Affinage

CPLANE2

Ciliogenesis and planar polarity effector 2 · UniProt Q9BU20

Length
258 aa
Mass
28.5 kDa
Annotated
2026-04-28
31 papers in source corpus 9 papers cited in narrative 8 extracted findings

Mechanistic narrative

Synthesis pass · prose summary of the discoveries below

CPLANE2 (RSG1) is a small GTPase that functions as a core component of the CPLANE ciliogenesis complex, governing basal body maturation, intraflagellar transport (IFT) protein recruitment, and axonemal microtubule elongation during cilia initiation. It localizes to the mother centriole in a manner dependent on TTBK2, the CPLANE subunit INTU, and its own GTPase activity, and it binds the CPLANE complex components (INTU, FUZ, WDPCP, JBTS17) and the transition zone protein FAM92 in a GTP-dependent manner (PMID:29038301, PMID:40593758). A point mutation in the RSG1 GTP-binding pocket specifically blocks axonemal elongation without disrupting basal body docking or IFT protein localization, establishing that GTPase activity is required for a discrete downstream step after basal body maturation (PMID:38721990). Loss-of-function variants in CPLANE2 cause Oral-Facial-Digital Syndrome, a ciliopathy, with disease-associated mutations disrupting basal body docking and IFT recruitment (PMID:40593758, PMID:41952398).

Mechanistic history

Synthesis pass · year-by-year structured walk · 6 steps
  1. 2013 Medium

    Establishing that RSG1 is required for ciliogenesis answered whether this uncharacterized small GTPase has a ciliary role, revealing its necessity for basal body apical trafficking, IFT dynamics, and cytoplasmic localization of the retrograde IFT-A protein IFT43.

    Evidence Morpholino knockdown in Xenopus multiciliated cells with live IFT imaging and basal body immunofluorescence

    PMID:24192041

    Open questions at the time
    • Morpholino-based knockdown requires genetic confirmation
    • Whether RSG1 GTPase activity is required was not tested
    • Mechanism linking RSG1 to IFT-A localization not defined
  2. 2017 High

    Demonstrating that RSG1 localizes to the mother centriole and is required for a final maturation step enabling axonemal elongation resolved its site of action and placed it in a genetic pathway downstream of TTBK2 and INTU.

    Evidence Mouse Rsg1 knockout embryos with live imaging, immunofluorescence, and epistasis analysis with TTBK2 and INTU

    PMID:29038301

    Open questions at the time
    • Biochemical GTPase activity not directly measured
    • Direct physical interactions with CPLANE subunits not demonstrated
    • Whether the centriolar localization defect is the proximate cause of axonemal failure was not resolved
  3. 2024 Medium

    A G1-domain point mutation that disrupts axonemal elongation without affecting basal body docking or IFT protein recruitment to the basal body demonstrated that RSG1 GTPase activity is specifically required for a post-docking step, separating its GTP-dependent function from its scaffolding role.

    Evidence Forward genetic screen in mouse; point mutation mapping with immunofluorescence of centrosomal and IFT proteins

    PMID:38721990

    Open questions at the time
    • In vitro GTPase activity and GTP/GDP binding kinetics not measured biochemically
    • Identity of the effector engaged by GTP-bound RSG1 at the basal body remains unknown
    • Single lab finding
  4. 2024 Low

    Identification of patient variants in CPLANE2 causing Oral-Facial-Digital Syndrome established a direct human disease link, though the structural basis of pathogenicity relied on in silico modeling.

    Evidence Patient variant identification with in silico 3D structural modeling of FUZ–RSG1 interaction

    PMID:41952398

    Open questions at the time
    • No in vitro or cell-based validation of the predicted FUZ–RSG1 interaction disruption
    • Genotype-phenotype correlation not established across a patient cohort
    • Functional rescue experiments not performed
  5. 2025 High

    APMS demonstrated that RSG1 binds the CPLANE complex and the transition zone protein FAM92 in a GTP-dependent manner, and that disease-causing variants disrupt basal body docking and IFT recruitment, unifying the GTPase-dependent interaction network with ciliopathy pathogenesis.

    Evidence Affinity purification mass spectrometry with GTP-dependence controls, patient-derived variant functional analysis, ciliogenesis assays

    PMID:40593758

    Open questions at the time
    • Direct structural basis of GTP-dependent FAM92 binding not resolved
    • Whether RSG1 acts catalytically (multiple GTP cycles) or as a molecular switch remains untested
    • Downstream effectors linking RSG1–FAM92 binding to axonemal elongation not identified
  6. 2025 Medium

    Demonstration that folic acid-regulated reactive oxygen species modulate RSG1 GTPase activity and ciliogenesis connected a metabolic/environmental input to RSG1-dependent cilia formation, expanding the regulatory context.

