| 2005 |
HP1γ (CBX3) is present in the transcribed region of all active genes examined in mammalian chromatin, and its presence there depends on elongation by RNA polymerase II, demonstrating a role for HP1γ in transcription elongation rather than solely in repression. |
Chromatin immunoprecipitation (ChIP) of HP1γ and H3K9 methylation marks at active gene bodies; RNA Pol II elongation inhibition experiments |
Molecular cell |
High |
16061184
|
| 2007 |
Suv39H1-mediated H3K9 trimethylation recruits HP1γ to the integrated HIV-1 LTR to establish chromatin-mediated transcriptional silencing and post-integration latency; HP1γ association is reversible and transcription-dependent, and HP1γ RNAi reactivates latent HIV-1. |
ChIP at HIV-1 LTR; siRNA knockdown of HP1γ with transcriptional reactivation readout; experiments in PBMCs from HIV-infected donors |
The EMBO journal |
High |
17245432
|
| 2008 |
On the HIV-1 LTR promoter, HP1β is present during transcriptional repression and is replaced by HP1γ upon activation; HP1γ localizes to both the promoter and coding region together with processive RNA Pol II, demonstrating an isoform-specific switch regulating transcriptional state. |
Sequential ChIP (ChIP-reChIP) at HIV-1 LTR at different transcriptional states; co-localization with Pol II CTD phosphorylation states |
EMBO reports |
High |
18239689
|
| 2009 |
HP1γ and cohesin are co-recruited to D4Z4 repeats in an H3K9me3-dependent and cell-type-specific manner; this recruitment is disrupted in FSHD, and cohesin plays an active role in HP1 recruitment at this locus. |
ChIP with D4Z4-specific primers in normal and FSHD patient cells and siRNA-treated cells; analysis of H3K9me3, HP1γ, and cohesin occupancy |
PLoS genetics |
High |
19593370
|
| 2010 |
HP1γ (Cbx3) is required for male germ cell survival and spermatogenesis; hypomorphic Cbx3 mice show loss of germ cells (Sertoli cell-only phenotype) and derepression of L1 retrotransposons (ORF1p expression), establishing a non-redundant role in transposon silencing during spermatogenesis. |
Gene-targeted mouse (hypomorphic Cbx3 allele); histological analysis; immunostaining for L1 ORF1 protein |
Epigenetics & chromatin |
High |
20423503
|
| 2010 |
JMJD2A/KDM4A and HP1γ antagonize each other during S phase: overexpression of HP1γ antagonizes JMJD2A-dependent S phase progression, and in C. elegans depletion of HPL-2 (HP1γ ortholog) rescues DNA replication defects caused by jmjd-2 loss, placing HP1γ as a conserved regulator of chromatin accessibility during DNA replication. |
Genetic epistasis in C. elegans (double mutants); mammalian cell overexpression/depletion with S phase progression assays; replication timing analysis |
Molecular cell |
High |
21145482
|
| 2010 |
In embryonic stem cells, HP1γ depletion slows the cell cycle and decreases resistance to differentiation-inducing conditions, and impairs endoderm but not neurectoderm or mesoderm differentiation, establishing a role for HP1γ in ESC self-renewal and lineage choice. |
RNA interference in mouse ESCs; functional assays (proliferation, differentiation); RT-qPCR and microarray |
PloS one |
Medium |
21085495
|
| 2011 |
HP1γ facilitates inclusion of alternative exons (e.g., CD44 variable exons) by reducing RNA Pol II elongation rate; additionally, HP1γ stabilizes association of pre-mRNA with chromatin, acting as a bridge between H3K9me3-marked chromatin and the maturing mRNA to influence splicing decisions. |
