacinar cells and duct cells. In caerulein-induced pancreatitis and partial pancreatectomy regeneration models, Eppk1-positive cells expand, identifying it as a marker of pancreatic progenitor/regenerating cell populations. Immunohistochemistry, co-expression analysis with lineage markers (Pdx1, Sox9, Ngn3, p48) in mouse embryonic and adult pancreas, acute pancreatitis and partial pancreatectomy models Genes to cells Medium 18498355
2011 Eppk1 marks hepatic progenitor cells (oval cells) in CDE diet-injured mouse liver, co-expressing the progenitor marker A6, cholangiocyte markers (cytokeratins, E-cadherin, osteopontin, Sox9), and PCNA, identifying Eppk1+ cells as transient amplifying hepatic progenitors. In normal liver, Eppk1 is confined to cholangiocytes/bile duct cells. Immunohistochemistry and co-expression analysis with multiple lineage markers in CDE diet mouse liver injury model and normal developing liver Gene expression patterns Low 21216305
2025 EPPK1 expression is specifically downregulated in the suprabasal granular layer of psoriatic epidermis compared to healthy skin. IFN-γ treatment of human ex vivo skin explants downregulates EPPK1, identifying IFN-γ as the main cytokine responsible for EPPK1 downregulation in psoriasis. Transcriptomic profiling of Eppk1-/- murine epidermis showed reduced expression of genes involved in epithelial adhesion and lipid metabolism, partially overlapping with the psoriatic keratinocyte signature. scRNA-seq of psoriatic vs healthy skin, immunofluorescence of human psoriasis samples, ex vivo cytokine treatment of human skin explants, RNA-seq of Eppk1-/- murine epidermis Frontiers in cell and developmental biology Medium 40746860

