Affinage

CENPS

Centromere protein S · UniProt Q8N2Z9

Length
138 aa
Mass
15.9 kDa
Annotated
2026-04-28
21 papers in source corpus 8 papers cited in narrative 8 extracted findings

Mechanistic narrative

Synthesis pass · prose summary of the discoveries below

CENP-S (also known as MHF1/APITD1) is a histone-fold protein that heterodimerizes with CENP-X to serve separable roles in kinetochore integrity and DNA damage repair. At centromeres, the CENP-S–CENP-X complex assembles de novo during S/G2 phase in a CENP-T- and CENP-K-dependent manner, where it stabilizes the outer kinetochore plate, maintains proper intrakinetochore distance, promotes kinetochore localization of other CCAN components, and supports spindle assembly checkpoint signaling (PMID:19620631, PMID:24522885, PMID:36537249). In the Fanconi anemia pathway, the (MHF1–MHF2)₄ octamer binds double-stranded DNA through a positively charged surface patch, enhances FANCM branch migration activity, and is required for FANCD2 monoubiquitination and interstrand cross-link repair—functions that depend on direct interaction with FANCM, unlike the centromere role (PMID:20347429, PMID:23886707, PMID:24026537). CENP-S and CENP-X are also recruited to DNA double-strand breaks within ~100 seconds of damage induction across cell cycle phases, placing them at lesions during early chromatin remodeling associated with repair pathway choice (PMID:40450933).

Mechanistic history

Synthesis pass · year-by-year structured walk · 7 steps
  1. 2009 High

    Establishing that CENP-S and CENP-X form a kinetochore subcomplex whose loss reduces outer kinetochore plate size and increases intrakinetochore distance answered whether the inner centromere had additional histone-fold components required for stable outer kinetochore assembly.

    Evidence Gene knockout in DT40 cells, siRNA in HeLa cells, electron microscopy and live imaging

    PMID:19620631

    Open questions at the time
    • Molecular basis of CENP-S/X recruitment to centromeric chromatin was unknown
    • Functional relationship to DNA repair had not been examined
  2. 2010 High

    Demonstrating that CENP-S/CENP-X form a histone-fold heterodimer that binds DNA and stimulates FANCM branch migration, while being required for FANCD2 activation, revealed a second, mechanistically distinct role for this complex in Fanconi anemia–mediated interstrand cross-link repair.

    Evidence Co-immunoprecipitation, in vitro DNA binding and branch migration reconstitution, siRNA knockdown with chromosome aberration analysis

    PMID:20347429

    Open questions at the time
    • Structural basis of DNA binding by the MHF complex was unresolved
    • Whether the centromere and DNA repair functions were molecularly separable was unknown
  3. 2013 Medium

    SAXS and crystallography defined the (MHF1–MHF2)₄ octameric architecture and a positively charged surface patch mediating DNA binding, while genetic epistasis in fission yeast proved that the centromere and DNA repair functions of CENP-S/X are molecularly separable—dependent on and independent of FANCM, respectively.

    Evidence SAXS/crystallography with DNA binding assays; fission yeast genetic epistasis, ChIP, live imaging

    PMID:23886707 PMID:24026537

    Open questions at the time
    • Mutational validation of the DNA-binding surface patch in vivo was limited
    • How CENP-S/X integrates into centromeric chromatin independently of FANCM remained unclear
  4. 2014 High

    Quantitative biophysical measurements in living human cells showed that CENP-S/X assemble de novo at centromeres during S/G2 with 3–4-fold enrichment and that CENP-T is the primary centromeric binding partner, resolving the timing and molecular basis of centromere recruitment.

    Evidence FCCS, FRET, FRAP, and fluorescent two-hybrid in living human cells

    PMID:24522885

    Open questions at the time
    • Whether CENP-S/X occupies canonical H3 nucleosome positions or a distinct binding site was not resolved
    • Stoichiometry of the CENP-S/X/T complex at individual centromeres was undefined
  5. 2018 Medium

    Finding that CENP-S/X do not co-migrate with other CCAN subcomplexes in the nucleoplasm established that they exist as an independent soluble pool, clarifying the assembly pathway by which CENP-S/X are delivered to centromeres.

    Evidence FCCS apparent Kd measurements in living human interphase cells

    PMID:29509805

    Open questions at the time
    • What triggers the S/G2-specific recruitment of the soluble CENP-S/X pool to centromeres is unknown
    • Whether the soluble pool also services the DNA repair function was not tested
  6. 2023 Medium

    Showing that loss of MHF2 (CENP-X ortholog) attenuates the spindle assembly checkpoint and disrupts kinetochore localization of most CCAN components and Aurora B extended the kinetochore role of CENP-S/X beyond structural support to checkpoint signaling.