siRNA knockdown of HP1γ with splicing assays; ChIP; RNA immunoprecipitation; Pol II elongation rate measurements |
Nature structural & molecular biology |
High |
21358630
|
| 2011 |
HP1γ is required for meiotic synapsis in mice: Cbx3-deficient spermatocytes show impaired centromere clustering and synapsis; H3K9me2 at pericentric heterochromatin depends on Suv39h1-mediated H3K9me3 recognition by HP1γ, placing HP1γ downstream of Suv39h1 in a pathway with G9a for meiotic chromosome pairing. |
Cbx3-deficient mouse generation; comparative analysis with Suv39h1/h2- and G9a-deficient spermatocytes; immunofluorescence of meiotic chromosomes |
Development (Cambridge, England) |
High |
21896631
|
| 2011 |
HP1γ cooperates with histone variant H3.3 for heat-shock-induced HSP70 transcription: H3.3 knockdown prevents stable HP1γ recruitment to HSP70 promoters, and HP1γ knockdown reduces H3.3 levels at promoters; HP1γ selectively recognizes specific modification states of H3.3. |
siRNA knockdown of H3.3 or HP1γ; ChIP at HSP70 promoter; luciferase reporter assays |
Nucleic acids research |
Medium |
21742762
|
| 2012 |
Genome-wide CBX3 binding at gene bodies correlates with transcriptional activity; CBX3 depletion causes accumulation of unspliced nascent transcripts and defective recruitment of splicing factors (SNRNP70), establishing a role for CBX3 in efficient co-transcriptional RNA processing. |
Genome-wide ChIP-seq (CBX3 localization); CBX3 knockdown with RNA-seq for nascent transcript analysis; ChIP for SNRNP70 recruitment |
Genome research |
High |
22684280
|
| 2012 |
The Cbx3 chromodomain binds methylated histone H1K26me2 and G9aK185me3 with affinities comparable to H3K9me3; crystal structures of the human Cbx3 chromodomain in complex with H1K26me2 and G9aK185me3 peptides reveal a conserved binding mechanism, extending the binding repertoire of Cbx3 beyond H3K9me3. |
In vitro binding assays; X-ray crystallography of Cbx3 chromodomain–peptide complexes |
PloS one |
High |
22514736
|
| 2012 |
HP1γ interacts with BRCA1 and represses BRCA1-mediated transcription through modulation of promoter occupancy; BRCA1-HP1γ interaction (not methylated histone binding) is required for repression; after DNA damage, promoter-bound HP1γ is disassembled and BRCA1 is recruited, after which HP1γ/SUV39H1 are restored via BRCA1-HP1γ interaction to repress transcription in the recovery phase. |
Co-IP of HP1γ and BRCA1; ChIP time-lapse studies; HP1γ mutant analysis; siRNA for histone methyltransferases |
Nucleic acids research |
Medium |
23074186
|
| 2013 |
Aurora A kinase phosphorylates HP1γ at serine 83 (Ser83) during G2/M phase; HP1γ knockdown causes mitotic aberrations that can be rescued by wild-type HP1γ but not by nonphosphorylatable S83A-HP1γ; the phosphomimetic S83D mutant increases DNA synthesis (EdU incorporation) while S83A abrogates it, establishing Aurora A–HP1γ as a mitotic pathway. |
Kinase assay; site-directed mutagenesis (S83A and S83D mutants); siRNA rescue experiments; EdU incorporation; genome-wide expression profiling |
Epigenetics & chromatin |
High |
23829974
|
| 2014 |
Shigella effector OspF (a phosphothreonine lyase) inactivates ERK and consequently MSK1, a novel HP1γ kinase that phosphorylates HP1γ at S83 within an MSK1-HP1γ complex; this blocks HP1γ accumulation on target genes and broadly reprograms host transcription including immune and proliferative genes. |
Identification of MSK1 as HP1γ kinase by Co-IP; phosphorylation assays; genome-wide transcriptome analysis; OspF mutant Shigella in guinea pig model |
