| 2007 |
DND1 binds uridine-rich regions in mRNA 3'UTRs and blocks miRNA access to target sites, counteracting miRNA-mediated repression of target mRNAs in human cells and zebrafish primordial germ cells |
RNA binding assays, functional reporter assays, miRNA inhibition assays in human cells and zebrafish PGCs |
Cell |
High |
18155131
|
| 2017 |
DND1 binds a UU(A/U) trinucleotide motif in 3'UTRs of target mRNAs and destabilizes them through direct recruitment of the CCR4-NOT deadenylase complex, with suppression extent dependent on number of binding sites; target mRNAs include apoptosis regulators and pluripotency pathway modulators |
CLIP-seq, transcriptomic analysis, co-immunoprecipitation of CCR4-NOT complex, knockout mouse models with phenotypic readout |
Nature |
High |
28297718
|
| 2010 |
DND1 directly binds mRNAs encoding cell-cycle inhibitors p27(Kip1) and p21(Cip1) and promotes their translation; loss of DND1 leads to decreased p27 and p21 protein and failure of male germ cells to enter mitotic arrest (G0) |
RNA binding assays (RIP), western blot of target proteins in Dnd1(Ter/Ter) mouse germ cells, genetic epistasis with strain backgrounds |
Development |
High |
21115610
|
| 2008 |
DND1 physically interacts with mouse APOBEC3 protein; the two proteins co-localize to peri-nuclear cytoplasmic sites when co-expressed and co-immunoprecipitate from both transfected mammalian cells and mouse gonad lysates |
Co-immunoprecipitation from mammalian cells and mouse gonads, fluorescence microscopy of tagged proteins |
PloS one |
Medium |
18509452
|
| 2011 |
DND1 associates with mRNAs encoding pluripotency factors (OCT4, SOX2, NANOG, LIN28), cell cycle regulators (TP53, LATS2), and apoptotic factors (BCLX, BAX) in embryonic stem cells, as identified by ribonucleoprotein immunoprecipitation |
RIP (ribonucleoprotein immunoprecipitation) followed by RT-PCR in HA-tagged DND1-expressing human ES cells |
BMC molecular biology |
Medium |
21851623
|
| 2012 |
DND1 suppresses miR-26a-mediated inhibition of Ezh2 expression in primordial germ cells; DND1 deficiency leads to decreased H3K27me3 (via reduced Ezh2) and de-repression of Ccnd1, linking DND1 to epigenetic control of cell cycle and teratoma suppression |
miRNA reporter assays, western blot and immunostaining for H3K27me3/Ezh2 in Dnd1 mutant mouse PGCs, rescue experiments with Ezh2 and Ccnd1 |
Biology open |
Medium |
29378702
|
| 2017 |
DND1 binds to the 3'UTR of Bim mRNA at the miR-221 binding site, stabilizing Bim mRNA and antagonizing miR-221-mediated repression of Bim, thereby promoting apoptosis in breast cancer cells |
DND1 knockdown in MCF-7 cells, mRNA stability assay, 3'UTR mutation at miR-221 site, western blot |
BioMed research international |
Medium |
28191469
|
| 2017 |
DND1 binds the 3'UTR of LATS2 mRNA and elevates LATS2 stability and expression, leading to YAP phosphorylation and cytoplasmic retention, thereby activating the Hippo pathway and suppressing EMT and cancer stem cell traits in hepatocellular carcinoma cells |
RNA binding assay (3'UTR binding), western blot for LATS2/YAP pathway, DND1 knockdown/overexpression functional assays in HCC cells |
Biotechnology letters |
Medium |
28593479
|
| 2019 |
CRISPR base-editing screen identified four DND1 missense mutations that completely deplete primordial germ cells in mice by disrupting DND1 protein stability and protein-protein interactions |
CRISPR-Cas9 base-editing in mice, PGC counting, protein stability and interaction assays |
Nature cell biology |
High |
30275529
|
| 2019 |
DND1 controls downregulation of pluripotency/cell cycle genes (including mTor, Hippo, Bmp/Nodal pathway elements) and also targets chromatin regulators that are activated during male germ cell differentiation; DND1 functions sequentially as a negative regulator of pluripotency and a positive regulator of epigenetic modifiers |
DO-RIP-Seq to identify direct targets, transcriptome sequencing of Dnd1 mutant male germ cells at E12.5-E14.5 |
Development |
High |
31253634
|
| 2021 |