    Evidence Live-cell microscopy and yeast genetics in fission yeast

    PMID:36537249

    Open questions at the time
    • Whether CENP-S/X directly recruits SAC components or acts indirectly through CCAN integrity is unresolved
    • Relevance of the SAC phenotype in mammalian cells has not been tested
  7. 2025 Medium

    Demonstrating rapid recruitment of CENP-S/X to DNA double-strand breaks (~100 s) across all cell cycle phases, dependent on ATM and RNF8/RNF168, placed this complex at DSBs during early chromatin remodeling associated with repair pathway choice, broadening its DNA damage role beyond ICL repair.

    Evidence Live-cell microirradiation, FRAP, cell cycle enrichment in HeLa cells

    PMID:40450933

    Open questions at the time
    • Whether CENP-S/X recruitment to DSBs requires FANCM or is FANCM-independent has not been determined
    • Functional consequence of CENP-S/X loss specifically at DSBs (as opposed to ICLs) is not established

Open questions

Synthesis pass · forward-looking unresolved questions
  • How the soluble CENP-S/X pool is allocated between centromere assembly, ICL repair, and DSB repair, and what signals direct pool partitioning across cell cycle phases, remains an open mechanistic question.
  • No reconstitution of CENP-S/X integration into centromeric nucleosomes in the context of CENP-T
  • Structural basis of CENP-S/X interaction with CENP-T is lacking
  • Whether CENP-S post-translational modifications regulate functional partitioning is unknown

Mechanism profile

Synthesis pass · controlled-vocabulary classification · explore literature graph →
Molecular activity
GO:0003677 DNA binding 2 GO:0005198 structural molecule activity 2 GO:0042393 histone binding 1
Localization
GO:0005694 chromosome 3 GO:0005654 nucleoplasm 1
Pathway
R-HSA-1640170 Cell Cycle 3 R-HSA-73894 DNA Repair 3
Complex memberships
CENP-S–CENP-X (MHF1–MHF2) histone-fold heterodimerCENP-S–CENP-X–CENP-T centromere complexMHF–FANCM complex

Evidence

Reading pass · 8 per-paper findings extracted from the source corpus
Year Finding Method Journal Conf PMIDs
2009 CENP-S forms a subcomplex with CENP-X at the kinetochore; kinetochore localization of CENP-S and CENP-X depends on CENP-T and CENP-K; loss of CENP-S/X reduces the size of the outer kinetochore plate and increases intrakinetochore distance, indicating CENP-S/X is required for stable outer kinetochore assembly. Gene knockout (DT40 cells), siRNA depletion (HeLa cells), live cell imaging, immunofluorescence, electron microscopy The Journal of cell biology High 19620631
2010 CENP-S (MHF1) and CENP-X (MHF2) form a histone-fold heterodimer that binds DNA and enhances the DNA branch migration activity of FANCM; MHF1 knockdown destabilizes FANCM and MHF2, impairs FANCD2 monoubiquitination and foci formation, prevents chromatin localization of FA nuclear core complex proteins, and increases MMC-induced chromosome aberrations. Co-immunoprecipitation, siRNA knockdown, in vitro DNA binding and branch migration assays, immunofluorescence, chromosome aberration analysis Molecular cell High 20347429
2013 Solution SAXS analysis revealed that the (MHF1-MHF2)4 octamer exposes a long positively charged surface patch that mediates double-stranded DNA binding and anchors the MHF-FANCM complex to chromatin. Small angle X-ray scattering (SAXS), crystallography, DNA binding assays FEBS letters Medium 23886707
2013 In fission yeast, Mhf1/CENP-S and Mhf2/CENP-X perform distinct roles: their DNA repair/recombination function requires interaction with the FANCM orthologue Fml1, while their centromere localization and promotion of chromosome segregation are independent of Fml1, demonstrating the two functions are separable. Genetic epistasis, fission yeast mutant analysis, live cell imaging, chromatin immunoprecipitation Open biology Medium 24026537
2014 CENP-S (MHF1) and CENP-X (MHF2) assemble de novo at centromeres during S phase and G2, increasing ~3–4-fold in abundance; FRET confirmed CENP-S/X remain in proximity at centromeres; fluorescent two-hybrid and FRET identified CENP-T as the strongest CENP-S binding partner; CENP-S, CENP-X and CENP-T form a centromere-bound complex in proximity to histone H3 but not CENP-A. Fluorescence cross-correlation spectroscopy (FCCS), FRET, FRAP, fluorescent two-hybrid, conditional labelling Open biology High 24522885
2018 FCCS measurements in living human interphase cells showed that CENP-S/X do not co-migrate with the CENP-C/H/I/K/M/T/W/N/L complex in the nucleoplasm outside centromeres, in contrast to other CCAN members, indicating CENP-S/X form an independent soluble complex. Fluorescence cross-correlation spectroscopy (FCCS) in living human cells, apparent Kd determination PloS one Medium 29509805
2023 In fission yeast, Mhf1-Mhf2 (CENP-S/X ortholog) promotes spindle assembly checkpoint (SAC) signaling; loss of Mhf2 attenuates the SAC, impairs kinetochore localization of most CCAN components, and alters Aurora B (Ark1) localization at the kinetochore. Live-cell microscopy, yeast genetics, immunofluorescence localization Journal of cell science Medium 36537249
2025 In live HeLa cells, CENPS and CENPX are recruited to DNA double-strand breaks with a half-time of ~100 s (simultaneously after ATM activation and RNF8-RNF168 activity) and are removed with a half-time of ~2000 s; recruitment occurs in G1, S, and G2, with stronger/delayed recruitment in G2, temporally placing CENPS/CENPX at DSBs during early chromatin remodeling associated with pathway choice and resection. Live-cell microirradiation, fluorescence microscopy, FRAP, cell cycle phase enrichment DNA repair Medium 40450933

