Affinage

ENO3

Beta-enolase · UniProt P13929

Length
434 aa
Mass
47.0 kDa
Annotated
2026-06-09
13 papers in source corpus 9 papers cited in narrative 9 extracted findings
Cross-family judge vs UniProt: tie faithfulness: 5/6 claims corpus-supported (83%)

Mechanistic narrative

Synthesis pass · prose summary of the discoveries below

ENO3 (β-enolase) is a muscle-enriched glycolytic enzyme whose expression and activity drive glycolytic flux across multiple metabolic and oncologic contexts (PMID:35477821). Its skeletal-muscle transcription is governed by an intronic enhancer (intron 1, +504 to +637) in which MEF-2 binds an A/T-rich box and a ubiquitous factor binds a G-rich box, with both elements required for full enhancer activity (PMID:7565752). ENO3 abundance is set by layered post-transcriptional and post-translational control: NSUN5-dependent m5C modification stabilizes ENO3 mRNA to support the Warburg effect in renal carcinoma (PMID:36915728), miR-34a directly targets ENO3 mRNA to suppress it and impair hepatic insulin signaling (PMID:37960269), and CSN5 stabilizes ENO3 protein by limiting its ubiquitin-mediated proteasomal degradation (PMID:41524948). Functionally, ENO3 enhances glycolysis to promote colorectal cancer proliferation and migration (PMID:35477821) and mediates the pro-glycolytic, anti-EMT oncogenic program downstream of CSN5 (PMID:41524948), yet in hepatocellular carcinoma it suppresses proliferation, migration, and invasion by inhibiting Wnt/β-catenin signaling (PMID:35004693). In hepatic lipid disease, ENO3 negatively regulates ferroptosis—elevating GPX4 and SLC7A11—and promotes lipid accumulation, partly through a physical interaction with PKM2 (PMID:33987359, PMID:40400308). A lower-confidence finding links ENO3 to iron homeostasis via an ENO3–IRP1 axis in colonic epithelium (PMID:37006994).

Mechanistic history

Synthesis pass · year-by-year structured walk · 8 steps
  1. 1995 High

    Established how ENO3 achieves muscle-specific transcription, resolving the cis-regulatory and trans-acting basis of its tissue-restricted expression.

    Evidence Deletion/CAT reporter assays, EMSA, DNase I footprinting, and site-directed mutagenesis in C2C12 myogenic cells

    PMID:7565752

    Open questions at the time
    • Identity of the ubiquitous G-box-binding factor not determined
    • Does not connect transcriptional control to enzymatic or metabolic output
  2. 2021 Medium

    Showed ENO3 acts beyond glycolysis as a negative regulator of ferroptosis and a promoter of lipid accumulation in fatty liver disease, linking it to GPX4.

    Evidence Gain/loss-of-function in MCD-diet NASH mice and HFFA-treated L02 hepatocytes with ferroptosis and Oil Red O readouts

    PMID:33987359

    Open questions at the time
    • Mechanism connecting ENO3 to GPX4 not defined
    • Whether the effect requires enolase catalytic activity untested
  3. 2021 Medium

    Revealed a context-dependent tumor-suppressive role for ENO3 in HCC via Wnt/β-catenin inhibition, contrasting with its pro-glycolytic oncogenic roles elsewhere.

    Evidence Gain/loss-of-function in HCC cell lines with proliferation/migration/invasion assays, xenografts, and Wnt/EMT Western blots

    PMID:35004693

    Open questions at the time
    • Molecular link between ENO3 and Wnt/β-catenin components unresolved
    • Reconciliation with pro-tumor glycolytic roles in other cancers not addressed
  4. 2022 Medium

    Demonstrated that ENO3's pro-tumor effect operates through enhanced glycolytic flux, anchoring its oncogenic function to its metabolic activity.

    Evidence Gain/loss-of-function in CRC cell lines with RNA-seq, ATP, and lactate assays

    PMID:35477821

    Open questions at the time
    • Does not identify upstream regulators of ENO3 in CRC
    • Direct enzymatic contribution versus indirect transcriptional effect not separated
  5. 2023 Medium

    Identified two opposing modes of ENO3 expression control—NSUN5-mediated m5C mRNA stabilization and miR-34a-mediated repression—defining post-transcriptional setpoints for ENO3 in cancer and metabolic disease.

    Evidence NSUN5 and miR-34a perturbation with metabolic/insulin readouts; ENO3 rescue and NAFLD patient tissue validation

    PMID:36915728 PMID:37960269

    Open questions at the time
    • Direct m5C mapping on ENO3 transcript not shown
    • Whether both regulators act in the same tissues unknown
  6. 2023 Low

    Proposed an ENO3–IRP1 axis controlling cellular iron levels and ferroptosis in colonic epithelium, extending ENO3 function into iron homeostasis.

