Affinage

CRIP2

Cysteine-rich protein 2 · UniProt P52943

Length
208 aa
Mass
22.5 kDa
Annotated
2026-06-09
12 papers in source corpus 12 papers cited in narrative 12 extracted findings
Cross-family judge faithfulness: 6/6 claims corpus-supported (100%)

Mechanistic narrative

Synthesis pass · prose summary of the discoveries below

CRIP2 is a nuclear LIM-domain protein that functions principally as a transcriptional repressor restraining angiogenic and metabolic programs in cancer (PMID:21540330, PMID:29662084). It physically interacts with NF-κB/p65 and blocks its DNA binding at the promoters of proangiogenic cytokines IL6, IL8, and VEGF, thereby suppressing tumorigenesis and angiogenesis (PMID:21540330). In a parallel repressive role, CRIP2 cooperates with HOXA9 at glycolytic gene promoters (HK2, GLUT1, PDK1) to impede HIF-1α binding and dampen glycolytic gene expression, situating it within a miR-365–HOXA9–HIF-1α axis (PMID:29662084). CRIP2 is also a nuclear copper-binding protein that receives copper from the chaperone Atox1; copper loading drives a conformational change and ubiquitin-mediated proteasomal degradation of CRIP2, and its loss elevates ROS and activates autophagy, identifying CRIP2 as an autophagy suppressor (PMID:34550632). In developmental settings, CRIP2 represses Notch signaling through NF-κB to permit hematopoietic stem/progenitor cell emergence from hemogenic endothelium (PMID:41601327) and represses ECM gene expression (versican a, has2) during atrioventricular valve formation (PMID:24823359). In endothelial cells it additionally interacts with cytoskeletal proteins KRT8 and VIM and supports migration and proliferation through VEGFA/CDC42 and SRF-linked signaling (PMID:40074973).

Mechanistic history

Synthesis pass · year-by-year structured walk · 11 steps
  1. 2011 High

    Established CRIP2's core molecular function: how a LIM-domain protein could suppress tumors was unknown, and this work showed it acts as a transcriptional repressor of NF-κB/p65 at proangiogenic cytokine promoters.

    Evidence Microcell-mediated chromosome transfer, reciprocal Co-IP, ChIP at IL6/IL8/VEGF promoters, and in vivo tumor suppression assays in cancer cell lines

    PMID:21540330

    Open questions at the time
    • Structural basis of the CRIP2–p65 interaction not defined
    • Whether repression generalizes beyond the named cytokine promoters not established
  2. 2011 Medium

    Tested where CRIP2 acts and its cellular consequence; demonstrated nuclear localization in esophageal carcinoma and that overexpression triggers caspase-3/9-dependent apoptosis.

    Evidence Subcellular fractionation and Western blot for active caspases with CRIP2 overexpression in ESCC cells

    PMID:22154084

    Open questions at the time
    • Direct transcriptional targets driving apoptosis not identified
    • Link between nuclear repressor activity and caspase activation not mechanistically connected
  3. 2011 Low

    Probed a non-nuclear role; in mouse cardiomyocytes Crip2 colocalizes with cardiac troponin T at sarcomeric thin filaments, hinting at a structural function distinct from transcriptional repression.

    Evidence Immunofluorescence co-localization in mouse heart sections

    PMID:21601656

    Open questions at the time
    • Co-localization only, no functional perturbation
    • No biochemical evidence of direct sarcomeric binding
  4. 2014 Medium

    Asked what CRIP2 does in cardiac development; loss-of-function in zebrafish showed it represses ECM genes (versican a, has2) in AV canal endocardium required for valve formation, without affecting bmp4/tbx2b/notch1b.

    Evidence Morpholino knockdown, in situ hybridization, and heart-looping phenotype analysis in zebrafish

    PMID:24823359

    Open questions at the time
    • Direct binding of CRIP2 at ECM gene promoters not shown
    • Transcriptional partners in endocardium not identified
  5. 2016 Medium

    Placed CRIP2 within an upstream regulatory circuit; showed miR-449a directly suppresses CRIP2 and that restoring CRIP2 reduces breast cancer growth and angiogenesis via NF-κB/p65-mediated VEGF transcription.