Source papers

Stage 0 corpus · 43 papers · ranked by NIH iCite citations
Year Title Journal Citations PMID
2014 Mutational landscape of intrahepatic cholangiocarcinoma. Nature communications 353 25526346
2018 Quantitative Proteomic Analysis Identifies AHNAK (Neuroblast Differentiation-associated Protein AHNAK) as a Novel Candidate Biomarker for Bladder Urothelial Carcinoma Diagnosis by Liquid-based Cytology. Molecular & cellular proteomics : MCP 68 29950347
2022 Early prediction of clinical response to anti-TNF treatment using multi-omics and machine learning in rheumatoid arthritis. Rheumatology (Oxford, England) 44 34175943
2020 Genomic Underpinnings of Tumor Behavior in In Situ and Early Lung Adenocarcinoma. American journal of respiratory and critical care medicine 44 31747302
2014 Potential predictive plasma biomarkers for cervical cancer by 2D-DIGE proteomics and Ingenuity Pathway Analysis. Tumour biology : the journal of the International Society for Oncodevelopmental Biology and Medicine 43 25427637
2013 De novo microduplications at 1q41, 2q37.3, and 8q24.3 in patients with VATER/VACTERL association. European journal of human genetics : EJHG 41 23549274
2019 A Proteome Approach Reveals Differences between Fertile Women and Patients with Repeated Implantation Failure on Endometrial Level⁻Does hCG Render the Endometrium of RIF Patients? International journal of molecular sciences 35 30669470
2008 Expression patterns of epiplakin1 in pancreas, pancreatic cancer and regenerating pancreas. Genes to cells : devoted to molecular & cellular mechanisms 35 18498355
2020 Identification of a Multi-RNA-Type-Based Signature for Recurrence-Free Survival Prediction in Patients with Uterine Corpus Endometrial Carcinoma. DNA and cell biology 29 32105510
2022 Identification of Cancer-Associated Fibroblast Subtype of Triple-Negative Breast Cancer. Journal of oncology 26 35505821
2015 Epiplakin attenuates experimental mouse liver injury by chaperoning keratin reorganization. Journal of hepatology 23 25617501
2023 Androgen dihydrotestosterone promotes bladder cancer cell proliferation and invasion via EPPK1-mediated MAPK/JUP signalling. Cell death & disease 22 37328487
2022 Genome-wide associations for heat stress response suggest potential candidate genes underlying milk fatty acid composition in dairy cattle. Journal of dairy science 19 35094857
2021 KLF5-mediated Eppk1 expression promotes cell proliferation in cervical cancer via the p38 signaling pathway. BMC cancer 18 33827480
2022 Investigation of the effects of overexpression of jumping translocation breakpoint (JTB) protein in MCF7 cells for potential use as a biomarker in breast cancer. American journal of cancer research 16 35530281
2022 The new landscape of differentially expression proteins in placenta tissues of gestational diabetes based on iTRAQ proteomics. Placenta 16 36473392
2023 A Multi-Trait Association Analysis of Brain Disorders and Platelet Traits Identifies Novel Susceptibility Loci for Major Depression, Alzheimer's and Parkinson's Disease. Cells 15 36672180
2022 Downstream Regulatory Network of MYBL2 Mediating Its Oncogenic Role in Melanoma. Frontiers in oncology 15 35664780
2022 Retinal regions shape human and murine Müller cell proteome profile and functionality. Glia 14 36334068
2024 METTL3-mediated m6A modification of EPPK1 to promote the development of esophageal cancer through regulating the PI3K/AKT pathway. Environmental toxicology 11 38293837
2018 Identification of Local Clusters of Mutation Hotspots in Cancer-Related Genes and Their Biological Relevance. IEEE/ACM transactions on computational biology and bioinformatics 10 29993813
2011 Epiplakin1 is expressed in the cholangiocyte lineage cells in normal liver and adult progenitor cells in injured liver. Gene expression patterns : GEP 10 21216305
2022 Effective Treatment of Low-Grade Myofibroblastic Sarcoma with Apatinib: A Case Report and Literature Review. Pharmacogenomics and personalized medicine 9 35698620
2017 Particular gene upregulation and p53 heterogeneous expression in TP53-mutated maxillary carcinoma. Oncology letters 9 29085461
2022 Epiplakin1 promotes the progression of esophageal squamous cell carcinoma by activating the PI3K-AKT signaling pathway. Thoracic cancer 8 35238170
2019 Exome-wide search and functional annotation of genes associated in patients with severe tick-borne encephalitis in a Russian population. BMC medical genomics 6 31122248
2023 A clinical proteomics study of exhaled breath condensate and biomarkers for pulmonary embolism. Journal of breath research 5 37939397
2024 Elucidating the role of EPPK1 in lung adenocarcinoma development. BMC cancer 4 38594604
2022 Comparative genomics reveals evolutionary loss of epiplakin in cetaceans. Scientific reports 4 35064199
2021 Pathological and genomic phenotype of second neuroendocrine carcinoma during long-term follow-up after radical radiotherapy for nasopharyngeal carcinoma. Radiation oncology (London, England) 4 34635145
2010 Expression of Epiplakin1 in the developing and adult mouse retina. Japanese journal of ophthalmology 4 20151282
2025 Insights from Tandem Mass Tag (TMT) Proteomic Analysis on Protein Network Modification in Control of Yak Hair Follicle Cycle. International journal of molecular sciences 3 40003997
2022 Gene Mutations Related to Glucocorticoid Resistance in Pediatric Acute Lymphoblastic Leukemia. Frontiers in pediatrics 3 35733807
2022 Adaptive resistance is not responsible for long-term drug resistance in a cellular model of triple negative breast cancer. Gene 3 36195266
2022 A Ca2+-Mediated Switch of Epiplakin from a Diffuse to Keratin-Bound State Affects Keratin Dynamics. Cells 3 36231039
2025 Interactive effects of genotype with prenatal stress on DNA methylation at birth. Molecular psychiatry 2 41136745
2009 Exclusion of EGFR, HRAS, DSP, JUP, CTNNB1, PLEC1, and EPPK1 as functional candidate genes in 7 families with syndromic diarrhoea. Journal of pediatric gastroenterology and nutrition 2 19322062
2025 Epiplakin expression is lost in psoriatic skin lesions and is downregulated by IFN-γ in ex vivo skin cultures. Frontiers in cell and developmental biology 1 40746860
2025 Whole-exome sequencing reveals the mutational landscape of head and neck lymphoepithelioma-like carcinoma. Oral oncology 1 40976151
2026 RNA-binding protein Epiplakin 1 promotes ovarian cancer immune escape and distal metastasis by enhancing the RNA stability of yes-associated protein. Journal of physiology and pharmacology : an official journal of the Polish Physiological Society 0 41569058
2026 Hemidesmosome Mutations Contribute to the Onset and Severity of Acquired Autoimmune Bullous Diseases. MedComm 0 41700172
2025 Microbial interactions induce the mutational signature of mismatch repair deficiency in colorectal cancer and associated with EPPK1 mutations. Cancer letters 0 40383409
2025 Potential for Clinical Management of Pancreatic Cancer Through Whole Exome Profiling of Site-Specific Metastases and Matched Primary Tumors. Laboratory investigation; a journal of technical methods and pathology 0 40545177

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