    Evidence DSS colitis model, RNA-seq, pharmacological modulation by kumatakenin, and molecular docking

    PMID:37006994

    Open questions at the time
    • ENO3–IRP1 physical interaction not directly validated
    • Docking predictions (Thr208/Val206/Pro203) computational only
    • Causality of the axis not established by direct perturbation of IRP1
  7. 2025 Medium

    Provided direct physical evidence for an ENO3–PKM2 complex driving ferroptosis suppression and lipid accumulation in hepatocytes, mechanistically linking ENO3 to a second glycolytic enzyme.

    Evidence Reciprocal Co-IP, immunofluorescence co-localization, and PKM2 siRNA rescue in FFA-treated THLE-2 cells and MASLD rat liver

    PMID:40400308

    Open questions at the time
    • Interaction interface and stoichiometry undefined
    • Whether the complex alters enzymatic activity of either partner untested
  8. 2026 Medium

    Established post-translational stabilization of ENO3 by CSN5 against ubiquitin-mediated degradation as a mechanism placing ENO3 downstream of an oncogenic regulator.

    Evidence Proteomic profiling, ubiquitination/stability analysis, and ENO3-silencing rescue of CSN5 phenotype in cervical cancer in vitro and in vivo

    PMID:41524948

    Open questions at the time
    • E3 ligase targeting ENO3 not identified
    • Whether CSN5 acts directly or via deneddylation/CSN complex unclear

Open questions

Synthesis pass · forward-looking unresolved questions
  • How ENO3's canonical enolase catalysis is mechanistically coupled to its disparate non-glycolytic roles (ferroptosis, Wnt signaling, iron homeostasis) across tissues remains unresolved.
  • No structural model linking catalytic and moonlighting functions
  • Context-dependence (tumor-suppressive in HCC vs pro-tumor in CRC) not mechanistically explained
  • Direct demonstration that catalytic activity is dispensable for ferroptosis/Wnt effects is absent

Mechanism profile

Synthesis pass · controlled-vocabulary classification · explore literature graph →
Molecular activity
GO:0016829 lyase activity 1
Pathway
R-HSA-1430728 Metabolism 2 R-HSA-5357801 Programmed Cell Death 2
Partners