The EMBO journal |
High |
25216677
|
| 2015 |
HP1γ binding to tri-methylated H3K9 in reconstituted tetranucleosomes requires nucleosome compaction (induced by Mg2+ or linker histone H1); the hinge region connecting the chromodomain and chromoshadow domain mediates this distinction from HP1α; HP1γ but not HP1α shows strongly enhanced selective binding under compacted nucleosome conditions. |
In vitro reconstituted tetranucleosome binding assays with HP1α and HP1γ; Mg2+/H1-induced compaction; hinge region mutant analysis |
Nucleic acids research |
High |
26319017
|
| 2017 |
Cbx3 binds to gene promoters upon ESC-to-NPC differentiation and recruits Mediator subunit Med26; RNAi knockdown of either Cbx3 or Med26 inhibits neural differentiation and up-regulates mesodermal genes, establishing a Cbx3–Med26 axis that enforces neural lineage specification. |
ChIP at gene promoters; co-IP of Cbx3 and Med26; RNAi knockdown of Cbx3 and Med26 with lineage marker readouts |
Genes & development |
High |
28270516
|
| 2017 |
HP1γ (CBX3) and its H3K9me-binding (chromodomain) activity are required for lung adenocarcinoma cell proliferation, colony formation, and migration; HP1γ directly represses NCOR2 and ZBTB7A transcription, which in turn limits expression of proto-oncogenic ELK1 and AXL. |
In vivo K-RasG12D mouse model with HP1γ depletion; ChIP for HP1γ at NCOR2 and ZBTB7A promoters; chromodomain mutants; rescue by NCOR2/ZBTB7A knockdown |
Cancer research |
High |
29764865
|
| 2018 |
Cbx3 inhibits VSMC proliferation and migration by transcriptionally repressing Notch3; luciferase assays show Notch signaling but not β-catenin or NF-κB is regulated by Cbx3; overexpression of Cbx3 in injured carotid arteries reduces Notch3 expression and neointima formation, while Notch3 reactivation reverses the effects of Cbx3. |
Cbx3 overexpression/knockdown in VSMCs; luciferase reporter assays for Notch3, β-catenin, NF-κB; carotid wire-injury mouse model with local Cbx3 delivery |
Cardiovascular research |
High |
29206900
|
| 2018 |
CBX3 promotes aerobic glycolysis in pancreatic cancer cells by suppressing FBP1 expression; silencing FBP1 attenuates the decrease in glycolytic capacity caused by CBX3 knockdown, placing CBX3 upstream of FBP1 in a metabolic regulatory axis. |
CBX3 siRNA knockdown; glycolysis assays; FBP1 expression analysis; FBP1 rescue experiments |
Biochemical and biophysical research communications |
Medium |
29678579
|
| 2019 |
Peptidylarginine deiminase 4 (PAD4) citrullinates HP1γ at R38 and R39 within the chromodomain in mouse ESCs; this modification is enhanced by H3K9me3 peptides; citrullination (mimicked by R38/R39 mutations) reduces HP1γ binding to H3K9me3 peptides in vitro and decreases HP1γ residence time on chromatin in differentiating ESCs as measured by single-particle tracking. |
In vitro citrullination assay with PAD4; site-directed mutagenesis (R38/R39); peptide binding assays; live-cell single-particle tracking in mESCs |
Epigenetics & chromatin |
High |
30940194
|
| 2020 |
HPV E6 protein drives nuclear export of HP1γ through interaction between the NES sequence of HP1γ and exportin-1 (CRM-1); cytoplasmic HP1γ no longer suppresses UBE2L3, which then promotes E6-mediated p53 polyubiquitination and degradation; NES mutation retains HP1γ in the nucleus and reduces cervical cancer growth. |
Immunostaining showing cytoplasmic HP1γ in HPV+ cervical cancer; co-IP of HP1γ with exportin-1; leptomycin B nuclear retention; NES site-directed mutant; UBE2L3 expression assays; tumor xenograft |