    Evidence Luciferase 3'UTR reporter, stable CRIP2 transfection, and mouse xenograft growth/angiogenesis assays

    PMID:26934316

    Open questions at the time
    • NF-κB/VEGF mechanism inferred without ChIP in this study
    • Other miR-449a targets contributing to phenotype not excluded
  6. 2018 High

    Extended CRIP2 repressor function to metabolism; demonstrated it cooperates with HOXA9 at glycolytic promoters to exclude HIF-1α, defining a miR-365–HOXA9–HIF-1α axis controlling glycolytic reprogramming.

    Evidence Reciprocal Co-IP, ChIP at HK2/GLUT1/PDK1 promoters, luciferase reporters, and in vivo glycolysis assays

    PMID:29662084

    Open questions at the time
    • Whether CRIP2 directly contacts HIF-1α or only competes via HOXA9 not resolved
    • Stoichiometry of the CRIP2–HOXA9 complex unknown
  7. 2021 High

    Revealed a metal-sensing dimension; APEX2 proximity labeling and biochemistry showed CRIP2 binds copper received from Atox1, undergoes conformational change and proteasomal degradation, and acts to suppress ROS and autophagy.

    Evidence APEX2 proximity labeling with MS, Co-IP, circular dichroism, proteasome inhibition, ROS measurement, and autophagy flux assays

    PMID:34550632

    Open questions at the time
    • Copper-binding residues and the responsible E3 ligase not identified
    • Mechanistic link between CRIP2 degradation and autophagy induction undefined
  8. 2025 Medium

    Characterized CRIP2 in endothelial cell biology; Co-IP and zebrafish loss-of-function tied it to cytoskeletal proteins KRT8/VIM and to VEGFA/CDC42 and SRF-linked migration and proliferation signaling.

    Evidence Co-IP in HUVECs, zebrafish crip2 loss-of-function, Western blot for pathway components, and adhesion/migration/proliferation assays

    PMID:40074973

    Open questions at the time
    • Direct versus indirect nature of multiple signaling effects not separated
    • Whether cytoskeletal interactions are nuclear or cytoplasmic not resolved
  9. 2025 Low

    Positioned CRIP2 downstream of MAP2K4 in breast cancer; overexpression studies showed CRIP2 inhibits p65 phosphorylation and reverses MAP2K4-driven malignant phenotypes.

    Evidence Western blot for p-p65 and CCK-8/EdU/Transwell assays with MAP2K4 and CRIP2 overexpression in TNBC cells

    PMID:41210648

    Open questions at the time
    • MAP2K4–CRIP2 link based on expression changes without direct binding evidence
    • Mechanism of CRIP2-mediated p65 dephosphorylation not defined
  10. 2025 Low

    Implicated CRIP2 in therapy response; knockdown sensitized prostate cancer cells to the PARP inhibitor olaparib, identifying it as a mediator of drug resistance.

    Evidence In vitro cell viability drug-sensitivity assays after CRIP2 knockdown in LNCaP and C4-2B cells

    PMID:41132344

    Open questions at the time
    • No mechanistic pathway linking CRIP2 to olaparib resistance delineated
    • Not validated in vivo
  11. 2026 High

    Defined a developmental hematopoietic role; CRISPR loss-of-function and epistasis showed Crip2 (with Crip3) is required for HSPC emergence by repressing Notch through NF-κB, with Notch inhibition rescuing the defect.

    Evidence Zebrafish CRISPR alleles, single-cell RNA-seq of endothelial cells, and pharmacological Notch-inhibitor rescue/epistasis

    PMID:41601327

    Open questions at the time
    • Direct molecular target of CRIP2 within the NF-κB–Notch axis not identified
    • Functional redundancy with Crip3 not fully dissected

Open questions

Synthesis pass · forward-looking unresolved questions
  • How CRIP2's nuclear transcriptional repressor activity, copper-sensing/degradation, and cytoplasmic cytoskeletal roles are integrated into a single regulatory logic remains unresolved.
  • No structure of CRIP2 bound to p65 or HOXA9
  • E3 ligase and copper-binding residues unidentified
  • Whether copper-dependent degradation modulates its transcriptional repressor output untested

