Affinage

EPN2

Epsin-2 · UniProt O95208

Round 2 corrected
Length
641 aa
Mass
68.5 kDa
Annotated
2026-04-28
38 papers in source corpus 6 papers cited in narrative 6 extracted findings

Mechanistic narrative

Synthesis pass · prose summary of the discoveries below

EPN2 (epsin-2) is a clathrin-mediated endocytic adaptor that, together with its paralog EPN1, functions as a specialized sorting factor linking ubiquitinated cargo to the clathrin coat machinery during receptor-mediated endocytosis. EPN2 contains an N-terminal ENTH domain and interacts with AP-2 via DPW motifs, with clathrin directly, and with Eps15 through C-terminal NPF motifs; it localizes to clathrin-coated vesicle fractions and the peri-Golgi region (PMID:10567358). Combined loss of EPN1 and EPN2 in mice causes embryonic lethality due to impaired Notch signaling activation without disrupting housekeeping endocytosis (PMID:19666558), while endothelial-specific deletion elevates VEGFR2 levels and drives aberrant angiogenesis that is rescued by genetic reduction of VEGFR2 (PMID:24311377). In podocytes, epsins including EPN2 sustain cell adhesion through a Cdc42–SRF–β1 integrin signaling axis, and their loss leads to foot process effacement and albuminuria (PMID:33051360).

Mechanistic history

Synthesis pass · year-by-year structured walk · 5 steps
  1. 1999 High

    Identification and molecular characterization of EPN2 established it as a brain-enriched epsin-1 paralog that bridges cargo to the clathrin coat through its ENTH domain, AP-2-binding DPW motifs, clathrin-binding capacity, and Eps15-binding NPF motifs, answering whether mammals possess more than one epsin isoform and defining its interaction repertoire.

    Evidence cDNA cloning, co-immunoprecipitation, pulldown assays, subcellular fractionation, GFP-fusion imaging, and endocytosis inhibition assay in mammalian cells

    PMID:10567358

    Open questions at the time
    • No assessment of whether EPN2 has non-redundant functions compared with EPN1
    • No structural information on the ENTH domain or cargo-recognition interface
    • Physiological cargo specificity unresolved
  2. 2009 High

    Genetic ablation of both Epn1 and Epn2 in mice revealed that epsins are dispensable for housekeeping endocytosis but essential for ligand-dependent Notch receptor activation, resolving the long-standing question of whether mammalian epsins have a cargo-selective signaling role analogous to Drosophila liquid facets.

    Evidence Epn1/Epn2 double-knockout mouse embryos with Notch target gene expression analysis and endocytosis assays in knockout-derived cells

    PMID:19666558

    Open questions at the time
    • Whether EPN2 alone is sufficient for Notch activation remains untested
    • Mechanism by which epsins promote Notch ligand endocytosis versus receptor processing is not defined
    • Tissue-specific requirements beyond embryonic development not addressed
  3. 2013 High

    Endothelial-specific deletion of EPN1/EPN2 demonstrated that epsins specifically mediate activated VEGFR2 internalization and degradation, and that aberrant VEGFR2 accumulation is the causal driver of the resulting pathological angiogenesis — establishing a second major cargo-selective endocytic role for epsins.

    Evidence Conditional endothelial Epn1/Epn2 double-knockout mice with VEGFR2 haploinsufficiency rescue, in vitro EC assays, and in vivo wound healing and tumor angiogenesis models

    PMID:24311377

    Open questions at the time
    • Whether EPN2 binds VEGFR2 directly or through an intermediary adaptor is not resolved
    • Relative contribution of EPN2 versus EPN1 in endothelial cells unknown
    • Fate of internalized VEGFR2 (lysosomal vs. proteasomal degradation) not mechanistically dissected
  4. 2017 Medium

    EPN2 was identified as a direct target of miR-1224, linking post-transcriptional regulation of EPN2 levels to the balance between VEGF and Notch signaling outputs and providing a mechanism by which EPN2 expression tunes angiogenic responses.