Cell death and differentiation |
High |
32203172
|
| 2020 |
HP1γ, when nuclear, directly suppresses UBE2L3 expression; nuclear retention of HP1γ (by leptomycin B) or doxorubicin-induced DNA damage promotes HP1γ binding to the UBE2L3 promoter, stabilizes p53, and sensitizes cervical cancer cells to cisplatin. |
ChIP of HP1γ at UBE2L3 promoter; leptomycin B treatment; doxorubicin treatment; p53 stability assays |
International journal of molecular sciences |
Medium |
32825184
|
| 2020 |
Genic HP1γ colocalizes with and is required for H3K36me3 enrichment in ESCs; HP1γ-deleted ESCs show reduced H3K36me3 and decreased expression of shared target genes; the chromoshadow and hinge domains (not chromodomain H3K9me3 binding) are sufficient, because they retain interaction with NSD1, an H3K36 methyltransferase. |
HP1γ deletion in ESCs (ChIP-seq for H3K36me3 and H3K9me3); domain-swap/deletion mutants; Co-IP of HP1γ with NSD1 |
Nucleic acids research |
High |
33237287
|
| 2021 |
HP1γ binds hexameric RNA motifs and SINE-family transposable elements within introns via its RNA-binding activity; this tethers unspliced pre-mRNA to chromatin via intronic regions and limits usage of cryptic intronic splice sites, linking HP1γ RNA-binding to co-transcriptional splicing fidelity. |
RNA immunoprecipitation (RIP) followed by sequencing; identification of HP1γ-bound RNA motifs; genome-wide splicing analysis upon HP1γ loss |
EMBO reports |
High |
34312949
|
| 2021 |
Cbx3/HP1γ deficiency in CD8+ T cells leads to chromatin remodeling and enhanced expression of Prf1, Gzmb, and Ifng; Cbx3-insufficient CD8+ T cells show increased NKG2D+ effector cells and reduced Treg infiltration in tumors, establishing Cbx3 as a regulator of CD8+ T cell effector differentiation. |
Cbx3-insufficient mouse model; gene expression analysis; tumor infiltrating lymphocyte flow cytometry; in vivo tumor experiments |
Scientific reports |
Medium |
28220815
|
| 2021 |
CBX3 forms a complex with TRIM28, TRIM24, and RBBP4 to repress ARHGAP24 expression, increasing active Rac1 levels in lung adenocarcinoma cells exposed to smoking-associated stimuli. |
Co-IP of CBX3 with TRIM28/TRIM24/RBBP4; ChIP at ARHGAP24 promoter; Rac1 activity assays; CBX3 knockdown/overexpression |
Oncogene |
Medium |
34785774
|
| 2022 |
CBX3 accelerates GBM progression by suppressing the E3 ligases PARK2 and STUB1 at the transcriptional level through its chromodomain (CD), reducing ubiquitination and degradation of EGFR; additionally, the chromoshadow domain (CSD) of CBX3 interacts with PARK2 protein and promotes its ubiquitination/degradation. |
CBX3 domain mutants (CD, CSD); Co-IP of CBX3 with PARK2; ChIP at PARK2/STUB1 promoters; ubiquitination assays; EGFR stability assays; erlotinib rescue |
Oncogene |
Medium |
35459780
|
| 2023 |
HDAC1-mediated deacetylation of HP1γ at lysine 5 in bortezomib-resistant myeloma cells reduces ubiquitin-mediated HP1γ degradation; deacetylated HP1γ interacts with MDC1 to enhance DNA repair and nuclear condensation, increasing chromatin accessibility at target genes (CD40, FOS, JUN) governing proteasome inhibitor sensitivity. |
SILAC-based acetyl-proteomics; site-specific mutagenesis of K5; Co-IP of HP1γ with MDC1; HDAC1 inhibitor rescue; ATAC-seq/chromatin accessibility; in vitro and in vivo bortezomib resistance models |
Nature communications |
High |
36894562
|
| 2023 |