Source papers

Stage 0 corpus · 21 papers · ranked by NIH iCite citations
Year Title Journal Citations PMID
2010 MHF1-MHF2, a histone-fold-containing protein complex, participates in the Fanconi anemia pathway via FANCM. Molecular cell 166 20347429
2011 The ABCs of CENPs. Chromosoma 164 21751032
2009 The CENP-S complex is essential for the stable assembly of outer kinetochore structure. The Journal of cell biology 127 19620631
2014 FANCM-associated proteins MHF1 and MHF2, but not the other Fanconi anemia factors, limit meiotic crossovers. Nucleic acids research 84 25038251
2011 Premitotic assembly of human CENPs -T and -W switches centromeric chromatin to a mitotic state. PLoS biology 63 21695110
2015 Discovering centromere proteins: from cold white hands to the A, B, C of CENPs. Nature reviews. Molecular cell biology 47 25991376
2013 MHF1-2/CENP-S-X performs distinct roles in centromere metabolism and genetic recombination. Open biology 28 24026537
2014 A CENP-S/X complex assembles at the centromere in S and G2 phases of the human cell cycle. Open biology 24 24522885
2014 MHF1 plays Fanconi anaemia complementation group M protein (FANCM)-dependent and FANCM-independent roles in DNA repair and homologous recombination in plants. The Plant journal : for cell and molecular biology 24 24635147
2022 PLLA-gelatin composite fiber membranes incorporated with functionalized CeNPs as a sustainable wound dressing substitute promoting skin regeneration and scar remodeling. Journal of materials chemistry. B 15 35103745
2004 A novel 1p36.2 located gene, APITD1, with tumour-suppressive properties and a putative p53-binding domain, shows low expression in neuroblastoma tumours. British journal of cancer 15 15328517
2018 CENP-C/H/I/K/M/T/W/N/L and hMis12 but not CENP-S/X participate in complex formation in the nucleoplasm of living human interphase cells outside centromeres. PloS one 11 29509805
2019 Temporal Distribution Patterns of Alexa Fluor 647-Conjugated CeNPs in the Mouse Retina After a Single Intravitreal Injection. Advances in experimental medicine and biology 6 31884600
2013 Structural peculiarities of the (MHF1-MHF2)4 octamer provide a long DNA binding patch to anchor the MHF-FANCM complex to chromatin: a solution SAXS study. FEBS letters 5 23886707
2023 The fission yeast kinetochore complex Mhf1-Mhf2 regulates the spindle assembly checkpoint and faithful chromosome segregation. Journal of cell science 4 36537249
2023 FANCM interacts with the MHF1-MHF2 complex to limit crossover frequency during rice meiosis. The Plant journal : for cell and molecular biology 4 37632767
2022 hsa_circ_0077837 Alleviated the Malignancy of Non-Small Cell Lung Cancer by Regulating the miR-1178-3p/APITD1 Axis. Journal of oncology 4 35310916
2016 CENPs and Sweet Nucleosomes Face the FACT. Trends in biochemical sciences 4 27499233
2025 Dynamics of chromatin factors RSF1, CENPS and CENPX at DNA damage sites. DNA repair 1 40450933
2025 RETRACTION: hsa_circ_0077837 Alleviated the Malignancy of Non-Small Cell Lung Cancer by Regulating the miR-1178-3p/APITD1 Axis. Journal of oncology 0 41246146
2025 CENPs in hepatocellular carcinoma: a comprehensive review of expression patterns, clinical correlations, and functional mechanisms. American journal of cancer research 0 41395289