    Evidence Luciferase reporter assay for direct miR-1224 targeting, siRNA knockdown, EPN2 overexpression rescue, and tube-formation assays in HUVECs

    PMID:28717225

    Open questions at the time
    • Single-lab finding; independent confirmation of miR-1224–EPN2 axis in vivo is lacking
    • Quantitative relationship between EPN2 protein levels and angiogenic output not defined
    • Whether miR-1224 also targets EPN1 was not assessed
  5. 2020 High

    Podocyte-specific loss of all three epsins (including EPN2) revealed an unexpected role for epsins in maintaining cell adhesion through a Cdc42–SRF–β1 integrin signaling axis, extending epsin function beyond classical endocytic cargo sorting to adhesion-dependent signaling in specialized epithelial cells.

    Evidence Triple-knockout mice with albuminuria, electron microscopy, primary podocyte adhesion/spreading assays, Cdc42 activation measurement, and phenocopy by podocyte-specific Srf deletion

    PMID:33051360

    Open questions at the time
    • Individual contributions of EPN1, EPN2, and EPN3 in podocytes not dissected
    • Mechanism linking epsin endocytic activity to Cdc42 activation remains undefined
    • Whether the Cdc42–SRF axis operates in non-podocyte cell types downstream of epsins is unknown

Open questions

Synthesis pass · forward-looking unresolved questions
  • Open question: how EPN2 distinguishes cargo-selective endocytic events (Notch ligand, VEGFR2) from housekeeping endocytosis at the molecular level, and what non-redundant functions EPN2 has versus EPN1 and EPN3, remain unresolved.
  • No structural basis for cargo selectivity of EPN2
  • Isoform-specific knockout phenotypes for EPN2 alone are lacking
  • Role of EGF-stimulated phosphorylation of EPN2 is functionally uncharacterized

Mechanism profile

Synthesis pass · controlled-vocabulary classification · explore literature graph →
Molecular activity
GO:0060090 molecular adaptor activity 3 GO:0038024 cargo receptor activity 2
Localization
GO:0005794 Golgi apparatus 1 GO:0031410 cytoplasmic vesicle 1
Pathway
R-HSA-162582 Signal Transduction 3 R-HSA-5653656 Vesicle-mediated transport 3