CGRP induces anxiety behavior by promoting HP1γ phosphorylation (at a site linked to gene silencing) in the dorsal hippocampus, leading to HP1γ recruitment to the Klf11 enhancer (shown by ChIP), enhanced KLF11 expression, increased MAOB levels, and decreased dopamine. |
Intracerebroventricular/intra-hippocampal CGRP administration; ChIP for HP1γ at Klf11 enhancer; MAOB activity assays; dopamine measurement; behavioral tests |
Communications biology |
Medium |
38503899
|
| 2023 |
PLK1 phosphorylates CBX3 to enhance its interaction with RB1; this CBX3–RB1 interaction releases E2F1, modulating sensitivity to CDK4/6 inhibitors in CRPC; BRD4 transcriptionally upregulates CBX3 expression. |
Co-IP of CBX3 with RB1; PLK1 kinase assay; BRD4 inhibitor effects on CBX3 expression; CDK4/6 inhibitor sensitivity assays |
Advanced science |
Medium |
37949681
|
| 2024 |
CBX3 binds lactylated histone and recruits histone acetyltransferase EP300, increasing EP300 substrate specificity toward lactyl-CoA; this drives immunosuppressive transcriptional programs including CD47 upregulation. CBX3 does not possess direct lactyltransferase activity itself. |
Co-IP of CBX3 with EP300; lactyl-CoA substrate assays; CBX3 knockdown with transcriptional and phagocytosis readouts; in vitro and in vivo tumor models |
The Journal of clinical investigation |
Medium |
39545414
|
| 2024 |
CBX3 binds RPA2 and is recruited to stalled replication forks by RPA2; CBX3 inhibits RFWD3-facilitated replication restart; CK2 phosphorylates CBX3 at serine-95, augmenting CDH1-mediated CBX3 degradation and permitting RPA2 dynamics and fork restart; elevated CBX3 sensitizes prostate cancer cells to PARP inhibitors. |
Co-IP of CBX3 with RPA2; in vitro CK2 kinase assay; replication fork assays; CDH1-mediated degradation assays; PARP inhibitor sensitivity in CBX3-overexpressing cells |
Science advances |
High |
38781342
|
| 2024 |
CBX3 (HP1γ) represses STAT1 and CD274 (PD-L1) by binding their promoters; IFNγ reduces CBX3 binding to these promoters; CBX3 deletion causes chronic colon inflammation with elevated STAT1 and PD-L1, and heightens CRC chemosensitivity under IFNγ stimulation. |
ChIP for CBX3 at STAT1 and CD274 promoters; CBX3 knockout mouse colon model; IFNγ treatment with CBX3 binding assays; in vivo syngeneic tumor model |
EMBO molecular medicine |
High |
38684864
|
| 2024 |
CBX3 directly binds the promoter of CUL3, suppressing CUL3 transcription and CUL3-mediated NRF2 degradation, thereby upregulating NRF2 protein and downstream GPX2, inhibiting ferroptosis and promoting multidrug resistance in colorectal cancer. |
ChIP of CBX3 at CUL3 promoter; NRF2/CUL3/GPX2 protein expression assays; ferroptosis assays; PDX tumor models; ML385 NRF2 inhibitor |
Oncogene |
Medium |
40089640
|
| 2025 |
SETDB1-mediated H3K9me3 recruits CBX3 to the SIRT4 promoter to repress SIRT4 expression; SETDB1 knockdown upregulates SIRT4, decreases PTEN, promotes autophagy, and protects against renal I/R injury in vivo. Co-IP confirmed SETDB1–CBX3 interaction; sequential ChIP confirmed co-occupancy at the SIRT4 promoter. |
ChIP-reChIP and Co-IP for SETDB1 and CBX3 at SIRT4 promoter; SETDB1 knockdown in vivo rat I/R injury model; autophagy (TEM) and PTEN expression assays |
FASEB journal |
Medium |
40197868
|
| 2025 |
The chromoshadow domain of HP1γ (HP1γCSD) interacts with the HP1 box of KAP1 and forms a dimer-of-dimers in an antiparallel arrangement (distinct from HP1αCSD parallel/concentration-dependent oligomerization); electrostatic interactions stabilize the HP1γCSD β-sheet interface, unlike the hydrophobic interface of HP1αCSD; in vivo rescue experiments in KAP1- and HP1-knockout ESCs demonstrate unique cooperative repression of lncRNA AI662270 by KAP1 and HP1γ but not other HP1s. |
