| 2002 |
DPP9 is a cytosolic serine protease belonging to the DPP IV gene family, containing a catalytic triad (Ser, Asp, His) and the GWSYG serine protease motif identical to DPP IV. It lacks transmembrane domains and a signal sequence, consistent with its cytosolic localization, and migrates at ~98 kDa on SDS-PAGE. |
In silico identification, in vitro translation, SDS-PAGE, subcellular fractionation |
Gene |
Medium |
12459266
|
| 2009 |
DPP9 is rate-limiting for degradation of proline-containing peptides in the cytoplasm. Its first identified natural substrate is the RU1(34-42) antigenic peptide (VPYGSFKHV); DPP9 degrades this peptide in vitro, and DPP9 knockdown in intact cells increases antigen presentation of RU1(34-42). |
In vitro peptidase assay with cell extracts; siRNA knockdown with antigen presentation readout |
The Journal of biological chemistry |
High |
19667070
|
| 2012 |
DPP9 binds SUMO1 (but not SUMO2) via a novel SUMO-interacting motif in an extended arm structure flanking the substrate entry site, independent of the canonical SIM. SUMO1 binding stimulates DPP9 enzymatic activity; mutations in the SUMO1-binding arm reduce DPP9 activity, and silencing SUMO1 decreases cytosolic prolyl-peptidase activity. |
Pulldown/co-IP, mutagenesis, enzymatic activity assays, siRNA knockdown |
The Journal of biological chemistry |
High |
23152501
|
| 2016 |
DPP8 and DPP9 inhibition (by Val-boroPro/Talabostat) triggers pyroptosis in monocytes and macrophages by activating pro-caspase-1 independent of the inflammasome adaptor ASC. Activated pro-caspase-1 cleaves gasdermin D to induce pyroptosis but does not efficiently process itself or IL-1β. Caspase-1 knockout mice do not show immune stimulation after Val-boroPro treatment. |
Small-molecule inhibition, genetic knockout (caspase-1 KO mice), caspase-1 activity assays, gasdermin D cleavage assay |
Nature chemical biology |
High |
27820798
|
| 2016 |
DPP9 interacts with Filamin A, which recruits DPP9 to the tyrosine kinase Syk. DPP9 cleaves Syk to expose a neo-N-terminus with serine at position 1 (N-end rule substrate), which strongly influences Syk stability. DPP9 processing is a prerequisite for Syk ubiquitination by the E3 ligase Cbl, and DPP9 inhibition stabilizes Syk and modulates B-cell signaling. |
Co-IP (DPP9-Filamin A-Syk complex), N-terminal sequencing, pulse-chase/mutagenesis, siRNA knockdown, ubiquitination assays |
eLife |
High |
27614019
|
| 2018 |
CARD8 mediates DPP8/9 inhibitor-induced pro-caspase-1-dependent pyroptosis in human myeloid cells. DPP8/9 inhibitors induce pyroptosis in the majority of human AML cell lines and primary AML samples but not in cells from many other lineages. |
Genetic knockdown/knockout, reconstituted inflammasome assays, primary patient samples, mouse xenograft models |
Nature medicine |
High |
29967349
|
| 2018 |
DPP9 directly interacts with human NLRP1 and CARD8 via their FIIND (Function-to-Find) autoproteolytic domains and acts as an endogenous inhibitor of the NLRP1 inflammasome. Both DPP9's scaffolding/binding function and its catalytic activity act synergistically to maintain NLRP1 in its inactive state. A patient-derived germline missense mutation in NLRP1's FIIND domain abrogates DPP9 binding and causes inflammasome hyperactivation. |
Proteomics screen, co-IP, CRISPR/Cas9 deletion, small-molecule inhibitors, ASC speck formation assay, IL-1β secretion, pyroptosis assays, patient mutation functional analysis |
The Journal of biological chemistry |
High |
30291141
|
| 2017 |
DPP9 enzyme activity is required for survival of migratory tongue muscle progenitors in vivo. Catalytically inactive DPP9 knock-in mice (S729A) die within 12–18 h of birth due to microglossia caused by increased apoptosis of occipital somite-derived migratory muscle progenitors forming distal tongue intrinsic muscles. |