Evidence

Reading pass · 6 per-paper findings extracted from the source corpus
Year Finding Method Journal Conf PMIDs
1999 Epsin 2 (EPN2) was cloned from human and rat brain cDNA libraries and characterized as a paralog of epsin 1. EPN2 contains an ENTH domain, interacts with the clathrin adaptor AP-2 through its central DPW-containing region, binds clathrin, and binds Eps15 through its C-terminal NPF motifs. EPN2 is enriched in brain, is present in clathrin-coated vesicle fractions, localizes to the peri-Golgi region and cell periphery, and high-level overexpression mislocalizes clathrin coat components and inhibits clathrin-mediated endocytosis. cDNA cloning, co-immunoprecipitation, pulldown assays, subcellular fractionation (clathrin-coated vesicle fraction), GFP-fusion live-cell imaging, endocytosis inhibition assay The Journal of biological chemistry High 10567358
2009 Combined genetic inactivation of Epn1 and Epn2 in mice causes embryonic lethality at E9.5–E10 with developmental defects recapitulating global impairment of Notch signaling. Expression of Notch primary target genes is severely reduced in double-knockout embryos, establishing EPN2 (together with EPN1) as a specialized endocytic adaptor required for Notch signaling activation in mammals. Housekeeping clathrin-mediated endocytosis is not impaired in double-knockout cells. Epn1/Epn2 double-knockout mouse generation, embryo phenotyping, Notch target gene expression analysis, endocytosis assays in knockout-derived cells Proceedings of the National Academy of Sciences of the United States of America High 19666558
2013 Endothelial-specific deletion of EPN1 and EPN2 causes elevated VEGFR2 levels and aberrant angiogenesis during embryonic development and in adult mice. Genetic reduction of VEGFR2 by 50% (heterozygosity) rescues normal VEGF signaling, EC proliferation, EC migration, and EC network formation in vitro, and restores normal wound healing, inflammatory angiogenesis, and tumor angiogenesis in vivo, providing the first genetic demonstration that epsins function specifically to downregulate VEGFR2 by mediating activated VEGFR2 internalization and degradation. Conditional endothelial-specific Epn1/Epn2 double-knockout mice, VEGFR2 genetic reduction (Flk1 haploinsufficiency), in vitro EC proliferation/migration/tube-formation assays, in vivo wound healing/tumor angiogenesis assays Arteriosclerosis, thrombosis, and vascular biology High 24311377
2017 EPN2 is a direct target of the mammal-specific microRNA miR-1224. Knockdown of EPN2 stimulates capillary-like tube formation in human umbilical vein endothelial cells, while overexpression of EPN2 suppresses miR-1224-mediated stimulation of tube formation, enhanced VEGF signaling, and repressed NOTCH signaling, confirming EPN2 as a suppressor of angiogenesis acting downstream of miR-1224. Luciferase reporter assay (direct miR-1224 target validation), siRNA knockdown, EPN2 overexpression, tube-formation assay on Matrigel, VEGF/NOTCH signaling readouts Scientific reports Medium 28717225
2020 Podocyte-specific triple knockout of Epn1, Epn2, and Epn3 in mice results in increased albuminuria and foot process effacement. Primary podocytes from knockout mice show defective cell adhesion and spreading attributable to reduced activation of Cdc42 and downstream serum response factor (SRF), leading to diminished β1 integrin expression. Loss of SRF alone phenocopies epsin loss, placing epsins upstream of the Cdc42–SRF–β1 integrin axis in podocyte function. Podocyte-specific triple-knockout mouse generation, albumin/creatinine ratio measurement, electron microscopy (foot process effacement), primary podocyte isolation, cell adhesion/spreading assays, Cdc42 activation assay, SRF and β1 integrin expression analysis, podocyte-specific Srf knockout Journal of the American Society of Nephrology : JASN High 33051360
2006 Mass spectrometry-based phosphoproteomic analysis of EGF-stimulated HeLa cells identified phosphorylation sites on EPN2, indicating that EPN2 undergoes dynamic phosphorylation in response to EGF signaling, and that phosphorylation is modulated at least 2-fold by EGF stimulation. Large-scale quantitative phosphoproteomics (SILAC-MS) of EGF-stimulated HeLa cells Cell Low 17081983