    Evidence Mouse neural tube defect models with Rsg1 mutation, ROS measurements, and cilia formation assays under varying folic acid levels

    PMID:39755226

    Open questions at the time
    • Direct biochemical demonstration of ROS-mediated RSG1 GTPase modulation not shown
    • Relevant cysteine residues or redox-sensitive sites on RSG1 not identified
    • Specificity of the ROS effect to RSG1 versus other GTPases not established

Open questions

Synthesis pass · forward-looking unresolved questions
  • The identity of the downstream effector(s) through which GTP-bound RSG1 drives axonemal elongation after basal body docking, and whether RSG1 functions as a canonical molecular switch or has additional catalytic roles, remain unresolved.
  • No effector protein identified downstream of GTP-bound RSG1
  • No in vitro GTPase kinetics or structural data for RSG1
  • Mechanism by which transition zone architecture depends on CPLANE/RSG1 is undefined

Mechanism profile

Synthesis pass · controlled-vocabulary classification · explore literature graph →
Molecular activity
GO:0003924 GTPase activity 3
Localization
GO:0005815 microtubule organizing center 2 GO:0005929 cilium 2
Pathway
R-HSA-1852241 Organelle biogenesis and maintenance 4
Complex memberships
CPLANE complex

Evidence

Reading pass · 8 per-paper findings extracted from the source corpus
Year Finding Method Journal Conf PMIDs
2017 RSG1 (CPLANE2) is a small GTPase that localizes to the mother centriole and is required for a final maturation step enabling axonemal microtubule elongation during cilia initiation; its centriolar localization depends on TTBK2, the CPLANE complex protein Inturned (INTU), and its own GTPase activity. Mouse knockout embryos, live imaging, immunofluorescence localization, genetic epistasis with TTBK2 and INTU The Journal of cell biology High 29038301
2013 Rsg1 (CPLANE2) is required for apical trafficking/localization of basal bodies, axonemal intraflagellar transport (IFT) dynamics in multiciliated cells, and cytoplasmic localization of the retrograde IFT-A protein IFT43. Xenopus loss-of-function (morpholino knockdown), live imaging of IFT dynamics, immunofluorescence of basal body positioning Cilia Medium 24192041
2025 RSG1 (CPLANE2) binds the CPLANE complex and the transition zone protein FAM92 in a GTP-dependent manner, as revealed by affinity purification mass spectrometry (APMS); disease-causing variants disrupt basal body docking and IFT protein recruitment; CPLANE is required for normal transition zone architecture. APMS (affinity purification mass spectrometry), patient-derived variant functional analysis, ciliogenesis assays (basal body docking, IFT recruitment) Nature communications High 40593758
2024 A point mutation in the GTP-binding pocket (G1 domain) of RSG1 (CPLANE2) disrupts axonemal elongation without affecting basal body maturation or localization of RSG1 or other centrosomal/IFT proteins to the basal body, indicating that RSG1 GTPase activity is specifically required for a downstream step after basal body docking. Forward genetic screen in mouse, point mutation mapping, immunofluorescence of centrosomal/IFT protein localization Genesis (New York, N.Y. : 2000) Medium 38721990
2025 Folic acid-regulated reactive oxygen species (ROS) modulate ROS-sensitive GTPase activity of RSG1 required for ciliogenesis; moderate folic acid levels preserve RSG1 GTPase activity and cilia formation, while high fortified FA levels reduce basal ROS and impair RSG1-dependent ciliogenesis. Mouse NTD models with Rsg1 mutation, ROS measurement, cilia formation assays under varying folic acid supplementation Developmental biology Medium 39755226
2024 Patient variants in CPLANE2/RSG1 cause Oral-Facial-Digital Syndrome ciliopathy; in silico structural analysis predicts that the FUZ variant p.Arg186His alters interactions between FUZ and CPLANE2/RSG1, potentially disrupting ciliogenesis. Patient variant identification, in silico 3D structural modeling of FUZ–RSG1 interaction Clinical genetics Low 41952398
2022 The CPLANE complex, composed of INTU, FUZ, WDPCP (which bind JBTS17 and RSG1/CPLANE2), is required for intraflagellar transport and planar cell polarity; bioinformatic analysis identifies INTU/FUZ as a novel member of HerMon (Hermansky-Pudlak/MON1-CCZ1) complexes with triplication of Longin domains, suggesting INTU/FUZ acts as a GEF for Rab GTPases during ciliogenesis, with RSG1 as a binding partner. Evolutionary coevolution-based contact prediction and sequence conservation analysis; review/bioinformatics Biomolecules Low 31562761 35740972
2024 RSG1 binds the CPLANE complex (INTU, FUZ, WDPCP, JBTS17) and the transition zone protein FAM92 in a GTP-dependent manner (preprint version of the published Nature Communications paper). APMS, GTP-dependence assay bioRxivpreprint High 39386566