Mechanism profile

Synthesis pass · controlled-vocabulary classification · explore literature graph →
Molecular activity
GO:0140110 transcription regulator activity 3 GO:0098772 molecular function regulator activity 2 GO:0140104 molecular carrier activity 1
Localization
GO:0005634 nucleus 4 GO:0005829 cytosol 1
Pathway
R-HSA-162582 Signal Transduction 3 R-HSA-1266738 Developmental Biology 2 R-HSA-74160 Gene expression (Transcription) 2 R-HSA-9612973 Autophagy 1

Evidence

Reading pass · 12 per-paper findings extracted from the source corpus
Year Finding Method Journal Conf PMIDs
2011 CRIP2 acts as a transcription repressor by interacting with NF-κB/p65 to inhibit its DNA-binding ability at promoter regions of proangiogenic cytokines IL6, IL8, and VEGF, thereby suppressing tumorigenesis and angiogenesis. Microcell-mediated chromosome transfer, functional complementation, co-immunoprecipitation, chromatin immunoprecipitation, in vivo tumor suppression assays Proceedings of the National Academy of Sciences of the United States of America High 21540330
2018 CRIP2 interacts with HOXA9 at glycolytic gene promoters (HK2, GLUT1, PDK1) to impede HIF-1α binding and repress glycolytic gene expression, placing CRIP2 downstream of HOXA9 in a miR-365-HOXA9-HIF-1α regulatory axis. Co-immunoprecipitation, chromatin immunoprecipitation, luciferase reporter assays, in vitro and in vivo glycolysis assays, loss/gain-of-function experiments Nature communications High 29662084
2021 CRIP2 is a nuclear copper-binding protein that receives copper from the chaperone Atox1; copper transfer induces a conformational change in CRIP2's secondary structure, promoting its ubiquitin-mediated proteasomal degradation. CRIP2 depletion (or copper-induced CRIP2 degradation) elevates ROS and activates autophagy, establishing CRIP2 as an autophagic suppressor. APEX2-based proximity labeling combined with mass spectrometry, co-immunoprecipitation, circular dichroism/secondary structure analysis, proteasome inhibitor experiments, ROS measurement, autophagy flux assays Angewandte Chemie (International ed. in English) High 34550632
2011 CRIP2 is localized to the nucleus in esophageal squamous cell carcinoma cells, and its overexpression induces apoptosis via activation of caspases 3 and 9. Subcellular fractionation, Western blot for active caspases, colony formation and invasion assays with CRIP2 overexpression Cancer letters Medium 22154084
2011 In mouse cardiomyocytes, Crip2 colocalizes with cardiac troponin T in the thin filaments of sarcomeres, suggesting a structural/organizational role at the sarcomere. Immunofluorescence co-localization in mouse heart sections Gene expression patterns : GEP Low 21601656
2014 Zebrafish Crip2 is required in AV canal endocardial cells for atrioventricular valve development; its loss leads to upregulation of ECM genes versican a and has2 without affecting bmp4, tbx2b, or notch1b expression, placing Crip2 as a repressor of ECM gene expression in the endocardial cushion. Morpholino knockdown in zebrafish, in situ hybridization for ECM and signaling gene expression, heart-looping phenotype analysis Molecules and cells Medium 24823359
2025 CRIP2 interacts with cytoskeleton proteins KRT8 and VIM in endothelial cells; its loss reduces their expression, causing hyperadhesion and impaired cytoskeleton formation. CRIP2 deficiency also disrupts the VEGFA/CDC42 signaling pathway (reducing migration) and impairs proliferation via interaction with SRF through PDE10A/cAMP and PDGF/JAK/STAT/SRF signaling. Co-immunoprecipitation in HUVECs, zebrafish crip2 loss-of-function, Western blot for KRT8/VIM/CDC42/SRF pathway components, cell adhesion/migration/proliferation assays Cellular and molecular life sciences : CMLS Medium 40074973
2026 In zebrafish, Crip2 (with Crip3) is required for HSPC emergence from hemogenic endothelium; loss of Crip2/Crip3 causes failure to repress Notch signaling during HE-to-HSPC transition. Epistasis experiments show Crip genes operate through NF-κB to limit Notch, and pharmacological Notch inhibition rescues HSPC production in crip2/crip3 double mutants. CRISPR loss-of-function alleles in zebrafish, single-cell RNA-sequencing of endothelial cells, Notch inhibitor rescue experiments, epistasis analysis Development (Cambridge, England) High 41601327
2009 In undifferentiated rat olfactory precursor cells, CRIP2 is predominantly localized to the cytoplasm (whereas CRP2 is both nuclear and cytoplasmic); upon differentiation into end cells, only CRIP2 expression is retained. Western blot and immunofluorescence with specific polyclonal antibodies in olfactory precursor cells Biochemistry. Biokhimiia Low 19364329
2016 miR-449a directly targets and suppresses CRIP2; CRIP2 overexpression in MDA-MB-231 cells reduces cell viability, migration, invasion, tumor growth, and angiogenesis, with evidence that it acts via inhibiting NF-κB/p65-mediated VEGF transcription. Luciferase reporter assay for miR-449a targeting of CRIP2 3'UTR, stable CRIP2 transfection, mouse xenograft tumor growth/angiogenesis assays Oncotarget Medium 26934316
2025 CRIP2 upregulation in MDA-MB-231 TNBC cells inhibits phosphorylation of p65 (NF-κB), and overexpression of MAP2K4 downregulates CRIP2 expression while promoting malignant phenotypes that are reversed by CRIP2 re-expression, placing CRIP2 downstream of MAP2K4 in an NF-κB regulatory axis. Western blot for p-p65, CCK-8/EdU/Transwell assays, gain-of-function overexpression experiments with MAP2K4 and CRIP2 Translational breast cancer research Low 41210648
2025 CRIP2 knockdown significantly increases the sensitivity of LNCaP and C4-2B prostate cancer cells to the PARP inhibitor olaparib, establishing CRIP2 as a mediator of olaparib resistance. In vitro drug sensitivity assays (cell viability) following CRIP2 knockdown in prostate cancer cell lines Translational andrology and urology Low 41132344

