Affinage

CENPL

Centromere protein L · UniProt Q8N0S6

Length
344 aa
Mass
39.0 kDa
Annotated
2026-06-09
20 papers in source corpus 9 papers cited in narrative 9 extracted findings
Cross-family judge vs UniProt: Affinage preferred faithfulness: 5/5 claims corpus-supported (100%)

Mechanistic narrative

Synthesis pass · prose summary of the discoveries below

CENPL encodes a constitutive centromere-associated network (CCAN) protein recruited to CENP-A nucleosomes as a CENP-A-nucleosome distal component of the NAC, where its disruption causes chromosome alignment and segregation failures incompatible with cell survival (PMID:16622419). CENPL functions as a scaffolding hub: it binds CENP-N and, together with CENP-K, mediates docking of the CENP-PORQU sub-complex to the CCAN (PMID:23028590), and it co-migrates with CENP-K within a soluble nucleoplasmic CCAN complex outside centromeres (PMID:29509805). At the kinetochore, CENPL is required for kinetochore microtubule stability, homogeneous poleward microtubule flux, and the kinetochore pushing force driving centrosome separation, such that its loss produces syntelic and merotelic attachments (PMID:22399803). Recruitment of the CENP-LN module is gated by cell cycle-dependent phosphorylation of both CENPL and CENP-N, with cycles of phosphorylation and dephosphorylation required for proper centromere localization and CCAN reorganization (PMID:35830614). Beyond its kinetochore role, CENPL is a transcriptional target acting downstream of E2F8 in homologous recombination repair of double-strand breaks and chemoresistance (PMID:38522807) and downstream of a KDM1A→ZFP64 epigenetic axis in cancer (PMID:39628712).

Mechanistic history

Synthesis pass · year-by-year structured walk · 9 steps
  1. 2006 High

    Established that CENPL is a bona fide centromere protein by placing it within the CENP-A nucleosome-associated complex and showing its loss abolishes faithful chromosome segregation.

    Evidence AP-MS of CENP-A nucleosome complexes plus RNAi depletion with mitotic phenotype readout in human cells

    PMID:16622419

    Open questions at the time
    • Did not resolve which CCAN partners directly contact CENPL
    • Molecular basis of the segregation defect not defined
  2. 2012 High

    Defined the specific mechanical contribution of CENPL by linking it to kinetochore microtubule stability, flux, and pushing force, explaining why its loss yields erroneous attachments.

    Evidence siRNA depletion with live-cell imaging quantifying centrosome separation, microtubule flux, and attachment geometry in human cells

    PMID:22399803

    Open questions at the time
    • Does not establish whether these defects are direct or downstream of CCAN disassembly
    • No structural mechanism for force generation
  3. 2012 Medium

    Positioned CENPL as a scaffold by mapping it as the CENP-N binding partner that, with CENP-K, recruits the CENP-PORQU sub-complex to the CCAN.

    Evidence Fluorescent three-hybrid, FRET, and co-immunoprecipitation interaction mapping in mammalian cells

    PMID:23028590

    Open questions at the time
    • Interaction interfaces not resolved at residue level
    • Single lab; affinities not quantified
  4. 2013 Medium

    Provided structural and biochemical insight via the yeast ortholog, revealing an elongated Iml3 fold, heterodimerization with the Chl4 (CENP-N) C-terminus, and low-affinity DNA binding by the heterodimer.

    Evidence X-ray crystallography of Iml3, pull-down domain mapping, and in vitro DNA-binding assays in yeast

    PMID:24311582

    Open questions at the time
    • Not directly demonstrated for human CENPL
    • Functional relevance of DNA binding in cells untested
  5. 2018 Medium

    Showed that CENPL exists in a preassembled soluble CCAN pool, indicating complex formation precedes centromere docking.

    Evidence Fluorescence cross-correlation spectroscopy in living human interphase cells

    PMID:29509805

    Open questions at the time
    • Stoichiometry of the soluble complex not determined
    • Single method, single lab
  6. 2022 High

    Identified the regulatory logic of CENPL recruitment, showing phosphorylation cycles on CENPL and CENP-N control CENP-LN complex formation and centromere localization across the cell cycle.

    Evidence Phosphomimetic and phospho-null mutagenesis with live-cell imaging and chromosome segregation assays

    PMID:35830614

    Open questions at the time
    • Responsible kinases and phosphatases not identified
    • Phosphosite occupancy in vivo not quantified
  7. 2023 Low

    Reported a non-canonical role linking CENPL to MEK1/2-ERK1/2 signaling driving proliferation and glycolysis in hepatocellular carcinoma.

    Evidence Overexpression/knockdown plus MEK/ERK inhibitor treatment with proliferation and glycolysis assays in HCC cells

    PMID:37914022

    Open questions at the time
    • No direct CENPL-MEK interaction demonstrated; pharmacological inference only
    • Single lab, not independently confirmed
    • Mechanistic connection to kinetochore role unclear
  8. 2024 Medium

    Placed CENPL downstream of E2F8 in homologous recombination repair and chemoresistance via a rescue epistasis relationship.