Source papers

Stage 0 corpus · 38 papers · ranked by NIH iCite citations
Year Title Journal Citations PMID
2006 Global, in vivo, and site-specific phosphorylation dynamics in signaling networks. Cell 2861 17081983
2002 Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Proceedings of the National Academy of Sciences of the United States of America 1479 12477932
2015 The BioPlex Network: A Systematic Exploration of the Human Interactome. Cell 1118 26186194
2017 Architecture of the human interactome defines protein communities and disease networks. Nature 1085 28514442
2015 A human interactome in three quantitative dimensions organized by stoichiometries and abundances. Cell 1015 26496610
2020 A reference map of the human binary protein interactome. Nature 849 32296183
2002 Curvature of clathrin-coated pits driven by epsin. Nature 806 12353027
2003 Complete sequencing and characterization of 21,243 full-length human cDNAs. Nature genetics 754 14702039
2021 Dual proteome-scale networks reveal cell-specific remodeling of the human interactome. Cell 705 33961781
2011 Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Briefings in bioinformatics 656 21873635
2018 High-Density Proximity Mapping Reveals the Subcellular Organization of mRNA-Associated Granules and Bodies. Molecular cell 580 29395067
2021 Multilevel proteomics reveals host perturbations by SARS-CoV-2 and SARS-CoV. Nature 532 33845483
2015 A Dynamic Protein Interaction Landscape of the Human Centrosome-Cilium Interface. Cell 433 26638075
2022 OpenCell: Endogenous tagging for the cartography of human cellular organization. Science (New York, N.Y.) 432 35271311
2005 Diversification of transcriptional modulation: large-scale identification and characterization of putative alternative promoters of human genes. Genome research 409 16344560
2004 Proteomic, functional, and domain-based analysis of in vivo 14-3-3 binding proteins involved in cytoskeletal regulation and cellular organization. Current biology : CB 386 15324660
2021 A proximity-dependent biotinylation map of a human cell. Nature 339 34079125
2017 An Approach to Spatiotemporally Resolve Protein Interaction Networks in Living Cells. Cell 328 28388416
2004 Phosphoproteomic analysis of the developing mouse brain. Molecular & cellular proteomics : MCP 291 15345747
1997 Binding specificity and in vivo targets of the EH domain, a novel protein-protein interaction module. Genes & development 290 9303539
2004 Functional proteomics mapping of a human signaling pathway. Genome research 247 15231748
1998 Intersectin, a novel adaptor protein with two Eps15 homology and five Src homology 3 domains. The Journal of biological chemistry 239 9813051
2016 An organelle-specific protein landscape identifies novel diseases and molecular mechanisms. Nature communications 211 27173435
2018 An AP-MS- and BioID-compatible MAC-tag enables comprehensive mapping of protein interactions and subcellular localizations. Nature communications 201 29568061
2014 E-cadherin interactome complexity and robustness resolved by quantitative proteomics. Science signaling 162 25468996
1999 Prediction of the coding sequences of unidentified human genes. XIV. The complete sequences of 100 new cDNA clones from brain which code for large proteins in vitro. DNA research : an international journal for rapid publication of reports on genes and genomes 162 10470851
1999 The epsins define a family of proteins that interact with components of the clathrin coat and contain a new protein module. The Journal of biological chemistry 154 10567358
2019 Mapping the proximity interaction network of the Rho-family GTPases reveals signalling pathways and regulatory mechanisms. Nature cell biology 137 31871319
2019 The Functional Proximal Proteome of Oncogenic Ras Includes mTORC2. Molecular cell 124 30639242
2017 An Interaction Landscape of Ubiquitin Signaling. Molecular cell 119 28190767
2009 Embryonic arrest at midgestation and disruption of Notch signaling produced by the absence of both epsin 1 and epsin 2 in mice. Proceedings of the National Academy of Sciences of the United States of America 96 19666558
2013 Genetic reduction of vascular endothelial growth factor receptor 2 rescues aberrant angiogenesis caused by epsin deficiency. Arteriosclerosis, thrombosis, and vascular biology 42 24311377
2019 LINC00473 promotes hepatocellular carcinoma progression via acting as a ceRNA for microRNA-195 and increasing HMGA2 expression. Biomedicine & pharmacotherapy = Biomedecine & pharmacotherapie 25 31562977
2017 A mammalian mirtron miR-1224 promotes tube-formation of human primary endothelial cells by targeting anti-angiogenic factor epsin2. Scientific reports 16 28717225
2022 Proteomic Identification of Potential Target Proteins of Cathepsin W for Its Development as a Drug Target for Influenza. Microbiology spectrum 12 35867415
2020 Murine Epsins Play an Integral Role in Podocyte Function. Journal of the American Society of Nephrology : JASN 4 33051360
2023 Dissecting the Methylomes of EGFR-Amplified Glioblastoma Reveals Altered DNA Replication and Packaging, and Chromatin and Gene Silencing Pathways. Cancers 2 37444635
2025 Mendelian randomization analysis with the GEO database: Exploring the molecular mechanism underlying insulin therapy for perioperative neurocognitive disorders. European journal of pharmacology 1 40513938