Catalytic knock-in mouse (S729A), histology, apoptosis quantification, phenotypic rescue by manual feeding |
Developmental biology |
High |
28887018
|
| 2018 |
DPP9's enzymatic catalytic activity, but not its binding to CARD8, restrains the CARD8 inflammasome. Wild-type but not catalytically inactive DPP9 rescues CARD8-mediated cell death in DPP9 knockout cells. The DPP9-CARD8 interaction (unlike the DPP9-NLRP1 interaction) is not disrupted by DPP9 inhibitors or CARD8 mutations blocking autoproteolysis. |
Activity-based probes, reconstituted inflammasome assays, mass spectrometry-based proteomics, DPP9 knockout cell lines, catalytic mutant rescue |
ACS chemical biology |
High |
31525884
|
| 2020 |
DPP8/9 mediate N-terminal processing of adenylate kinase 2 (AK2) in the cytoplasm. DPP9-mediated processing of AK2 induces its rapid proteasomal degradation and prevents cytosolic accumulation of enzymatically active AK2. Over 100 mitochondrial proteins with putative DPP8/9 recognition sites were identified, and DPP8/9 influence cellular levels of a subset of these. |
Biochemical fractionation, DPP8/9 inhibition, proteasome inhibition, AK2 substrate validation, MS-based proteomics |
The EMBO journal |
High |
32815200
|
| 2021 |
Cryo-EM structures of human NLRP1-DPP9 complex (alone and with Val-boroPro) reveal a ternary complex comprising DPP9, full-length NLRP1, and the NLRP1 C-terminal fragment (CT). The N-terminus of NLRP1 CT inserts into the DPP9 active site; Val-boroPro disrupts this interaction. Binding of NLRP1 CT to DPP9 requires full-length NLRP1. VbP weakens the NLRP1-DPP9 interaction and accelerates degradation of the N-terminal fragment to induce inflammasome activation. |
Cryo-EM structure determination, biochemical binding assays, functional inflammasome assays, ectopic expression rescue experiments |
Nature |
High |
33731932
|
| 2021 |
Structural and biochemical analysis of rat NLRP1-DPP9 shows a 2:1 complex with one autoinhibited full-length NLRP1 and one active UPA-CARD fragment. The ZU5 domain is required for both NLRP1 autoinhibition and 2:1 complex assembly. Complex formation prevents UPA-mediated higher-order oligomerization and strengthens ZU5-mediated autoinhibition. Both NLRP1 binding and DPP9 enzymatic activity are required to suppress NLRP1 in human cells. |
Cryo-EM/crystal structure, biochemical reconstitution, structure-guided mutagenesis, functional inflammasome assays in human cells |
Nature |
High |
33731929
|
| 2018 |
Saxagliptin (but not sitagliptin) inhibits DPP9 in cardiomyocytes and impairs CaMKII phosphorylation of phospholamban and PKC activity. DPP9 knockdown (but not DPP8 knockdown) and pharmacological DPP8/9 inhibition recapitulate these effects, implicating DPP9 specifically in CaMKII-PLB and PKC signaling in cardiomyocytes. |
siRNA knockdown of DPP9 vs DPP8, pharmacological inhibition (TC-E-5007, saxagliptin, sitagliptin), CaMKII/PLB phosphorylation assays, PKC activity assays, Ca2+ transient measurements, action potential duration recording in cardiomyocytes |
Frontiers in physiology |
Medium |
30487758
|
| 2023 |
DPP9 binds KEAP1 via a conserved ESGE motif and disrupts KEAP1-NRF2 binding by competing with NRF2 for KEAP1 binding in an enzyme-independent (non-catalytic) manner. DPP9 overexpression stabilizes NRF2, drives NRF2-dependent transcription, decreases cellular ROS, suppresses ferroptosis, and induces sorafenib resistance in ccRCC cells, largely dependent on the NRF2 target SLC7A11. |
Protein affinity purification, co-IP competition assays, ESGE motif mutagenesis (enzyme-independent binding), NRF2 stability assays, ROS measurement, ferroptosis assays, drug resistance assays |
Cancer research |
Medium |
37713596
|
| 2022 |
The NLRP1 variant M1184V stabilizes the FIIND domain in a monomeric conformation, promotes DPP9 binding (confirmed by surface plasmon resonance and co-IP), and enhances formation of the autoinhibited NLRP1-DPP9 complex, leading to reduced inflammasome activation. |