Crystal structure of human DND1-RRM2 domain at 2.3 Å reveals a non-canonical RRM fold maintained by 3D domain-swapped dimerization between β1 and β4 strands across protomers; NMR and MD simulations delineated molecular basis of dimer stability |
X-ray crystallography, NMR spectroscopy, molecular dynamics simulations |
Protein science |
High |
33860980
|
| 2022 |
NANOS2 interacts with RNA-bound DND1 and recruits the CNOT deadenylase complex to target mRNAs; NANOS2 is required not only for CNOT recruitment but also for target mRNA selection in cooperation with DND1 — a fusion of the CNOT1-binding NANOS2 domain with DND1 alone fails to repress targets |
Co-immunoprecipitation, somatic cell reporter system for NANOS2-DND1 function, domain fusion/deletion constructs, mRNA repression assays |
Cell reports |
High |
35705038
|
| 2023 |
In zebrafish germ granules, DND1 is essential for localizing nanos3 RNA to the periphery of phase-separated condensates where ribosomes are present; in the absence of DND1, nanos3 RNA translocates to the granule interior away from ribosomes, correlating with loss of germ cell fate |
3D in vivo structural analysis of germ granules, live imaging, translational inhibition experiments, Dnd1 loss-of-function in zebrafish |
Developmental cell |
High |
37463577
|
| 2023 |
DND1 targets during male germ cell G0 arrest include DNA methyltransferases (Dnmts), histone deacetylases (Hdacs), Tudor domain proteins, actin-dependent regulators (Smarcs), and ribosomal/Golgi proteins, as identified by RIP-sequencing from knock-in DND1-GFP mice; a subpopulation of pro-spermatogonia expresses elevated DND1 |
Knock-in DND1-GFP mouse line, RIP-sequencing with anti-GFP antibodies, RNA-seq time course, flow cytometry cell sorting |
PLoS genetics |
High |
36857387
|
| 2025 |
DND1 forms a complex with NANOS3 that recognizes an AUGAAUU heptanucleotide motif (N3-DRE) in target mRNA 3'UTRs; crystal structure at 1.7 Å of the ternary DND1-NANOS3-RNA complex reveals a continuous RNA-binding surface enabling high-affinity sequence-specific recognition; N3-DRE-containing mRNAs including CDK1 are upregulated in DND1- or NANOS3-deficient germ cells, and genome editing of the N3-DRE in Cdk1 abolishes its repression in mouse PGCs in vivo |
Tandem PAR-CLIP, 1.7-Å crystal structure of ternary complex, in vivo genome editing of N3-DRE element, transcriptomics of mutant germ cells |
bioRxivpreprint |
High |
41040373
|
| 2025 |
DND1 forms a complex with NANOS3 to suppress translation of SOX4 mRNAs in processing bodies (P-bodies), with NANOS3 mediating the interaction between DND1 and the translational repressor 4E-T; this DND1-NANOS3 complex acts as a 'braking system' restricting primordial germ cell specification in humans |
Co-immunoprecipitation of DND1-NANOS3-4E-T complex, RIP analysis of bound mRNAs, P-body localization imaging, DND1/NANOS3 loss-of-function in human PGC-like cells, SOX4 reporter assays |
Nature communications |
High |
40410171
|
| 2015 |
DND1 and RBM38 stabilize p21(CIP1) mRNA in AML cells; knockdown of DND1 in NB4 APL cells significantly attenuates neutrophil differentiation and decreases p21(CIP1) mRNA expression |
shRNA knockdown in NB4 cells, qRT-PCR of p21(CIP1), differentiation assays |
Leukemia research |
Medium |
26740055
|
| 2024 |
DND1 negatively regulates CLIC4 mRNA levels in prostate cancer cells; DND1 protein binds CLIC4 mRNA, and DND1 silencing increases CLIC4 expression while suppressing proliferation, migration, invasion, and EMT |
Bioinformatic prediction of DND1-CLIC4 mRNA interaction, western blot and qRT-PCR after DND1 knockdown, rescue experiments with CLIC4 depletion |
Histology and histopathology |
Low |
38390782
|
| 2024 |
circFCHO2 directly binds DND1 protein in melanoma cells, sequestering DND1 and reversing its inhibition of the PI3K/AKT signaling pathway, thereby promoting melanoma cell proliferation, migration, and invasion |
FISH, RNA pulldown, RIP, western blotting for PI3K/AKT pathway markers, functional assays with circFCHO2 overexpression and DND1 binding |
Cell biology and toxicology |
Medium |
38311675
|