Source papers

Stage 0 corpus · 31 papers · ranked by NIH iCite citations
Year Title Journal Citations PMID
2003 Placental cell expression of HLA-G2 isoforms is limited to the invasive trophoblast phenotype. Journal of immunology (Baltimore, Md. : 1950) 89 14634138
1997 Molding a peptide into an RNA site by in vivo peptide evolution. Proceedings of the National Academy of Sciences of the United States of America 53 9342332
2017 The small GTPase RSG1 controls a final step in primary cilia initiation. The Journal of cell biology 29 29038301
2001 Structural characterization of the complex of the Rev response element RNA with a selected peptide. Chemistry & biology 26 11358697
1988 A new family of repetitive, retroposon-like sequences in the genome of the rainbow trout. European journal of biochemistry 26 2843369
2005 Evolvability of the mode of peptide binding by an RNA. RNA (New York, N.Y.) 24 16043495
2013 The Small GTPase Rsg1 is important for the cytoplasmic localization and axonemal dynamics of intraflagellar transport proteins. Cilia 19 24192041
2022 CPLANE Complex and Ciliopathies. Biomolecules 15 35740972
2020 Hexa-Longin domain scaffolds for inter-Rab signalling. Bioinformatics (Oxford, England) 13 31562761
2011 Specificity of RSG-1.2 peptide binding to RRE-IIB RNA element of HIV-1 over Rev peptide is mainly enthalpic in origin. PloS one 11 21853108
2020 Improved Detection of Potentially Pleiotropic Genes in Coronary Artery Disease and Chronic Kidney Disease Using GWAS Summary Statistics. Frontiers in genetics 8 33343632
2023 Integrated Microbiota and Metabolome Analysis to Assess the Effects of the Solid-State Fermentation of Corn-Soybean Meal Feed Using Compound Strains. Microorganisms 7 37317292
2002 Displacement of Mn2+ from RNA by K+, Mg2+, neomycin B, and an arginine-rich peptide: indirect detection of nucleic acid/ligand interactions using phosphorus relaxation enhancement. Journal of the American Chemical Society 7 12475335
1980 Necator americanus in infant rabbits: complete development, humoral antibody, leukocyte response and serum protein changes following infection. Journal of helminthology 7 7410812
2022 Role of Mutations in Differential Recognition of Viral RNA Molecules by Peptides. Journal of chemical information and modeling 6 35833626
2022 Characterization of Rsg3, a novel greenbug resistance gene from the Chinese barley landrace PI 565676. The plant genome 6 36479942
2025 The human ciliopathy protein RSG1 links the CPLANE complex to transition zone architecture. Nature communications 4 40593758
2024 RSG1 is required for cilia-dependent neural tube closure. Genesis (New York, N.Y. : 2000) 3 38721990
2020 Probing the mechanism of peptide binding to REV response element RNA of HIV-1; MD simulations and free energy calculations. Journal of biomolecular structure & dynamics 3 33323039
2008 Tailoring the peptide-binding specificity of an RNA by combinations of specificity-altering mutations. Nucleosides, nucleotides & nucleic acids 3 18569791
1998 Inheritance of Complete Resistance to Pearl Millet Downy Mildew. Plant disease 3 30856952
1987 Physical map of the Rhodobacter sphaeroides bacteriophage phi RsG1 genome and location of the prophage on the host chromosome. Journal of bacteriology 3 3040695
2025 Moderate levels of folic acid benefit outcomes for cilia based neural tube defects. Developmental biology 2 39755226
2023 Genetic Diversity of Barley Accessions from East Asia for Greenbug Resistance. Plants (Basel, Switzerland) 2 38005694
2023 Identification of a new Rsg1 allele conferring resistance to multiple greenbug biotypes from barley accessions PI 499276 and PI 566459. The plant genome 2 38093595
2008 Manipulation of the peptide-binding specificity of an RNA in a rational manner by combinations of specificity-altering mutations. Nucleic acids symposium series (2004) 2 18776229
2003 The variability of the peptide-binding specificity of RNA. Nucleic acids research. Supplement (2001) 2 14510450
2024 The human ciliopathy protein RSG1 links the CPLANE complex to transition zone architecture. bioRxiv : the preprint server for biology 1 39386566
2024 Characterization of a new barley greenbug resistance gene Rsg4 in the Chinese landrace CI 2458. The plant genome 1 39510979
2026 Phenotypic Expansion and Molecular Implications in Recessive FUZ-Related Ciliopathy. Clinical genetics 0 41952398
1999 In vivo selection of RNA-binding peptides from combinatorial libraries. Nucleic acids symposium series 0 10780455