    Evidence Knockdown/overexpression of CENPL and E2F8 with HR repair and chemosensitivity assays in breast cancer cells

    PMID:38522807

    Open questions at the time
    • Molecular mechanism by which CENPL promotes HR not defined
    • Single lab
  9. 2024 Medium

    Established transcriptional control of CENPL by a KDM1A→ZFP64 epigenetic axis driving ovarian cancer growth.

    Evidence ChIP for H3K9me2 at the ZFP64 promoter, knockdown/overexpression epistasis, and in vivo xenograft rescue

    PMID:39628712

    Open questions at the time
    • Direct ZFP64 binding at the CENPL promoter not shown
    • Downstream effector function of CENPL in this context unresolved

Open questions

Synthesis pass · forward-looking unresolved questions
  • How the kinetochore scaffolding role of CENPL mechanistically connects to its reported roles in HR repair, signaling, and cancer transcriptional programs remains unresolved.
  • No unifying mechanism linking centromere function to DNA repair/proliferation roles
  • Kinases regulating CENP-LN phosphorylation unidentified
  • No human structural model of the CENPL-CENP-N interface

Mechanism profile

Synthesis pass · controlled-vocabulary classification · explore literature graph →
Molecular activity
GO:0060090 molecular adaptor activity 3
Localization
GO:0005694 chromosome 2 GO:0005654 nucleoplasm 1
Pathway
R-HSA-1640170 Cell Cycle 3
Complex memberships
CENP-A nucleosome-associated complex (NAC/CCAN)CENP-LN complex

Evidence

Reading pass · 9 per-paper findings extracted from the source corpus
Year Finding Method Journal Conf PMIDs
2006 CENP-L (CENPL) is a component of the CENP-A nucleosome-associated complex (NAC) at human centromeres. CENP-A nucleosomes directly recruit the NAC, and CENP-L is identified as one of seven CENP-A-nucleosome distal (CAD) components assembling on the NAC. Disruption of the NAC causes chromosome alignment and segregation errors that preclude cell survival. Affinity purification / mass spectrometry (AP-MS) of CENP-A nucleosome complexes; RNAi depletion with mitotic phenotype readout Nature Cell Biology High 16622419
2012 CENPL is essential for the stability of kinetochore microtubules, for a homogeneous poleward microtubule flux rate, and for the kinetochore pushing force that accelerates centrosome separation in prometaphase. CENP-L depletion causes massive chromosome alignment and segregation defects due to syntelic and merotelic kinetochore-microtubule attachments. siRNA depletion of CENP-L in human cells; live-cell imaging and quantitative measurement of centrosome separation kinetics, microtubule flux, and kinetochore-microtubule attachment geometry Journal of Cell Science High 22399803
2012 CENP-P/O/R/Q/U sub-complex binding to the CCAN is largely mediated through interactions with CENP-L (as the CENP-N binding partner) and CENP-K. CENP-L thus acts as a hub connecting the CENP-N module to the CENP-PORQU sub-complex. Fluorescent three-hybrid (F3H) assay, FRET in living mammalian cells, and co-immunoprecipitation to map protein-protein interactions PloS One Medium 23028590
2018 CENP-L co-migrates with CENP-K in the nucleoplasm outside centromeres in living human interphase cells, demonstrating that CENP-L and CENP-K form part of a soluble CENP-C/H/I/K/M/T/W/N/L complex in the nucleoplasm independently of centromere binding. Fluorescence cross-correlation spectroscopy (FCCS) in living human interphase cells PloS One Medium 29509805
2022 Phosphorylation of CENP-L and CENP-N controls CENP-LN complex formation and centromere localization in a cell cycle-dependent manner. Mimicking constitutive phosphorylation of either CENP-L or CENP-N, or simultaneously preventing phosphorylation of both, prevents CENP-LN localization and disrupts chromosome segregation. Cycles of phosphorylation and dephosphorylation are critical for CENP-LN complex recruitment and CCAN reorganization across the cell cycle. Phosphomimetic and phospho-null mutagenesis of CENP-L and CENP-N; live-cell imaging; chromosome segregation assays Molecular Biology of the Cell High 35830614
2013 The yeast CENP-L ortholog Iml3 adopts an elongated conformation with intramolecular interactions (crystal structure resolved). Its binding partner Chl4 (CENP-N ortholog) C-terminal domain forms a dimer and is responsible for Iml3 binding. The Chl4-Iml3 heterodimer exhibits low-affinity nonspecific DNA-binding activity, potentially relevant to kinetochore assembly. X-ray crystallography of Iml3; pull-down assays mapping Chl4-Iml3 interaction domains; in vitro DNA-binding assays Acta Crystallographica Section D Medium 24311582
2024 CENPL is a transcriptional target of E2F8 and mediates E2F8's role in homologous recombination (HR) repair of DNA double-strand breaks and chemoresistance. CENPL overexpression in E2F8-knockdown cells partially rescued HR repair and chemotherapy sensitivity; CENPL knockdown alone impaired HR repair and sensitized cells to DNA-damaging drugs. siRNA knockdown and overexpression of CENPL and E2F8; HR repair assays; chemosensitivity assays in breast cancer cells; transcriptional target validation Cellular Signalling Medium 38522807
2023 CENPL activates the MEK1/2-ERK1/2 signaling pathway to promote cell proliferation and glycolysis in hepatocellular carcinoma cells. Pathway inhibition of MEK1/2-ERK1/2 reversed the effects of CENPL overexpression. CENPL overexpression and knockdown in HCC cells; MEK/ERK pathway inhibitor treatment; proliferation and glycolysis assays; western blotting for MAPK pathway components The International Journal of Biochemistry & Cell Biology Low 37914022
2024 KDM1A promotes epithelial ovarian cancer progression through a KDM1A→ZFP64→CENPL transcriptional axis: KDM1A demethylates H3K9me2 at the ZFP64 promoter to activate ZFP64, which in turn activates CENPL transcription. CENPL re-expression rescued tumor growth suppressed by ZFP64 knockdown in vivo. Chromatin immunoprecipitation (ChIP) for H3K9me2 at ZFP64 promoter; knockdown/overexpression epistasis; in vivo xenograft rescue experiment Cytotechnology Medium 39628712