Source papers

Stage 0 corpus · 12 papers · ranked by NIH iCite citations
Year Title Journal Citations PMID
2018 HOXA9 inhibits HIF-1α-mediated glycolysis through interacting with CRIP2 to repress cutaneous squamous cell carcinoma development. Nature communications 119 29662084
2011 Cysteine-rich intestinal protein 2 (CRIP2) acts as a repressor of NF-kappaB-mediated proangiogenic cytokine transcription to suppress tumorigenesis and angiogenesis. Proceedings of the National Academy of Sciences of the United States of America 72 21540330
2021 APEX2-based Proximity Labeling of Atox1 Identifies CRIP2 as a Nuclear Copper-binding Protein that Regulates Autophagy Activation. Angewandte Chemie (International ed. in English) 66 34550632
2016 MiR-449a promotes breast cancer progression by targeting CRIP2. Oncotarget 53 26934316
2011 Expression of Crip2, a LIM-domain-only protein, in the mouse cardiovascular system under physiological and pathological conditions. Gene expression patterns : GEP 27 21601656
2011 The LIM domain protein, CRIP2, promotes apoptosis in esophageal squamous cell carcinoma. Cancer letters 21 22154084
2014 Zebrafish Crip2 plays a critical role in atrioventricular valve development by downregulating the expression of ECM genes in the endocardial cushion. Molecules and cells 13 24823359
2025 Crip2 affects vascular development by fine-tuning endothelial cell aggregation and proliferation. Cellular and molecular life sciences : CMLS 4 40074973
2026 Crip2 preserves hematopoietic stem and progenitor cell production through inhibition of Notch signals. Development (Cambridge, England) 1 41601327
2009 Polyclonal antibodies to LIM proteins CRP2 and CRIP2 reveal their subcellular localizations in olfactory precursor cells. Biochemistry. Biokhimiia 1 19364329
2025 Omics integration identified CRIP2 as a key mediator of olaparib resistance in prostate cancer. Translational andrology and urology 0 41132344
2025 The impact and mechanisms of CRIP2 on the biological behavior of triple-negative breast cancer cells. Translational breast cancer research : a journal focusing on translational research in breast cancer 0 41210648

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