Evidence

Reading pass · 9 per-paper findings extracted from the source corpus
Year Finding Method Journal Conf PMIDs
1995 Transcription of ENO3 in skeletal muscle is controlled by an intronic enhancer (nucleotides +504 to +637 of intron 1) that functions in an orientation- and position-independent manner. MEF-2 protein(s) bind an A/T-rich box within this element, and a novel ubiquitous factor(s) binds a G-rich box; mutagenesis of either box significantly reduced enhancer activity in transient-transfection assays of C2C12 myogenic cells. Deletion analysis with CAT reporter constructs in transient transfections, gel mobility shift assays, DNase I footprinting, competition analysis, and site-directed mutagenesis Molecular and cellular biology High 7565752
2021 ENO3 negatively regulates ferroptosis in NASH by elevating GPX4 expression; ENO3 overexpression attenuated ferroptosis markers and promoted lipid accumulation in L02 hepatocytes and MCD-diet mice, while loss-of-function had the opposite effect. In vivo MCD-diet NASH mouse model and in vitro HFFA-induced L02 cell model; gain- and loss-of-function of ENO3 and GPX4; Western blot, ferroptosis indicator assays, Oil Red O staining Annals of translational medicine Medium 33987359
2021 ENO3 suppresses hepatocellular carcinoma cell proliferation, migration, and invasion by inhibiting the Wnt/β-catenin signaling pathway, thereby reducing transcription of Wnt target genes associated with EMT. Gain- and loss-of-function experiments in HCC cell lines; in vitro proliferation, migration, invasion assays; in vivo xenograft; Western blot for EMT biomarkers and Wnt/β-catenin components Frontiers in cell and developmental biology Medium 35004693
2022 ENO3 promotes colorectal cancer cell proliferation and migration by enhancing glycolysis, as demonstrated by increased ATP production and lactate secretion upon ENO3 overexpression and decreased glycolytic flux upon ENO3 knockdown. Gain- and loss-of-function in CRC cell lines; RNA sequencing of DEGs enriched in glycolysis regulation; ATP and lactate production assays Medical oncology Medium 35477821
2023 NSUN5 promotes ENO3 expression and the Warburg effect in clear cell renal cell carcinoma by adding 5-methylcytosine (m5C) modifications to ENO3 mRNA, thereby stabilizing ENO3 transcripts. Western blot, qRT-PCR, immunochemistry; extracellular acidification rate, glucose uptake and lactate production assays; NSUN5 knockdown/overexpression with ENO3 readout American journal of translational research Medium 36915728
2023 miR-34a directly targets ENO3 mRNA to suppress its expression; elevated hepatic miR-34a reduces ENO3 levels, attenuates insulin signaling, and impairs glucose metabolism, causing hepatic insulin resistance in high-fat conditions. miR-34a overexpression/inhibition in hepatocytes and HFD mice; ENO3 identified as direct miR-34a target; ENO3 overexpression rescue experiments; validated in NAFLD patient liver tissue Nutrients Medium 37960269
2023 ENO3 reduces cellular iron levels and suppresses ferroptosis in colonic epithelial cells by modulating the ENO3–IRP1 (iron regulatory protein 1) axis; kumatakenin upregulates ENO3 expression to mediate this effect. Molecular docking indicated kumatakenin binds ENO3 via hydrogen bonding with residues Thr208, Val206, and Pro203. DSS colitis mouse model; RNA sequencing; qPCR; pharmacological inhibition; molecular docking Frontiers in pharmacology Low 37006994
2025 ENO3 physically interacts with PKM2 in hepatocytes; this interaction was confirmed by co-immunoprecipitation and co-localization by immunofluorescence. ENO3 silencing reduced PKM2 expression and ferroptosis markers (SLC7A11, GPX4, Fe2+, MDA) and decreased fat accumulation, whereas ENO3 overexpression promoted these effects, which were reversed by PKM2 siRNA. Co-immunoprecipitation (Co-IP), immunofluorescence co-localization, siRNA knockdown of ENO3 and PKM2, ENO3 overexpression plasmid, Western blot, Oil Red O staining, TC/TG measurements in FFA-treated THLE-2 cells and MASLD rat liver Histology and histopathology Medium 40400308
2026 CSN5 stabilizes ENO3 protein by inhibiting its ubiquitin-mediated proteasomal degradation; ENO3 in turn mediates the pro-glycolytic and anti-EMT effects of CSN5 overexpression in cervical cancer cells, as silencing ENO3 attenuated CSN5-driven oncogenic phenotypes both in vitro and in vivo. Proteomic profiling, immunohistochemistry, in vitro and in vivo functional assays; ENO3 silencing rescue of CSN5-overexpression phenotype; ubiquitination assay implied by 'stabilizing its ubiquitination degradation' Apoptosis Medium 41524948

Source papers

Stage 0 corpus · 13 papers · ranked by NIH iCite citations
Year Title Journal Citations PMID
1995 Transcription of the human beta enolase gene (ENO-3) is regulated by an intronic muscle-specific enhancer that binds myocyte-specific enhancer factor 2 proteins and ubiquitous G-rich-box binding factors. Molecular and cellular biology 47 7565752
2021 ENO3 promoted the progression of NASH by negatively regulating ferroptosis via elevation of GPX4 expression and lipid accumulation. Annals of translational medicine 43 33987359
1991 Molecular structure of the human muscle-specific enolase gene (ENO3). The Biochemical journal 41 1840492
2019 Overexpression and Selective Anticancer Efficacy of ENO3 in STK11 Mutant Lung Cancers. Molecules and cells 32 31697874
2021 ENO3 Inhibits Growth and Metastasis of Hepatocellular Carcinoma via Wnt/β-Catenin Signaling Pathway. Frontiers in cell and developmental biology 27 35004693
2008 Characterization of porcine ENO3: genomic and cDNA structure, polymorphism and expression. Genetics, selection, evolution : GSE 23 18694551
2023 Kumatakenin inhibited iron-ferroptosis in epithelial cells from colitis mice by regulating the Eno3-IRP1-axis. Frontiers in pharmacology 21 37006994
2022 ENO3 promotes colorectal cancer progression by enhancing cell glycolysis. Medical oncology (Northwood, London, England) 20 35477821
2023 MicroRNA-34a Mediates High-Fat-Induced Hepatic Insulin Resistance by Targeting ENO3. Nutrients 13 37960269
2023 A novel NSUN5/ENO3 pathway promotes the Warburg effect and cell growth in clear cell renal cell carcinoma by 5-methylcytosine-stabilized ENO3 mRNA. American journal of translational research 9 36915728
1993 Methylation patterns in the human muscle-specific enolase gene (ENO3). The Biochemical journal 1 8318001
2026 CSN5 overexpression promotes the integral progression of cervical cancer by enhancing ENO3-mediated glycolysis. Apoptosis : an international journal on programmed cell death 0 41524948
2025 ENO3 regulates ferroptosis by interaction with PKM2 to promote the progression of metabolic dysfunction-associated steatotic liver disease. Histology and histopathology 0 40400308

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