Source papers

Stage 0 corpus · 20 papers · ranked by NIH iCite citations
Year Title Journal Citations PMID
2006 The human CENP-A centromeric nucleosome-associated complex. Nature cell biology 594 16622419
2012 Kinetochores accelerate centrosome separation to ensure faithful chromosome segregation. Journal of cell science 39 22399803
2011 Distinctive phenotype in 9 patients with deletion of chromosome 1q24-q25. American journal of medical genetics. Part A 34 21548129
2012 Step-wise assembly, maturation and dynamic behavior of the human CENP-P/O/R/Q/U kinetochore sub-complex. PloS one 33 23028590
2014 Identifying novel oncogenes: a machine learning approach. Interdisciplinary sciences, computational life sciences 17 24402816
2013 Pituitary deficiency and congenital infiltrating lipomatosis of the face in a girl with deletion of chromosome 1q24.3q31.1. American journal of medical genetics. Part A 14 24311370
2022 Dynamic cell cycle-dependent phosphorylation modulates CENP-L-CENP-N centromere recruitment. Molecular biology of the cell 13 35830614
2018 CENP-C/H/I/K/M/T/W/N/L and hMis12 but not CENP-S/X participate in complex formation in the nucleoplasm of living human interphase cells outside centromeres. PloS one 11 29509805
2021 The roles of the cell division cycle-associated gene family in hepatocellular carcinoma. Journal of gastrointestinal oncology 9 34012666
2024 E2F8-CENPL pathway contributes to homologous recombination repair and chemoresistance in breast cancer. Cellular signalling 8 38522807
2013 Structural insights into the role of the Chl4-Iml3 complex in kinetochore assembly. Acta crystallographica. Section D, Biological crystallography 8 24311582
2023 CENPL accelerates cell proliferation, cell cycle, apoptosis, and glycolysis via the MEK1/2-ERK1/2 pathway in hepatocellular carcinoma. The international journal of biochemistry & cell biology 6 37914022
2016 Nine year old boy with chromosome 1q23.3-q25.1 deletion. American journal of medical genetics. Part A 5 27416976
1979 A cytogenetic survey of an institution for the metnally retarded. III. Q-Band chromosome heteromorphisms. Human genetics 5 574496
2023 Delineation of the CENP-LN sub-complex dissociation mechanism upon multisite phosphorylation during mitosis. Journal of biomolecular structure & dynamics 4 37605944
2026 FOXM1 Signaling Network Transcriptionally Upregulates Expression of Proteins Involved in Mitotic Progression to Induce High Proliferation and Chromosomal Instability in Androgen Receptor-Low Triple-Negative Breast Cancer. International journal of molecular sciences 1 41751958
2024 KDM1A-mediated ZFP64 demethylation activates CENPL to promote epithelial ovarian cancer progression. Cytotechnology 1 39628712
2026 Functional characterization of porcine septin12 and its role in male reproduction. Animal bioscience 0 41927050
2025 Towards identification of a holocentromere marker in the lepidopteran model Spodoptera frugiperda. Chromosoma 0 40067534
2020 Loss of inner kinetochore genes is associated with the transition to an unconventional point centromere in budding yeast. PeerJ 0 33062452

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