X-ray crystallography; NMR; mass photometry of HP1γCSD-KAP1 Hbox complex; in vivo rescue in KAP1/HP1 knockout mESCs with lncRNA expression readout |
Cell reports |
High |
41575850
|
| 2025 |
TRIM66 interacts with HP1γ through a PxVxL motif; TRIM66–HP1γ co-undergoes liquid-liquid phase separation (LLPS) both in vitro and in vivo; the resulting condensates correlate with H3K9me3 sites and are associated with DNA damage response; HP1γ cannot phase-separate alone but does so cooperatively with TRIM66. |
Identification of PxVxL interaction; in vitro LLPS assay; in vivo condensate imaging; correlation with H3K9me3 by ChIP |
Biophysics reports |
Medium |
40070663
|
| 2000 |
HP1γ localizes to both euchromatin and heterochromatin compartments of interphase nuclei and to pericentromeric chromatin and arms of mitotic chromosomes; the amino-terminal epitope is selectively masked in non-replicative heterochromatin, explaining conflicting prior localizations; dual localization confirmed by GFP-HP1γ fusion. |
Immunocytochemistry with epitope-specific antibodies (N-terminal vs C-terminal); GFP-HP1γ fusion protein imaging; analysis across interphase and mitotic cells |
Cytogenetics and cell genetics |
Medium |
11124534
|
| 2017 |
HP1γ is present in both the nucleus and cytoplasm; in the cytoplasm it co-localizes with and co-immunoprecipitates with actin (both G- and F-actin forms) in myoblasts; nuclear HP1γ–actin complex associates with the promoter and transcribed regions of GAPDH (re-ChIP); HP1γ knockdown impairs myoblast differentiation. Nuclear export is CRM-1-dependent (blocked by leptomycin B). |
Confocal and immunoelectron microscopy; cellular fractionation; Co-IP of HP1γ with actin (± cytochalasin D); re-ChIP at GAPDH; HP1γ knockdown differentiation assay; leptomycin B treatment |
Biochimica et biophysica acta. Molecular cell research |
Medium |
29208528
|
| 2018 |
NGF-PKA signaling in differentiating PC12 cells decreases HP1γ association with silent heterochromatin, phosphorylates HP1γ at S83 via PKA, and ultimately leads to HP1γ degradation; elevated HP1γ antagonizes neuronal differentiation while its loss facilitates it. |
NGF treatment of PC12 cells; PKA kinase assay; heterochromatin association assays; gain- and loss-of-function (overexpression and RNAi); genome-wide expression profiling |
Scientific reports |
Medium |
30305677
|
| 2023 |
Loss of HP1γ in mouse embryonic fibroblasts downregulates TRF1 and other telomere-associated transcripts, increasing telomeric DNA-RNA hybrids (R-loops) and telomere replication stress (γH2AX), particularly on chromosomes 18 and X; this establishes a transcriptional control role for HP1γ in telomere maintenance. |
HP1γ-deficient MEFs; gene expression analysis; telomere FISH; immunofluorescence for γH2AX; DNA-RNA immunoprecipitation (DRIP) |
Life sciences |
Medium |
37598977
|
| 2018 |
HP1γ deletion in cardiac myocytes does not affect H3K9me3 levels but significantly reduces H4K20me3 levels; HP1β protein is upregulated and redistributes to perinuclear heterochromatin in HP1γ KO cardiomyocytes; HP1γ is dispensable for cell cycle exit and normal cardiac growth. |
Conditional CM-specific HP1γ knockout mouse (Nkx2.5-Cre); echocardiography; ChIP/immunostaining for H3K9me3 and H4K20me3; global transcriptome analysis |
Epigenetics & chromatin |
Medium |
29665845
|