Size-exclusion chromatography, molecular dynamics simulation, surface plasmon resonance, immunoprecipitation, inflammasome activity assays |
The Journal of biological chemistry |
Medium |
36309085
|
| 2023 |
In addition to Syk and AK2, BRCA2 (tumor suppressor) was identified as a DPP9 substrate; N-terminal processing of BRCA2 by DPP9 triggers its rapid proteasomal turnover, placing DPP9 as an upstream component of the N-degron pathway. |
Enzymatic assays, substrate identification (described in review/methods context referencing experimental data) |
Methods in enzymology |
Low |
37230592
|
| 2023 |
A de novo DPP9 mutation (p.Arg252Pro) destabilizes the DPP9 protein and causes it to fail to restrain the NLRP1 and CARD8 inflammasomes, resulting in constitutive inflammasome activation and severe infancy-onset autoinflammation with HLH-like features. |
Patient genetic analysis, transfection in HEK293T cells and patient iPSCs, functional inflammasome assays (caspase-1 activation, IL-1β/IL-18 secretion), protein stability assessment |
The Journal of allergy and clinical immunology |
Medium |
37544411
|
| 2020 |
FAP (Fibroblast Activation Protein) interacts intracellularly with DPP9 (identified by IP-MS), and FAP overexpression leads to reduction in DPP9 expression, promoting EMT in oral squamous cell carcinoma. DPP9 overexpression reverses FAP-induced proliferation, migration, invasion, and EMT, acting in a non-enzymatic manner. |
IP-mass spectrometry, DPP9 knockdown/overexpression, cell proliferation, migration and invasion assays, EMT marker analysis, in vivo xenograft |
OncoTargets and therapy |
Low |
32273729
|
| 2024 |
KEAP1 binds DPP9 in an inactive (non-native) conformation and stabilizes this non-dimeric fold. Reciprocally, this inactive form of DPP9 inhibits KEAP1 from binding and degrading NRF2, thereby inducing an antioxidant response. This reveals an endogenous DPP9 inhibition mechanism and links DPP9, like thioredoxin-1, to the intracellular redox potential. |
Co-IP, biochemical characterization of DPP9 conformational states, NRF2 stability assays, binding competition assays |
The Journal of biological chemistry |
Medium |
39615677
|
| 2025 |
SFTSV non-structural protein NSs activates the NLRP1 and CARD8 inflammasomes by disrupting the DPP9-mediated inhibitory ternary complex: NSs binds NLRP1 and CARD8 via their FIIND domains (competing with DPP8/9 for binding) and promotes degradation of DPP8 and DPP9, releasing activated C-terminal fragments. |
Viral infection of primary keratinocytes and macrophages, co-IP (NSs-NLRP1/CARD8 interaction), DPP9 protein level measurement, CARD8 deletion functional assay |
PLoS pathogens |
Medium |
40608794
|
| 2026 |
DPP9 interacts with the BRISC deubiquitinase complex (BRCC36/BRCC3 and ABRO1/ABRAXAS2) and CYLD-SPATA2 complex. DPP9 disrupts BRISC-SHMT2 complex formation, reducing BRISC-mediated deubiquitination and stabilization of IFNAR1, thereby suppressing JAK/STAT-driven PD-L1 transcription in ccRCC. DPP9 inhibition restores T cell cytotoxicity and enhances checkpoint blockade. |
TurboID proximity labeling, NanoBRET in living cells, pharmacological DPP9 inhibition (1G244), IFNAR1 ubiquitination assays, PD-L1 expression assays, T cell cytotoxicity assays, co-IP |
Cell death and differentiation |
Medium |
41826729
|
| 2026 |
DPP9 interactome mapped by TurboID proximity labeling reveals DPP8, the E3 ligase CBL, the deubiquitinase complex CYLD-SPATA2, and BRISC complex components (BRCC36/BRCC3, ABRO1/ABRAXAS2) as DPP9 interactors. NanoBRET assays show DPP9 disrupts BRCC36-ABRO1 binding and CYLD-SPATA2 interaction, revealing non-catalytic scaffolding functions of DPP9 in ubiquitin signaling. |
TurboID proximity labeling in DPP9-KO HEK293 cells, NanoBRET in living cells, validation co-IPs |
Cellular and molecular life sciences |
Medium |
41636814
|